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The map label for this gene is uup [C]

Identifier: 116871652

GI number: 116871652

Start: 247049

End: 248728

Strand: Direct

Name: uup [C]

Synonym: lwe0232

Alternate gene names: 116871652

Gene position: 247049-248728 (Clockwise)

Preceding gene: 116871651

Following gene: 116871653

Centisome position: 8.78

GC content: 26.96

Gene sequence:

>1680_bases
TTGGATATAACTAAAAACGGAATATACATAATTGTTGGCGTAAACGGGGCTGGAAAAACGACATTAGCAAAAAAAATACT
AGCATCTAATAGAAATATTTGTTGTATGATGAAACAAGATGATAATCAAATATTAGAGCATGAAACTGTGTTGACGAATA
TTACTATGAATGAGATTTCGGATGAACGAGCTATTAATTTCTTGAAAGAAAAGCAATTAGAATATTTATTAACCAAAAAA
AGTAAATTTTTAAGCGGTGGTGAAAAAAGGCTAATTAATCTTTTGAGAGTAGTTTTGTCAAATCAGGAAGTATTGATATT
AGATGAGCCATCTAATGATTTAGATATGGATGTTTTTGATAAAGCAAAAGAAATAATCTATCAAGCAGCTAAGAACAAAA
TAGTTCTCCTAATCACACATGATGATCGCTTTATTAAATATGACAAAAAATTAGAAGTTACAAAAAGTAAAATATATGAT
ACAAATGAAAAAAAATATGTTGATGATATTCACTTTAAACAAGAAGGGGTAAATGAACGAACTATTAAAATAAAACCTAG
AAAAACGTATTTCTTGTATATCTTTTATCTGTTATGCATGACGATTTTTTTTATTTTTTTAGTTAGCTTATTAGCAGCAA
ATAATGAAGAAACAAAGCCAACAAGTAAAAAAGGGACATATCAGCTCGCAACTCTTTATAGTGCTAATGCTTCTTCCTAT
GACAATATTGAAGCCATTAATACAATGCTTATACAATCAGCAACGAAATGGAATAAAGCAAAATATTTTGATGTAGAAAA
ACGTATTAATGAAGATGAGTATTATGAAGAAGCGATTAATTTGAAAAAAGATACTTACCAAGACTTAATATTTTTGGAGT
TTTATAATCCGGAAACAAAAGAATTTATGAATATTCAAGCATTAACGATGGAATATTTACAACAAAACTTAAAACTTAAA
GAAAATGTAGAACTTATTAGTGACGATGAAAATTACTATAAAAATAGCGAGAATCCGTCTTTTTATTTAGCAGACAATAT
AGTTTTAACACAAGAGAAAATAACCCAAATAGAGTCTTGGGGTTATAAGATTCGTACTAGTGATACTTTGGAACCAAATC
AGATAGAAGTAGATTTTAATCCTGCTTTATATTCGAAAATTTTAGCAAAAATCAATCAAAGTGATGTTTTGATTACAGAA
GCTCGTGTTAAATTAAAAGAAAAAGCTTCATTTTATGACTTTGTAGCAGATAACAAATTATACGCTAAAAAAATGTTTAT
TAAAGGATATGAGCCTGAGTTATTAAATGCAGAGATTAATCAATATAGTAATACAATGAATTTAATAAAAAAAGTATTAC
TTATTATTAGTTTGCTATTATTATTGCTCCTAATTTTACTATTCATGTATGAGGCTAATTACAAGAATAGTTATAGTACT
TTGGCTTATTACGGTTACAATAAGAAAGAGTTACTTGAACATAGAAAAAAAGCATACCTAACAACAAAATTCAAAATTTT
TTCAATCATTACTACGTTTATTTATATGATAATAATGTGGATTTTTGTTCATTCGTTAATTAACATAACAATTATAGGCG
TGACAACTTTATTCTACGCACTTGTGTATATCATTACCCCTTCAACCATTAAATACAACATCAGAAAGGCAATTATATGA

Upstream 100 bases:

>100_bases
AATAATAAAAATGTGAAATCTCAATTAATTGTAGATTTATTTGTAATGTAGTTACATCATAGGCTCTTTATTCATCTAGA
AAATAAAAGGATAAATTAAT

Downstream 100 bases:

>100_bases
CTAAAATAAATAAATTTAGTATTTTTTCTATCAAAGAACCAGGAATATATACTATTGGCGGAGTTAACGGAAGTGGAAAA
ACAACTTTTATTGAAAATGA

Product: ABC transporter, ATP-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MDITKNGIYIIVGVNGAGKTTLAKKILASNRNICCMMKQDDNQILEHETVLTNITMNEISDERAINFLKEKQLEYLLTKK
SKFLSGGEKRLINLLRVVLSNQEVLILDEPSNDLDMDVFDKAKEIIYQAAKNKIVLLITHDDRFIKYDKKLEVTKSKIYD
TNEKKYVDDIHFKQEGVNERTIKIKPRKTYFLYIFYLLCMTIFFIFLVSLLAANNEETKPTSKKGTYQLATLYSANASSY
DNIEAINTMLIQSATKWNKAKYFDVEKRINEDEYYEEAINLKKDTYQDLIFLEFYNPETKEFMNIQALTMEYLQQNLKLK
ENVELISDDENYYKNSENPSFYLADNIVLTQEKITQIESWGYKIRTSDTLEPNQIEVDFNPALYSKILAKINQSDVLITE
ARVKLKEKASFYDFVADNKLYAKKMFIKGYEPELLNAEINQYSNTMNLIKKVLLIISLLLLLLLILLFMYEANYKNSYST
LAYYGYNKKELLEHRKKAYLTTKFKIFSIITTFIYMIIMWIFVHSLINITIIGVTTLFYALVYIITPSTIKYNIRKAII

Sequences:

>Translated_559_residues
MDITKNGIYIIVGVNGAGKTTLAKKILASNRNICCMMKQDDNQILEHETVLTNITMNEISDERAINFLKEKQLEYLLTKK
SKFLSGGEKRLINLLRVVLSNQEVLILDEPSNDLDMDVFDKAKEIIYQAAKNKIVLLITHDDRFIKYDKKLEVTKSKIYD
TNEKKYVDDIHFKQEGVNERTIKIKPRKTYFLYIFYLLCMTIFFIFLVSLLAANNEETKPTSKKGTYQLATLYSANASSY
DNIEAINTMLIQSATKWNKAKYFDVEKRINEDEYYEEAINLKKDTYQDLIFLEFYNPETKEFMNIQALTMEYLQQNLKLK
ENVELISDDENYYKNSENPSFYLADNIVLTQEKITQIESWGYKIRTSDTLEPNQIEVDFNPALYSKILAKINQSDVLITE
ARVKLKEKASFYDFVADNKLYAKKMFIKGYEPELLNAEINQYSNTMNLIKKVLLIISLLLLLLLILLFMYEANYKNSYST
LAYYGYNKKELLEHRKKAYLTTKFKIFSIITTFIYMIIMWIFVHSLINITIIGVTTLFYALVYIITPSTIKYNIRKAII
>Mature_559_residues
MDITKNGIYIIVGVNGAGKTTLAKKILASNRNICCMMKQDDNQILEHETVLTNITMNEISDERAINFLKEKQLEYLLTKK
SKFLSGGEKRLINLLRVVLSNQEVLILDEPSNDLDMDVFDKAKEIIYQAAKNKIVLLITHDDRFIKYDKKLEVTKSKIYD
TNEKKYVDDIHFKQEGVNERTIKIKPRKTYFLYIFYLLCMTIFFIFLVSLLAANNEETKPTSKKGTYQLATLYSANASSY
DNIEAINTMLIQSATKWNKAKYFDVEKRINEDEYYEEAINLKKDTYQDLIFLEFYNPETKEFMNIQALTMEYLQQNLKLK
ENVELISDDENYYKNSENPSFYLADNIVLTQEKITQIESWGYKIRTSDTLEPNQIEVDFNPALYSKILAKINQSDVLITE
ARVKLKEKASFYDFVADNKLYAKKMFIKGYEPELLNAEINQYSNTMNLIKKVLLIISLLLLLLLILLFMYEANYKNSYST
LAYYGYNKKELLEHRKKAYLTTKFKIFSIITTFIYMIIMWIFVHSLINITIIGVTTLFYALVYIITPSTIKYNIRKAII

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 65448; Mature: 65448

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITKNGIYIIVGVNGAGKTTLAKKILASNRNICCMMKQDDNQILEHETVLTNITMNEIS
CCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHEEEEHHHCC
DERAINFLKEKQLEYLLTKKSKFLSGGEKRLINLLRVVLSNQEVLILDEPSNDLDMDVFD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
KAKEIIYQAAKNKIVLLITHDDRFIKYDKKLEVTKSKIYDTNEKKYVDDIHFKQEGVNER
HHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
TIKIKPRKTYFLYIFYLLCMTIFFIFLVSLLAANNEETKPTSKKGTYQLATLYSANASSY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCC
DNIEAINTMLIQSATKWNKAKYFDVEKRINEDEYYEEAINLKKDTYQDLIFLEFYNPETK
CCHHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHH
EFMNIQALTMEYLQQNLKLKENVELISDDENYYKNSENPSFYLADNIVLTQEKITQIESW
HHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCEEEECCEEEEHHHHHHHHHC
GYKIRTSDTLEPNQIEVDFNPALYSKILAKINQSDVLITEARVKLKEKASFYDFVADNKL
CEEEEECCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEHHHHHHHHHCHHHHHHCCCCH
YAKKMFIKGYEPELLNAEINQYSNTMNLIKKVLLIISLLLLLLLILLFMYEANYKNSYST
HHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
LAYYGYNKKELLEHRKKAYLTTKFKIFSIITTFIYMIIMWIFVHSLINITIIGVTTLFYA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVYIITPSTIKYNIRKAII
HHHHHCCCCEEECHHHHCC
>Mature Secondary Structure
MDITKNGIYIIVGVNGAGKTTLAKKILASNRNICCMMKQDDNQILEHETVLTNITMNEIS
CCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHEEEEHHHCC
DERAINFLKEKQLEYLLTKKSKFLSGGEKRLINLLRVVLSNQEVLILDEPSNDLDMDVFD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
KAKEIIYQAAKNKIVLLITHDDRFIKYDKKLEVTKSKIYDTNEKKYVDDIHFKQEGVNER
HHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
TIKIKPRKTYFLYIFYLLCMTIFFIFLVSLLAANNEETKPTSKKGTYQLATLYSANASSY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCC
DNIEAINTMLIQSATKWNKAKYFDVEKRINEDEYYEEAINLKKDTYQDLIFLEFYNPETK
CCHHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHH
EFMNIQALTMEYLQQNLKLKENVELISDDENYYKNSENPSFYLADNIVLTQEKITQIESW
HHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCEEEECCEEEEHHHHHHHHHC
GYKIRTSDTLEPNQIEVDFNPALYSKILAKINQSDVLITEARVKLKEKASFYDFVADNKL
CEEEEECCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEHHHHHHHHHCHHHHHHCCCCH
YAKKMFIKGYEPELLNAEINQYSNTMNLIKKVLLIISLLLLLLLILLFMYEANYKNSYST
HHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
LAYYGYNKKELLEHRKKAYLTTKFKIFSIITTFIYMIIMWIFVHSLINITIIGVTTLFYA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVYIITPSTIKYNIRKAII
HHHHHCCCCEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12552129 [H]