Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871777

Identifier: 116871777

GI number: 116871777

Start: 374642

End: 375268

Strand: Direct

Name: 116871777

Synonym: lwe0357

Alternate gene names: NA

Gene position: 374642-375268 (Clockwise)

Preceding gene: 116871776

Following gene: 116871778

Centisome position: 13.31

GC content: 30.3

Gene sequence:

>627_bases
TTGAAAAAAATAAGCTGGGTGATTATTATACTGATTATCATAGTTGCATCAGTAGGCTATTATTTTATAAAAGAAAATGA
AAAAAAGACCCCTCAAACAATTTCCTATAAAACGGTAGAGGCTAAAAAAACAGATTTGCAAGTCCATGTTTCTGCGGAAG
GTCATGTAAAAAAAACAGCAAATGAATGGCCAGATTATAAAGATTTCGTAGTACAAGTGATGGTTGACGAGCTAGAAATC
AACCAAATAAAAGAAAAACAAACGACAGATGTGAATGTTCAAGCTGTAGATAATAAAATTTACAAAGGGACAGTCGCAAA
AATAAATGAAAAAGGTGTAATAAATGGCTCCGTGACATCCTATATCGTCACAATTAATTTAGAAAAAGAAAATAGTTTAA
AAGAAAATATGTCCGTTAACGCAGATATACTTGTTGCTTTAGAAAAAAACGCTTTAATCATCCCAATTGAAGCTGTTTAT
ACAGATAAAGCAGACAAAAAATATGTATTTATTGTTGATGAAAATAAGCAAAAAAAGAAAATATGGATTGAAACAGGGAA
ACATAATACGAAATCTATTCAAGTAGTAAAAGGTCTTAGAAAGGGACAACAAGTGATTATTCCTTAG

Upstream 100 bases:

>100_bases
CTATTTTCAAATCATGGAATTATGAGCAACTTAAAGATTGCTTTCAACACATTATGAATGCAATGATACTAATTGCTTTT
TAAAGAGAGGTTTTTAACTA

Downstream 100 bases:

>100_bases
ATGGAGGTTAGTGCAACATGATACAGCTTTTTAATATTTCAAAAACGTATCAAATGGGAGAAGATACGATAAAAGCATTA
GATAATTTATCTTTACAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Biotin/Lipoyl Attachment Domain-Containing Protein; RND Family Efflux Transporter MFP Subunit; Membrane Permease Cation Efflux Pumps

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTANEWPDYKDFVVQVMVDELEI
NQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTSYIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVY
TDKADKKYVFIVDENKQKKKIWIETGKHNTKSIQVVKGLRKGQQVIIP

Sequences:

>Translated_208_residues
MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTANEWPDYKDFVVQVMVDELEI
NQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTSYIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVY
TDKADKKYVFIVDENKQKKKIWIETGKHNTKSIQVVKGLRKGQQVIIP
>Mature_208_residues
MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTANEWPDYKDFVVQVMVDELEI
NQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTSYIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVY
TDKADKKYVFIVDENKQKKKIWIETGKHNTKSIQVVKGLRKGQQVIIP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23617; Mature: 23617

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTA
CCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCEECCH
NEWPDYKDFVVQVMVDELEINQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTS
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECEEEEECCCCEECCCCEE
YIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVYTDKADKKYVFIVDENKQKKK
EEEEEEECCCCCHHHCCCCCCEEEEEEECCEEEEEEEEEECCCCCCEEEEEECCCCCCEE
IWIETGKHNTKSIQVVKGLRKGQQVIIP
EEEECCCCCCCHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MKKISWVIIILIIIVASVGYYFIKENEKKTPQTISYKTVEAKKTDLQVHVSAEGHVKKTA
CCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCEECCH
NEWPDYKDFVVQVMVDELEINQIKEKQTTDVNVQAVDNKIYKGTVAKINEKGVINGSVTS
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECEEEEECCCCEECCCCEE
YIVTINLEKENSLKENMSVNADILVALEKNALIIPIEAVYTDKADKKYVFIVDENKQKKK
EEEEEEECCCCCHHHCCCCCCEEEEEEECCEEEEEEEEEECCCCCCEEEEEECCCCCCEE
IWIETGKHNTKSIQVVKGLRKGQQVIIP
EEEECCCCCCCHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA