| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871832
Identifier: 116871832
GI number: 116871832
Start: 428259
End: 428699
Strand: Direct
Name: 116871832
Synonym: lwe0412
Alternate gene names: NA
Gene position: 428259-428699 (Clockwise)
Preceding gene: 116871831
Following gene: 116871833
Centisome position: 15.22
GC content: 28.12
Gene sequence:
>441_bases ATGAAAAAATTAAACTATTTTTCTGTAGGATTTGATTATGATGAAGAAAAGAATCCAATTATGTCATTTGACAGTCAAAG TCACTGTATTTCAGAAATGTATTCAGGTGCATTTAAACCAATGGTGACAAAAGAGACTTCTTGTATTGATATTAATTGTA TACCAACGGGAAAAAAAGTCGATAAATCTCATCACCTCTATGCCATTTATAGAGTTTATTTTGAAAATAAGTTGTTTGAT TTAAATAAGTTTAATGATGAAAATGACTCAGAAAAGAAAAAAATCATTTTAGAACTGCTTCACATAGGAGCTATAGAAGC GTGTCGTAATTTGGGCTTAGATAAGGCTAGATTTATTGAGGCATATGAAAAGGTAAAAGAATTAGACTATCAAAATAATT ACTACTATAAAAAATCAAAATCCAGCCCAAATAGAAAATAA
Upstream 100 bases:
>100_bases GCATCAAGAAAACACAATTTTTTAATACTAATGGATATTTGTTCGCTATATCTTTTGTTTTCTAGTACCTTGGCATAAAA TTTACTCTTGGAGATGAAAT
Downstream 100 bases:
>100_bases AAAGCACAAATTTATATTGAGCATGGCTTATACAAAGCTGACATATATATCATTATTTTTAACAAGGAACAGAAAATCAT AAGAAAAGAATTTATCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKKLNYFSVGFDYDEEKNPIMSFDSQSHCISEMYSGAFKPMVTKETSCIDINCIPTGKKVDKSHHLYAIYRVYFENKLFD LNKFNDENDSEKKKIILELLHIGAIEACRNLGLDKARFIEAYEKVKELDYQNNYYYKKSKSSPNRK
Sequences:
>Translated_146_residues MKKLNYFSVGFDYDEEKNPIMSFDSQSHCISEMYSGAFKPMVTKETSCIDINCIPTGKKVDKSHHLYAIYRVYFENKLFD LNKFNDENDSEKKKIILELLHIGAIEACRNLGLDKARFIEAYEKVKELDYQNNYYYKKSKSSPNRK >Mature_146_residues MKKLNYFSVGFDYDEEKNPIMSFDSQSHCISEMYSGAFKPMVTKETSCIDINCIPTGKKVDKSHHLYAIYRVYFENKLFD LNKFNDENDSEKKKIILELLHIGAIEACRNLGLDKARFIEAYEKVKELDYQNNYYYKKSKSSPNRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17197; Mature: 17197
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNYFSVGFDYDEEKNPIMSFDSQSHCISEMYSGAFKPMVTKETSCIDINCIPTGKKV CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCCC DKSHHLYAIYRVYFENKLFDLNKFNDENDSEKKKIILELLHIGAIEACRNLGLDKARFIE CCCCCCEEHHEEHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AYEKVKELDYQNNYYYKKSKSSPNRK HHHHHHHCCCCCCEEEECCCCCCCCC >Mature Secondary Structure MKKLNYFSVGFDYDEEKNPIMSFDSQSHCISEMYSGAFKPMVTKETSCIDINCIPTGKKV CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCCC DKSHHLYAIYRVYFENKLFDLNKFNDENDSEKKKIILELLHIGAIEACRNLGLDKARFIE CCCCCCEEHHEEHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AYEKVKELDYQNNYYYKKSKSSPNRK HHHHHHHCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA