| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871907
Identifier: 116871907
GI number: 116871907
Start: 524056
End: 525531
Strand: Direct
Name: 116871907
Synonym: lwe0487
Alternate gene names: NA
Gene position: 524056-525531 (Clockwise)
Preceding gene: 116871904
Following gene: 116871908
Centisome position: 18.62
GC content: 35.03
Gene sequence:
>1476_bases ATGACGGGGAAATTAAAATCCATTGGTACGTGGCTATGGCATCATCTAACACCGCAAATATTTGCGGTTATTTGTGTTTT TATTATAACGATGATAGCTCTTTTTATACCTCCTTATGTTGGTATGGCTGACAATGGGGACTTTTTTCGGATATTCTCAA GTAATGGTTTATTTGTTAATAATGCGCATTATGACGCGTTGCAATTTGGGCATTTTGTGAAAGAATTTGGGATTTATCAA TACTTTAATGAAAATCAAGTCGCTATATACTCGTCACAAAGTATTTTTATTCAGATGGCGATTCTTTTAAATAAGCTTTT TTGGTCGAGTACTGTTTTTGACGTGCGTTTTTTAGGTGGATTACAACTGGCACTTCTTTTGCCAGCTATTTATTTGTTAG TAGCAGGTTTAACGGTAAAAATGAAAGGCTGGTCGGGATATGTTGTTGCTGGGTTAACGGTGTTTATTTTTGCGGACACT GCTTATACAGCTTATTTTAACTCGTTTTTCAGTGAAGGACTTATTTTGATTATGATGCTGTATATTTCAGCAGGTTTTTT ACTTTTATATCAGCATAAATACAATGATTATGCGATGTTAGGCTTGATTTTTGTAGCCTCTCTCATTTTAATTACTGCTA AACAGCAAAATGCGCCGATTGCGGTTGTTATTGCGGTTTGCGGAATACTTGTGTTTTTTATTCGGAAAAACCGTGCATTT CGTATTTCTGCTGCGGCTACTTTTTTTGTTATTTTCTTAAGTGGAGTGGTGATGTACGCATTTATTCCTGGTGAATTTGT GACAATAAATCAGTATCAAACAATGACTCGCGGGGTGTTACTTGATTCAGAAAACCCAGAAAAATCACTTGAGGAAATGG GAATGAATTCTGAATTCGCTTTACTGAAAGGAACCAACTTTTACCAAAAGTACAAAATGGTAGATTTGGATTCTGAACTA ATGGAAAAGGAATTTTATCCTAATTATAATTTTGTAACGGTTTTAAGCTATTATTTGGAAAATCCAAAACAATTCGGGAA AATGCTTGATTTATCCGCGCAAAATAGTTTTTCGATAAGACCATTTGAGATGGGGAATTTTGAAAAAAATGCGGGTTATC GTTTTAAAGAGAAAACACACTTTTTCTCTGTTTATAGTGATGTAAAAGAAAAATTTGCTCCGGCGAAATTCAGCTTTTTA ATTTTATGGGCGCTTGTTTTTCTAATTAGTTATGGTATAAATGCGTTTAAACAGTTCAGGGAGAAGAATATTCGAGGGAC GCTTTTATTTGATTTAGTCGTCTTATTGATTGGTTCAGGATTCGCGGTGATTTTGGTGACAATAGTTGGAGACGGAGAAG CGGACTTAACAAAGCATAATTTCTTATTCAATGTTTGTTTTGATTTGACGATATTGATTGGTGCGGCTTCATTGCTGGAA GGATACTTGAAGAGAAGAGGTGAGCAGAATGCGTAA
Upstream 100 bases:
>100_bases AAATAAAACCATGGAAAAACTTACAACATTCTCGTATAATGAAGTGTAAATGTGTCTAATTTGTGAACTTAATTAGCGAG AATAAAAAGGGGATAGCAGC
Downstream 100 bases:
>100_bases AAAAATCGTTATAAGTATTCTGCTTGCATTCGTATTTTTTATAGTTAATGAACATCCTGTTACAGCAAAAGCAGATAATG ATGTGGTCGTTTTTTATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MTGKLKSIGTWLWHHLTPQIFAVICVFIITMIALFIPPYVGMADNGDFFRIFSSNGLFVNNAHYDALQFGHFVKEFGIYQ YFNENQVAIYSSQSIFIQMAILLNKLFWSSTVFDVRFLGGLQLALLLPAIYLLVAGLTVKMKGWSGYVVAGLTVFIFADT AYTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNAPIAVVIAVCGILVFFIRKNRAF RISAAATFFVIFLSGVVMYAFIPGEFVTINQYQTMTRGVLLDSENPEKSLEEMGMNSEFALLKGTNFYQKYKMVDLDSEL MEKEFYPNYNFVTVLSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKNAGYRFKEKTHFFSVYSDVKEKFAPAKFSFL ILWALVFLISYGINAFKQFREKNIRGTLLFDLVVLLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTILIGAASLLE GYLKRRGEQNA
Sequences:
