| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871904
Identifier: 116871904
GI number: 116871904
Start: 520718
End: 521161
Strand: Direct
Name: 116871904
Synonym: lwe0484
Alternate gene names: NA
Gene position: 520718-521161 (Clockwise)
Preceding gene: 116871903
Following gene: 116871907
Centisome position: 18.5
GC content: 30.41
Gene sequence:
>444_bases ATGTACAGTAATAAGAAGGAAAAGGTCGTTTTTACACTGATTATGTGTTCTTTAATGATTTTATGTATGAGCTCTTATAA TATTTTTCTTGAAAATGGTATTGGTGCGAATTCTTTTATAATTATTTTAAAAGCATTTGTTCCGTTTCTTTTTATCGGAT TTTTATTAGACTTTTTTATTGTTGGGAAAATTGCGGCGCGACTGCAGTCTTTCTTAGTAAGTGAAGATGCTTCGAAATTT AAAAAGATTATTATGATGCAATTATTAATGGTTACATTTATGTGTGTGCTTATGTCGGCGCTTAGTTTAATTGTGAATCA AGGTGAATGGAGCCATCTAGGTGTTCTTATTTTACGCAATTATTTTGTCGCATTATTTTTGCAAATCTTTATTGTTTCCC CATTTGTTCGGTTAATTAGTCCGCGAATTTTTGCTCTTTTGTAA
Upstream 100 bases:
>100_bases CCGTTTTGCTTGGATTTCCGAGCAAAACTTTTTTTGTAACAAAATTGTCACTTACGAAGAATTTTTTTATTTGCTACGAT AGTTCTTTGGAGGTGAAATT
Downstream 100 bases:
>100_bases AAATAAAAAACGCTTAGTCGAGTTTTTGACCCGGCTAAGCGTTTTGTTATTTATGTTTGGCATGATAAGCATCGAGGGCA TCTTCTACCGTTTTCTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MYSNKKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFIIILKAFVPFLFIGFLLDFFIVGKIAARLQSFLVSEDASKF KKIIMMQLLMVTFMCVLMSALSLIVNQGEWSHLGVLILRNYFVALFLQIFIVSPFVRLISPRIFALL
Sequences:
>Translated_147_residues MYSNKKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFIIILKAFVPFLFIGFLLDFFIVGKIAARLQSFLVSEDASKF KKIIMMQLLMVTFMCVLMSALSLIVNQGEWSHLGVLILRNYFVALFLQIFIVSPFVRLISPRIFALL >Mature_147_residues MYSNKKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFIIILKAFVPFLFIGFLLDFFIVGKIAARLQSFLVSEDASKF KKIIMMQLLMVTFMCVLMSALSLIVNQGEWSHLGVLILRNYFVALFLQIFIVSPFVRLISPRIFALL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16783; Mature: 16783
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNKKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFIIILKAFVPFLFIGFLLDFFI CCCCHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGKIAARLQSFLVSEDASKFKKIIMMQLLMVTFMCVLMSALSLIVNQGEWSHLGVLILRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YFVALFLQIFIVSPFVRLISPRIFALL HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYSNKKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFIIILKAFVPFLFIGFLLDFFI CCCCHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGKIAARLQSFLVSEDASKFKKIIMMQLLMVTFMCVLMSALSLIVNQGEWSHLGVLILRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YFVALFLQIFIVSPFVRLISPRIFALL HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA