| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871833
Identifier: 116871833
GI number: 116871833
Start: 429424
End: 430011
Strand: Direct
Name: 116871833
Synonym: lwe0413
Alternate gene names: NA
Gene position: 429424-430011 (Clockwise)
Preceding gene: 116871832
Following gene: 116871834
Centisome position: 15.26
GC content: 34.52
Gene sequence:
>588_bases ATGATAAATCTAGAGTGGGAAGAATTAGATCGATTAGAAGTAGAAGAAAAGGTTCAAGAGGTATTAGATTACAGTTATAA TACCTGGATGTCTGATAAGAAGAATATTCGTTATTTTGTGCGAGCGTTTTATATAAGATGGGATATGTTGGTTGACATGT ATGAAGTGGAAGATGATGAAACGGAAGGCGATAAGTTAAAATATATGTATGATTTTGGCATTAGCGAGCTGGGAAATATT ACAGAGGTCGACTGGATAATAAGTTATTGCATGGAAATTAATCCAATCTATTTTGAAGAAAATGATAATTATTTGGAACT TGAGGAGAAAGGGCAGGAAATGCTTCGTAATGTAGCAATAAATAACTCAGATGACGTCTTTTTGACTTCTTTTGGTATAC CTGAAAAAGATTATTTGAAATGGAAAAGAGCGAACAAAGAGCAACTTATTCAGTATGGGGAAGATAATTTTAGCTATGAC TCGGAGTTTTCGAGATATTTTAAACATATTATAAATTGCAGGGCGGATGAAGAGGTGGAAAAAGAAAGCTTTCTGAAGAA GATTGTGCGCAGGTGGAGGCAACGTTGA
Upstream 100 bases:
>100_bases TGCTCATTGTATTTTTTATGTTTACTAATTTTTGTGTTTACATTAATAAAAGATTTTTTGTATATTCCATAACAATTACT CATAGAAACGAGAGGATCTT
Downstream 100 bases:
>100_bases GATTCCATTTGGAGGTATGAGTATATGCTAAAAAAAACGAAAAAAATTCTCAATGAAATTAAAACTATTATCCAGCAAAA ACCTTTTGATTATGAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MINLEWEELDRLEVEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDETEGDKLKYMYDFGISELGNI TEVDWIISYCMEINPIYFEENDNYLELEEKGQEMLRNVAINNSDDVFLTSFGIPEKDYLKWKRANKEQLIQYGEDNFSYD SEFSRYFKHIINCRADEEVEKESFLKKIVRRWRQR
Sequences:
>Translated_195_residues MINLEWEELDRLEVEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDETEGDKLKYMYDFGISELGNI TEVDWIISYCMEINPIYFEENDNYLELEEKGQEMLRNVAINNSDDVFLTSFGIPEKDYLKWKRANKEQLIQYGEDNFSYD SEFSRYFKHIINCRADEEVEKESFLKKIVRRWRQR >Mature_195_residues MINLEWEELDRLEVEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDETEGDKLKYMYDFGISELGNI TEVDWIISYCMEINPIYFEENDNYLELEEKGQEMLRNVAINNSDDVFLTSFGIPEKDYLKWKRANKEQLIQYGEDNFSYD SEFSRYFKHIINCRADEEVEKESFLKKIVRRWRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23986; Mature: 23986
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLEWEELDRLEVEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDE CCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TEGDKLKYMYDFGISELGNITEVDWIISYCMEINPIYFEENDNYLELEEKGQEMLRNVAI CCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHCC NNSDDVFLTSFGIPEKDYLKWKRANKEQLIQYGEDNFSYDSEFSRYFKHIINCRADEEVE CCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH KESFLKKIVRRWRQR HHHHHHHHHHHHHCC >Mature Secondary Structure MINLEWEELDRLEVEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDE CCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TEGDKLKYMYDFGISELGNITEVDWIISYCMEINPIYFEENDNYLELEEKGQEMLRNVAI CCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHCC NNSDDVFLTSFGIPEKDYLKWKRANKEQLIQYGEDNFSYDSEFSRYFKHIINCRADEEVE CCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH KESFLKKIVRRWRQR HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA