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The map label for this gene is nagC [C]

Identifier: 116871896

GI number: 116871896

Start: 508919

End: 509926

Strand: Direct

Name: nagC [C]

Synonym: lwe0476

Alternate gene names: 116871896

Gene position: 508919-509926 (Clockwise)

Preceding gene: 116871895

Following gene: 116871897

Centisome position: 18.08

GC content: 40.28

Gene sequence:

>1008_bases
ATGATGGCACTTCCTCGTGATTTAAAAGAACTAAATAAGAAAAATATTAAGTCAATTTTACGGCAACAAGGTGCGATGAC
GAAAGCGGAAATCGCTGATGTGACTGGGCTTAGTGTGGTGACTGTCAATAAGTTGATTCGGGATTTAACAGAAAGTGAAG
AGATTTTAGAACAAGATAATTCGGTGGCGACAGGCGGAAGAAGAGCGATTTCATATCAAATTAATCCTAATTATCAATTA
GTATTGGTTGTTAGTTTGCAGGAGAAATGGAAGAAAATTACGTATTCTTTTTCGGTTTTTAATTTGCTTGGTGAGCCAGA
ATTTGTAGAAGATATGTCTGGTGAGGACTTAGATATTACTGCGCTTAAACGGAATATTAAAGATCTTGTGTGCGCTTTTC
CTAAGATTTCTTGTATTGTTATGGGAGTTCCGGGTATTGAGATTGGCGGTAGACTGCGCGCGATGGACTTTCCATTACTT
TTAAATGTTCATTTGCGGGAAACAGTGGAAGCGGAAGTTAATTTACCGGTGTTGGTCGAAACGGATACGAATGCAGCGAT
TTTAGGATATAAAAATCGACCGGTTGAAGAGGAGAATATTGTGGGGCTTTATTATCCGGAGCGTTTTCCACCGGGTGCGG
GACTTCTGATGAATGGCGAGATTTTGAAAGGACGAAACGGTCTGGCTGGGGAGATTAAGCATATGCCGCTGCAGGTGGAC
TGGGATAACTTTGATTTTTCGGTGGATGAAATTAAAGCGCATATTCGAAAAATGGTGCTTCTCACGATGAGTTTTTATGA
TCCGGAAACGATTGTGTTATATACGAATTTTTACTTCGGACAAAAGGATTATACGGAGGAACTGACGGCGGAATTGAAGC
AAGTTTATCCGTATGCGACTTTGCCGAAAATTGTGTTATCACGCAAGTTTACGACAGATTATCGGATTGGTCTTCTGGCG
TTTGGGATTGATTATTTGGAGAATAATTTGACGGATTGGCGGATATAA

Upstream 100 bases:

>100_bases
GAGGTTCTTTTTTGTTTTGACAAATAGGTTCTGAGTGGTTAAAATGATATTAAATATAGTTTATAAAGTTTGTTTAATAA
CTTTGCGATTGGAGCGATTG

Downstream 100 bases:

>100_bases
CTTTGGAAAGAAAATGCTCTAGATTTTTAGAGCATTTTCTTTATTATTCAACAAAAAATTTTAAGTCTATGAAGAAAAGA
GTAATAAAATATAGTTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; ROK Family Transcriptional Regulator; ROK-Family Transcriptional Regulator; Transcriptional Repressor Of Xylose Operon; Cytoplasmic Protein; Rok Family Protein; Transcriptional Regulator/Sugar Kinase; Rok Family Transcriptional Repressor; Xylose Repressor Gene Putative; Sugar Metabolism Repressor; Transcriptional Repressor Of Nag Operon; Transcriptional Regulator XylR; Xylose Repressor; Transcriptional Repressor

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MMALPRDLKELNKKNIKSILRQQGAMTKAEIADVTGLSVVTVNKLIRDLTESEEILEQDNSVATGGRRAISYQINPNYQL
VLVVSLQEKWKKITYSFSVFNLLGEPEFVEDMSGEDLDITALKRNIKDLVCAFPKISCIVMGVPGIEIGGRLRAMDFPLL
LNVHLRETVEAEVNLPVLVETDTNAAILGYKNRPVEEENIVGLYYPERFPPGAGLLMNGEILKGRNGLAGEIKHMPLQVD
WDNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDYTEELTAELKQVYPYATLPKIVLSRKFTTDYRIGLLA
FGIDYLENNLTDWRI

Sequences:

>Translated_335_residues
MMALPRDLKELNKKNIKSILRQQGAMTKAEIADVTGLSVVTVNKLIRDLTESEEILEQDNSVATGGRRAISYQINPNYQL
VLVVSLQEKWKKITYSFSVFNLLGEPEFVEDMSGEDLDITALKRNIKDLVCAFPKISCIVMGVPGIEIGGRLRAMDFPLL
LNVHLRETVEAEVNLPVLVETDTNAAILGYKNRPVEEENIVGLYYPERFPPGAGLLMNGEILKGRNGLAGEIKHMPLQVD
WDNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDYTEELTAELKQVYPYATLPKIVLSRKFTTDYRIGLLA
FGIDYLENNLTDWRI
>Mature_335_residues
MMALPRDLKELNKKNIKSILRQQGAMTKAEIADVTGLSVVTVNKLIRDLTESEEILEQDNSVATGGRRAISYQINPNYQL
VLVVSLQEKWKKITYSFSVFNLLGEPEFVEDMSGEDLDITALKRNIKDLVCAFPKISCIVMGVPGIEIGGRLRAMDFPLL
LNVHLRETVEAEVNLPVLVETDTNAAILGYKNRPVEEENIVGLYYPERFPPGAGLLMNGEILKGRNGLAGEIKHMPLQVD
WDNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDYTEELTAELKQVYPYATLPKIVLSRKFTTDYRIGLLA
FGIDYLENNLTDWRI

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38052; Mature: 38052

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMALPRDLKELNKKNIKSILRQQGAMTKAEIADVTGLSVVTVNKLIRDLTESEEILEQDN
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
SVATGGRRAISYQINPNYQLVLVVSLQEKWKKITYSFSVFNLLGEPEFVEDMSGEDLDIT
CCCCCCCEEEEEEECCCEEEEEEEECHHHHHHHEEEEEEHHHCCCCHHHHHCCCCCEEHH
ALKRNIKDLVCAFPKISCIVMGVPGIEIGGRLRAMDFPLLLNVHLRETVEAEVNLPVLVE
HHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEEHHHHHHHCCCCCEEEE
TDTNAAILGYKNRPVEEENIVGLYYPERFPPGAGLLMNGEILKGRNGLAGEIKHMPLQVD
CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCEEEECCCCCCCCEEECCEEEE
WDNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDYTEELTAELKQVYPYAT
CCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCHH
LPKIVLSRKFTTDYRIGLLAFGIDYLENNLTDWRI
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMALPRDLKELNKKNIKSILRQQGAMTKAEIADVTGLSVVTVNKLIRDLTESEEILEQDN
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
SVATGGRRAISYQINPNYQLVLVVSLQEKWKKITYSFSVFNLLGEPEFVEDMSGEDLDIT
CCCCCCCEEEEEEECCCEEEEEEEECHHHHHHHEEEEEEHHHCCCCHHHHHCCCCCEEHH
ALKRNIKDLVCAFPKISCIVMGVPGIEIGGRLRAMDFPLLLNVHLRETVEAEVNLPVLVE
HHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEEHHHHHHHCCCCCEEEE
TDTNAAILGYKNRPVEEENIVGLYYPERFPPGAGLLMNGEILKGRNGLAGEIKHMPLQVD
CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCEEEECCCCCCCCEEECCEEEE
WDNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDYTEELTAELKQVYPYAT
CCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCHH
LPKIVLSRKFTTDYRIGLLAFGIDYLENNLTDWRI
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA