| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is mtlR [H]
Identifier: 116871765
GI number: 116871765
Start: 365296
End: 367359
Strand: Direct
Name: mtlR [H]
Synonym: lwe0345
Alternate gene names: 116871765
Gene position: 365296-367359 (Clockwise)
Preceding gene: 116871763
Following gene: 116871766
Centisome position: 12.98
GC content: 34.98
Gene sequence:
>2064_bases ATGTATATGGATGAGAGAAGTTTGACCTTACTGCAGGAGGTCTTGAAAAATCCAAGTATATCGAATCAGCGTCTGGGAGA AAAATTTCACTTAACCAGGCGGCAAGTAAGTTATAGCTTTAAGAAAATCAATGAATGGTTACTCGATAATAATTATTCGA GCATTCAAAAAAATAATCAAGGTCATTTTTTAGTGGATCCGAATGTGACTTTATTATTATCAAAAAAAGATGAAGCAGAT GCAGAAAAGGAGTATTTACCAACTGAAAAAGAGCGTGTTCATTTATTACTTCTTATGATTTTAACTAGCGAAACCGCACT TTCAACCTCTCATTTCACTTCGGCGCTCCAGTTTAGTAAAGCGACCATTATGCGAGATATCAAAATGCTTCAACAACTAC TTAAAAAAGAAGACTTAGAAATCTTGTATACAAGGCAAAATGGATACCAAGTAATTGGAGATGAATGGCAAATTCGTCGC AAAATGATGGAACTAATCGCGGAAGTCCATCAAATGTTTCACGGGGACAATTATTTAAGAAAATTCACTTCTATTACCAA AGAAACAATTCAACAAATTTATGAAAAAATTGAACGAGTTGAAAAGAAATTAGAGTTGAAATTCACCGATGAGAAGATTT TTATTTTACCTTATGTATTCGCTAGTATGCTAAGGCGCATAGAAATGGGTAAAGGGATTAGTTCTTATTTTCAGATTAAT TATAATGAGTTATCTGACACCAATGAATATCAAGCAGTAGAAATTTTGTTGGAAGGTGTTGCTGATTTAGCGGAGGAAGA ACGACTTTACATGGCTTTACAATTATTAACAAGTAACGTTTCTTACCAATCTGTTTTGACAGAAAATCAGTTGCCGCGAT TGAATCGAGCACTGGATGCTATGTTGACGATTTTGGAGGAAAAGGCATTGATTCAATTTAAAAATCGGGTGGAATTGGTT GAAAAACTATCCCTTCATATGAAGCCCGCTTATTATCGAATCAAATACCATTTAACGATGAGTTTTATGATTCCAGATGT TATTCATGAAGAATTTAATGCGCTTCATTTTTTAGTAAAGGAGTCTATCTGGCCACTTGAAAACTTTATTGGGGAAACAA TTCCAGATGAAGAAATTTATTTTATCACGTTATTTATTGGTGGTCATTTAATTAAAACTGGTGAAATAACGCAACATAAA AAGCCCAGTGCCATTGTTATTTGCCCAAATGGTGTTAGTATTTCTAAATTAATTGAAAGCCAATTAGCTAAATTGTTTCC TGAATTTCATTTTTGGCAGACGATGTCCATTCGAGAGTTTGAGAAAACAGCGCCAAATGTGGATGTAGTGTTTTCGGTGA CCCCAGTTGAAACGACTTGTAAACTTTATATTATGAGCCATTATATGAGCTTTGAAGAACAGCAGCGATTACGTCAAAGA GTGATGAATGAAGTATTTCATGTGGTTACCGAGTCACTTGATTTAGAGCAACTATTGGCGCGGATTGAGCAACACGTCGA AGTAACAGATCGTTCCAACTTAAAAAAAGAACTATATGGCTTTTTTCAAGAAAAAGATCGTAACAAAGTAACTGATTTTC AAAAAGAAGAGATTGAATATTGTTTGGAAGATTTAATGAGTTCAAATATGACTCGTGTTGTAAAGAGCGTTCCAAATTGG CATACGGCAATCGAACTGACAGCTGCACCGCTTTTAGAAGCTGGTTTCATTGATCAAACTTATGTAAATGCAATGAAGTC TCTTTACCCTGAAATAGCCCCATATATCGTTCTAAAAGGCAATATTTTACTGCCACATGCAAGACCGGAAGACGGTGTAA ATAAATTTGGCCTTTCCATTTTGAAAGTGGAAGATGGACTAATCTTTAATGGGAAAAAGATTCATCTGCTCGTTGTGCTG GCTCCGGTGGATAAAAAGAAGCATTTGACGGCGATGTTTCAACTACTTACAATTGCTTCCAATCAACAAGTGATAGACAA ATTAAAAAACGCAACTAGCGGGACGGCGATTTGTCAGATATTTAAAGAGAATTTAACAAAATAA
Upstream 100 bases:
>100_bases TTGTGTTCAATTGGGTGACTACTTTTGAATATGAAAACGCATACAAAATGTGAAATATCTATGTTATATTGAATTTAGAC CTGAGAGGGAGGGAGATAAG
Downstream 100 bases:
>100_bases AAAATAGAAAGGAAGTGATGAGATGAAAATGGTGCATGAGGAGTTAGTATTTCCGGGGCTTACCGCTTCTAATTATGAAG AGGTTATTAAGTTAGTTGGA
Product: PRD/PTS system IIA 2 domain-containing regulatory protein
Products: NA
Alternate protein names: Mannitol operon transcriptional activator; Mtl operon transcriptional activator; Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 687; Mature: 687
Protein sequence:
>687_residues MYMDERSLTLLQEVLKNPSISNQRLGEKFHLTRRQVSYSFKKINEWLLDNNYSSIQKNNQGHFLVDPNVTLLLSKKDEAD AEKEYLPTEKERVHLLLLMILTSETALSTSHFTSALQFSKATIMRDIKMLQQLLKKEDLEILYTRQNGYQVIGDEWQIRR KMMELIAEVHQMFHGDNYLRKFTSITKETIQQIYEKIERVEKKLELKFTDEKIFILPYVFASMLRRIEMGKGISSYFQIN YNELSDTNEYQAVEILLEGVADLAEEERLYMALQLLTSNVSYQSVLTENQLPRLNRALDAMLTILEEKALIQFKNRVELV EKLSLHMKPAYYRIKYHLTMSFMIPDVIHEEFNALHFLVKESIWPLENFIGETIPDEEIYFITLFIGGHLIKTGEITQHK KPSAIVICPNGVSISKLIESQLAKLFPEFHFWQTMSIREFEKTAPNVDVVFSVTPVETTCKLYIMSHYMSFEEQQRLRQR VMNEVFHVVTESLDLEQLLARIEQHVEVTDRSNLKKELYGFFQEKDRNKVTDFQKEEIEYCLEDLMSSNMTRVVKSVPNW HTAIELTAAPLLEAGFIDQTYVNAMKSLYPEIAPYIVLKGNILLPHARPEDGVNKFGLSILKVEDGLIFNGKKIHLLVVL APVDKKKHLTAMFQLLTIASNQQVIDKLKNATSGTAICQIFKENLTK
Sequences:
>Translated_687_residues MYMDERSLTLLQEVLKNPSISNQRLGEKFHLTRRQVSYSFKKINEWLLDNNYSSIQKNNQGHFLVDPNVTLLLSKKDEAD AEKEYLPTEKERVHLLLLMILTSETALSTSHFTSALQFSKATIMRDIKMLQQLLKKEDLEILYTRQNGYQVIGDEWQIRR KMMELIAEVHQMFHGDNYLRKFTSITKETIQQIYEKIERVEKKLELKFTDEKIFILPYVFASMLRRIEMGKGISSYFQIN YNELSDTNEYQAVEILLEGVADLAEEERLYMALQLLTSNVSYQSVLTENQLPRLNRALDAMLTILEEKALIQFKNRVELV EKLSLHMKPAYYRIKYHLTMSFMIPDVIHEEFNALHFLVKESIWPLENFIGETIPDEEIYFITLFIGGHLIKTGEITQHK KPSAIVICPNGVSISKLIESQLAKLFPEFHFWQTMSIREFEKTAPNVDVVFSVTPVETTCKLYIMSHYMSFEEQQRLRQR VMNEVFHVVTESLDLEQLLARIEQHVEVTDRSNLKKELYGFFQEKDRNKVTDFQKEEIEYCLEDLMSSNMTRVVKSVPNW HTAIELTAAPLLEAGFIDQTYVNAMKSLYPEIAPYIVLKGNILLPHARPEDGVNKFGLSILKVEDGLIFNGKKIHLLVVL APVDKKKHLTAMFQLLTIASNQQVIDKLKNATSGTAICQIFKENLTK >Mature_687_residues MYMDERSLTLLQEVLKNPSISNQRLGEKFHLTRRQVSYSFKKINEWLLDNNYSSIQKNNQGHFLVDPNVTLLLSKKDEAD AEKEYLPTEKERVHLLLLMILTSETALSTSHFTSALQFSKATIMRDIKMLQQLLKKEDLEILYTRQNGYQVIGDEWQIRR KMMELIAEVHQMFHGDNYLRKFTSITKETIQQIYEKIERVEKKLELKFTDEKIFILPYVFASMLRRIEMGKGISSYFQIN YNELSDTNEYQAVEILLEGVADLAEEERLYMALQLLTSNVSYQSVLTENQLPRLNRALDAMLTILEEKALIQFKNRVELV EKLSLHMKPAYYRIKYHLTMSFMIPDVIHEEFNALHFLVKESIWPLENFIGETIPDEEIYFITLFIGGHLIKTGEITQHK KPSAIVICPNGVSISKLIESQLAKLFPEFHFWQTMSIREFEKTAPNVDVVFSVTPVETTCKLYIMSHYMSFEEQQRLRQR VMNEVFHVVTESLDLEQLLARIEQHVEVTDRSNLKKELYGFFQEKDRNKVTDFQKEEIEYCLEDLMSSNMTRVVKSVPNW HTAIELTAAPLLEAGFIDQTYVNAMKSLYPEIAPYIVLKGNILLPHARPEDGVNKFGLSILKVEDGLIFNGKKIHLLVVL APVDKKKHLTAMFQLLTIASNQQVIDKLKNATSGTAICQIFKENLTK
Specific function: Positively regulates the expression of the mtlAFD operon involved in the uptake and catabolism of mannitol [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1789302, Length=113, Percent_Identity=32.7433628318584, Blast_Score=73, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 79981; Mature: 79981
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMDERSLTLLQEVLKNPSISNQRLGEKFHLTRRQVSYSFKKINEWLLDNNYSSIQKNNQ CCCCCHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC GHFLVDPNVTLLLSKKDEADAEKEYLPTEKERVHLLLLMILTSETALSTSHFTSALQFSK CCEEECCCEEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ATIMRDIKMLQQLLKKEDLEILYTRQNGYQVIGDEWQIRRKMMELIAEVHQMFHGDNYLR HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHCCCHHHH KFTSITKETIQQIYEKIERVEKKLELKFTDEKIFILPYVFASMLRRIEMGKGISSYFQIN HHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEEEHHHHHHHHHHHHHHCCCCCHHEEEE YNELSDTNEYQAVEILLEGVADLAEEERLYMALQLLTSNVSYQSVLTENQLPRLNRALDA CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHH MLTILEEKALIQFKNRVELVEKLSLHMKPAYYRIKYHLTMSFMIPDVIHEEFNALHFLVK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH ESIWPLENFIGETIPDEEIYFITLFIGGHLIKTGEITQHKKPSAIVICPNGVSISKLIES HHCCCHHHHHCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEECCCCCCHHHHHHH QLAKLFPEFHFWQTMSIREFEKTAPNVDVVFSVTPVETTCKLYIMSHYMSFEEQQRLRQR HHHHHCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHH VMNEVFHVVTESLDLEQLLARIEQHVEVTDRSNLKKELYGFFQEKDRNKVTDFQKEEIEY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH CLEDLMSSNMTRVVKSVPNWHTAIELTAAPLLEAGFIDQTYVNAMKSLYPEIAPYIVLKG HHHHHHHCCHHHHHHHCCCCHHEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC NILLPHARPEDGVNKFGLSILKVEDGLIFNGKKIHLLVVLAPVDKKKHLTAMFQLLTIAS CEEECCCCCCCCHHHHCCEEEEEECCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCC NQQVIDKLKNATSGTAICQIFKENLTK CHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MYMDERSLTLLQEVLKNPSISNQRLGEKFHLTRRQVSYSFKKINEWLLDNNYSSIQKNNQ CCCCCHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC GHFLVDPNVTLLLSKKDEADAEKEYLPTEKERVHLLLLMILTSETALSTSHFTSALQFSK CCEEECCCEEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ATIMRDIKMLQQLLKKEDLEILYTRQNGYQVIGDEWQIRRKMMELIAEVHQMFHGDNYLR HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHCCCHHHH KFTSITKETIQQIYEKIERVEKKLELKFTDEKIFILPYVFASMLRRIEMGKGISSYFQIN HHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEEEHHHHHHHHHHHHHHCCCCCHHEEEE YNELSDTNEYQAVEILLEGVADLAEEERLYMALQLLTSNVSYQSVLTENQLPRLNRALDA CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHH MLTILEEKALIQFKNRVELVEKLSLHMKPAYYRIKYHLTMSFMIPDVIHEEFNALHFLVK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH ESIWPLENFIGETIPDEEIYFITLFIGGHLIKTGEITQHKKPSAIVICPNGVSISKLIES HHCCCHHHHHCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEECCCCCCHHHHHHH QLAKLFPEFHFWQTMSIREFEKTAPNVDVVFSVTPVETTCKLYIMSHYMSFEEQQRLRQR HHHHHCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHH VMNEVFHVVTESLDLEQLLARIEQHVEVTDRSNLKKELYGFFQEKDRNKVTDFQKEEIEY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH CLEDLMSSNMTRVVKSVPNWHTAIELTAAPLLEAGFIDQTYVNAMKSLYPEIAPYIVLKG HHHHHHHCCHHHHHHHCCCCHHEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC NILLPHARPEDGVNKFGLSILKVEDGLIFNGKKIHLLVVLAPVDKKKHLTAMFQLLTIAS CEEECCCCCCCCHHHHCCEEEEEECCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCC NQQVIDKLKNATSGTAICQIFKENLTK CHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]