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The map label for this gene is yycH [H]

Identifier: 116871683

GI number: 116871683

Start: 285088

End: 286410

Strand: Direct

Name: yycH [H]

Synonym: lwe0263

Alternate gene names: 116871683

Gene position: 285088-286410 (Clockwise)

Preceding gene: 116871682

Following gene: 116871684

Centisome position: 10.13

GC content: 33.33

Gene sequence:

>1323_bases
ATGATGAAAAAAACAGGATTTCGTTCATTTTTATTAACAATTTTAGTTATACTCAGCATCGTCTTAAGCTACTTTATTTG
GAAAGGACAACCCGATTACGAAGCCATTAATGTGAAGGAAGTAGAAAAAACCACCATTGATAAAACGATGACCACTTCTC
AGGTTTTCAAGCCGTATAAACTAGTTGTCAATTCAAACGGAAATAATTACCAAAGTTTAAATGAAAGTTTATTAAATGAA
ATAATGGCTCAAGGCAAAGCATTCAGTTTCTCAGAAGTAGTCCTAGCTAATAAAAAAAATAGTGAGGAATACGAGAAAGT
AGTTCATAAAAACGGTACTATCGAAATCGTTTTTCCAAATAATATTCCATTTTCGATTTTTTCACAAATTTTTCAAGTAG
AAGGAGACGGAATAGAATCAGCTTTCTTTAACCGAATTGTCTTGGATATTAACAATACCGATACTGGGCTGCATTCAGTA
TATTTTGCGAATGATGATCAGGAAAATATTTACCAAAGTTCGTTGCAAAATAAAGATATAGACAAAATTGAAAAAATCAT
TAAAAAGAATCAAAATAAATTAACACAGAATAATAAATTAATCTTAAATAAACGCAATATGTTCTTAAGTTCAGAGGAAA
CAAAACTGAACCGCAAAAAATATATTATCGACTCTCTAGAAATAAACTTATTTACATCGGCTTTATTCCAAGATTCTGGT
ACTGTTAAAAGCGAAGGAAATACGTATACAGATGGTTCTAGTGTTATTGAAATGGATACAGATAATAAAGTGTTAGAATA
TGTGAATCCATCTCAAGAACGAACGAATCCAGAAGATCTTAGTAGCGCAAAAAGAGCTGGACTTATTCAAGATAGCTTCA
ATTTTATTAATGATCATGCTGGCTGGACCGGAGACGGTTCGTACTATTTCACAGGTTATACTGGTGAAAGTGCGACAACC
AATTTCAGTTTGTTTATTGATAATTTACAAGTCTACAATGAAAATGGAATGGCAGATATTTCTGTTACAGAAGGTCTTGA
AGCTGTATACAAATATATGCGCCCATTTTTCCGCCTAGATACAGATGTGCCAGGTGAGAAAAAAGAAGTCACATTGCCAT
CTTCCTATTCGGTTTATAAACAACTTTCGGCTAATCCAAATGTGAAAGCAGAAGAAATAGAAGACATAGTTCCTGGCTAC
CATATGACGAGAAGTGAGTCATCAGGAATGAACCGAATCGTGACCCTAGAACCAACGTGGCTATATAAATATCACGATAA
ATGGTTTATCTTCCAACCAGAAACGAAAAAGGAGGGTCAATAA

Upstream 100 bases:

>100_bases
AAGCGCATGGCGGTCGAATTTGGGCAGAACGTAACAAGTCCAAAGGTACAGTTATTAAATTCACCCTGCCATATAGTGAC
TTACCGGAGGATGATTGGGA

Downstream 100 bases:

>100_bases
AAATGGATTGGCGTAAAACACAACTGATTTTTATTTTAACACTCCTCATATTAAATATATTTTTAACTGTTATTTTCTTT
ACGAAACAACTATCAGATGA

Product: putative secreted YycH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MMKKTGFRSFLLTILVILSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYKLVVNSNGNNYQSLNESLLNE
IMAQGKAFSFSEVVLANKKNSEEYEKVVHKNGTIEIVFPNNIPFSIFSQIFQVEGDGIESAFFNRIVLDINNTDTGLHSV
YFANDDQENIYQSSLQNKDIDKIEKIIKKNQNKLTQNNKLILNKRNMFLSSEETKLNRKKYIIDSLEINLFTSALFQDSG
TVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSAKRAGLIQDSFNFINDHAGWTGDGSYYFTGYTGESATT
NFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYKQLSANPNVKAEEIEDIVPGY
HMTRSESSGMNRIVTLEPTWLYKYHDKWFIFQPETKKEGQ

Sequences:

>Translated_440_residues
MMKKTGFRSFLLTILVILSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYKLVVNSNGNNYQSLNESLLNE
IMAQGKAFSFSEVVLANKKNSEEYEKVVHKNGTIEIVFPNNIPFSIFSQIFQVEGDGIESAFFNRIVLDINNTDTGLHSV
YFANDDQENIYQSSLQNKDIDKIEKIIKKNQNKLTQNNKLILNKRNMFLSSEETKLNRKKYIIDSLEINLFTSALFQDSG
TVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSAKRAGLIQDSFNFINDHAGWTGDGSYYFTGYTGESATT
NFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYKQLSANPNVKAEEIEDIVPGY
HMTRSESSGMNRIVTLEPTWLYKYHDKWFIFQPETKKEGQ
>Mature_440_residues
MMKKTGFRSFLLTILVILSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYKLVVNSNGNNYQSLNESLLNE
IMAQGKAFSFSEVVLANKKNSEEYEKVVHKNGTIEIVFPNNIPFSIFSQIFQVEGDGIESAFFNRIVLDINNTDTGLHSV
YFANDDQENIYQSSLQNKDIDKIEKIIKKNQNKLTQNNKLILNKRNMFLSSEETKLNRKKYIIDSLEINLFTSALFQDSG
TVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSAKRAGLIQDSFNFINDHAGWTGDGSYYFTGYTGESATT
NFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYKQLSANPNVKAEEIEDIVPGY
HMTRSESSGMNRIVTLEPTWLYKYHDKWFIFQPETKKEGQ

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 50282; Mature: 50282

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKTGFRSFLLTILVILSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEE
LVVNSNGNNYQSLNESLLNEIMAQGKAFSFSEVVLANKKNSEEYEKVVHKNGTIEIVFPN
EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCHHHHHHHHHCCCCEEEEECC
NIPFSIFSQIFQVEGDGIESAFFNRIVLDINNTDTGLHSVYFANDDQENIYQSSLQNKDI
CCCHHHHHHHHHCCCCCHHHHHHCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCH
DKIEKIIKKNQNKLTQNNKLILNKRNMFLSSEETKLNRKKYIIDSLEINLFTSALFQDSG
HHHHHHHHCCCHHHCCCCEEEEEECCCEECCCHHHHCCHHEEEEHEEHHHHHHHHHCCCC
TVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSAKRAGLIQDSFNFINDHA
CEECCCCEECCCCEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
GWTGDGSYYFTGYTGESATTNFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFRLD
CCCCCCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCC
TDVPGEKKEVTLPSSYSVYKQLSANPNVKAEEIEDIVPGYHMTRSESSGMNRIVTLEPTW
CCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHCCCCEECCCCCCCCCEEEEECCEE
LYKYHDKWFIFQPETKKEGQ
EEEECCEEEEECCCCCCCCC
>Mature Secondary Structure
MMKKTGFRSFLLTILVILSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEE
LVVNSNGNNYQSLNESLLNEIMAQGKAFSFSEVVLANKKNSEEYEKVVHKNGTIEIVFPN
EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCHHHHHHHHHCCCCEEEEECC
NIPFSIFSQIFQVEGDGIESAFFNRIVLDINNTDTGLHSVYFANDDQENIYQSSLQNKDI
CCCHHHHHHHHHCCCCCHHHHHHCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCH
DKIEKIIKKNQNKLTQNNKLILNKRNMFLSSEETKLNRKKYIIDSLEINLFTSALFQDSG
HHHHHHHHCCCHHHCCCCEEEEEECCCEECCCHHHHCCHHEEEEHEEHHHHHHHHHCCCC
TVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSAKRAGLIQDSFNFINDHA
CEECCCCEECCCCEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
GWTGDGSYYFTGYTGESATTNFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFRLD
CCCCCCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCC
TDVPGEKKEVTLPSSYSVYKQLSANPNVKAEEIEDIVPGYHMTRSESSGMNRIVTLEPTW
CCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHCCCCEECCCCCCCCCEEEEECCEE
LYKYHDKWFIFQPETKKEGQ
EEEECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]