| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is isdG [H]
Identifier: 116871872
GI number: 116871872
Start: 487994
End: 488359
Strand: Direct
Name: isdG [H]
Synonym: lwe0452
Alternate gene names: 116871872
Gene position: 487994-488359 (Clockwise)
Preceding gene: 116871871
Following gene: 116871873
Centisome position: 17.34
GC content: 40.44
Gene sequence:
>366_bases ATGATTATTGTAACTAATACGATTAAGGTAGAAAAAGGCGCAGCAGAGCACGTGATTCGTCAGTTCACAGGCGCAAATGG CGACGGACATCCAACTAAAGATATCGCAGAAGTAGAAGGATTTCTGGGCTTCGAACTATGGCACAGTAAACCAGAAGACA AAGATTATGAAGAAGTAGTCGTTACAAGTAAATGGGAAAGCGAAGAAGCGCAACGCAATTGGGTAAAAAGTGATTCCTTC AAAAAAGCGCATGGTAGAACAAAAGACACAAGAGAACAAAGAGAAGATCGCAAAGGCATCGTAGGAAATGAAATTGCTCG TTTCGAAGTGGTTCATGTGCAAAATCCTGTGACTATTGAAAAATAA
Upstream 100 bases:
>100_bases AATCCCATTTTCCAACATTGACAATGAGAATCATTATCAATATAATGGAAGGAACAAGCCTATTATACATACAATACAAT TATCCAAGGGGGATTTAAGA
Downstream 100 bases:
>100_bases GAAGTGAGTGAACAAGCCGTTTCGAGGTAGATGGCTTGTTTTTTTGTGGCGCTTGAATTTTCAAATAATTATTGAATTTT TATATCTTATGCGGTATATT
Product: heme-degrading monooxygenase IsdG
Products: NA
Alternate protein names: Heme oxygenase; Iron-regulated surface determinant isdG; Iron-responsive surface determinant isdG [H]
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSF KKAHGRTKDTREQREDRKGIVGNEIARFEVVHVQNPVTIEK
Sequences:
>Translated_121_residues MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSF KKAHGRTKDTREQREDRKGIVGNEIARFEVVHVQNPVTIEK >Mature_121_residues MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSF KKAHGRTKDTREQREDRKGIVGNEIARFEVVHVQNPVTIEK
Specific function: Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subseque
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antibiotic biosynthesis monooxygenase family. Heme-degrading monooxygenase isdG subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007138 - InterPro: IPR011008 [H]
Pfam domain/function: PF03992 ABM [H]
EC number: =1.14.99.3 [H]
Molecular weight: Translated: 13846; Mature: 13846
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVV CEEECCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEE VTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVGNEIARFEVVHVQNPVTIE EECCCCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCEEEC K C >Mature Secondary Structure MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVV CEEECCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEE VTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVGNEIARFEVVHVQNPVTIE EECCCCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCEEEC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]