>Translated_491_residues MTGKLKSIGTWLWHHLTPQIFAVICVFIITMIALFIPPYVGMADNGDFFRIFSSNGLFVNNAHYDALQFGHFVKEFGIYQ YFNENQVAIYSSQSIFIQMAILLNKLFWSSTVFDVRFLGGLQLALLLPAIYLLVAGLTVKMKGWSGYVVAGLTVFIFADT AYTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNAPIAVVIAVCGILVFFIRKNRAF RISAAATFFVIFLSGVVMYAFIPGEFVTINQYQTMTRGVLLDSENPEKSLEEMGMNSEFALLKGTNFYQKYKMVDLDSEL MEKEFYPNYNFVTVLSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKNAGYRFKEKTHFFSVYSDVKEKFAPAKFSFL ILWALVFLISYGINAFKQFREKNIRGTLLFDLVVLLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTILIGAASLLE GYLKRRGEQNA >Mature_490_residues TGKLKSIGTWLWHHLTPQIFAVICVFIITMIALFIPPYVGMADNGDFFRIFSSNGLFVNNAHYDALQFGHFVKEFGIYQY FNENQVAIYSSQSIFIQMAILLNKLFWSSTVFDVRFLGGLQLALLLPAIYLLVAGLTVKMKGWSGYVVAGLTVFIFADTA YTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNAPIAVVIAVCGILVFFIRKNRAFR ISAAATFFVIFLSGVVMYAFIPGEFVTINQYQTMTRGVLLDSENPEKSLEEMGMNSEFALLKGTNFYQKYKMVDLDSELM EKEFYPNYNFVTVLSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKNAGYRFKEKTHFFSVYSDVKEKFAPAKFSFLI LWALVFLISYGINAFKQFREKNIRGTLLFDLVVLLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTILIGAASLLEG YLKRRGEQNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55757; Mature: 55626
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKLKSIGTWLWHHLTPQIFAVICVFIITMIALFIPPYVGMADNGDFFRIFSSNGLFVN CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEE NAHYDALQFGHFVKEFGIYQYFNENQVAIYSSQSIFIQMAILLNKLFWSSTVFDVRFLGG CCCHHHHHHHHHHHHCCHHEEECCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHH LQLALLLPAIYLLVAGLTVKMKGWSGYVVAGLTVFIFADTAYTAYFNSFFSEGLILIMML HHHHHHHHHHHHHHCCCEEEECCCCCCHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHH YISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNAPIAVVIAVCGILVFFIRKNRAF HHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCE RISAAATFFVIFLSGVVMYAFIPGEFVTINQYQTMTRGVLLDSENPEKSLEEMGMNSEFA EEHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCEEECCCCHHHHHHHCCCCCCEE LLKGTNFYQKYKMVDLDSELMEKEFYPNYNFVTVLSYYLENPKQFGKMLDLSAQNSFSIR EEECCCHHHHEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCC PFEMGNFEKNAGYRFKEKTHFFSVYSDVKEKFAPAKFSFLILWALVFLISYGINAFKQFR CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHH EKNIRGTLLFDLVVLLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTILIGAASLLE HCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GYLKRRGEQNA HHHHHCCCCCC >Mature Secondary Structure TGKLKSIGTWLWHHLTPQIFAVICVFIITMIALFIPPYVGMADNGDFFRIFSSNGLFVN CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEE NAHYDALQFGHFVKEFGIYQYFNENQVAIYSSQSIFIQMAILLNKLFWSSTVFDVRFLGG CCCHHHHHHHHHHHHCCHHEEECCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHH LQLALLLPAIYLLVAGLTVKMKGWSGYVVAGLTVFIFADTAYTAYFNSFFSEGLILIMML HHHHHHHHHHHHHHCCCEEEECCCCCCHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHH YISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNAPIAVVIAVCGILVFFIRKNRAF HHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCE RISAAATFFVIFLSGVVMYAFIPGEFVTINQYQTMTRGVLLDSENPEKSLEEMGMNSEFA EEHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCEEECCCCHHHHHHHCCCCCCEE LLKGTNFYQKYKMVDLDSELMEKEFYPNYNFVTVLSYYLENPKQFGKMLDLSAQNSFSIR EEECCCHHHHEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCC PFEMGNFEKNAGYRFKEKTHFFSVYSDVKEKFAPAKFSFLILWALVFLISYGINAFKQFR CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHH EKNIRGTLLFDLVVLLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTILIGAASLLE HCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GYLKRRGEQNA HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA