| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871638
Identifier: 116871638
GI number: 116871638
Start: 225733
End: 226215
Strand: Direct
Name: 116871638
Synonym: lwe0218
Alternate gene names: NA
Gene position: 225733-226215 (Clockwise)
Preceding gene: 116871637
Following gene: 116871639
Centisome position: 8.02
GC content: 35.61
Gene sequence:
>483_bases ATGAAAAAATTATTAAGTTTAGTAGGGATTTTATTAATGGCACTCTTAGTAACGGCTTGTGGAAATGATCAAGCTGCGAG TGATGAAAAAATGGAAAAAGATACGTATGTGGCTGATTTACAAGGTGCCAAATTAGAAGCTACTTTTTCACATGTAGGTG ATAATGTAAGAAAAGTAGACCAAAAAATGGTGTACCCACTTGATTATCTTGGCTTAGAAGAAGGCGTAAAAGTAGACGAC GCGACGAAAAAACAACTAGAAGAACAAGTAACTTCGCAGTATAAAGGTTATAAAGATGGTAAAGGGACATCGCTTGAAAC GAAATTTACGGATGATGGCATGGAACTCAATATGTCTGTTGATTTATACAAAGCAGATAAAGATGCGGTTGGTTCTTTAC TAGTCGGAACAACCGATCCAAAAAATGTGAGCTATAAAGACACGGTAGAACAATTTGAAGCACAAGGTTTTACTAAAAAA TAG
Upstream 100 bases:
>100_bases GCAGTGCATGTGAATCCTATATCAAAATGAAAAAGGATTCAACGAGTTTAATGAATAAATATCAACTAAAAGATTAACAA AAAGGGAGTTTACAAAAAAC
Downstream 100 bases:
>100_bases TTTTAAAAATAGGAAATAGAATTTCTTTGGCTAGAGATTCTATTTTTTAATTCCTTTTATCTTAATTATAGCTATTTTGC AGTAAGGTTTTATGCTAAAA
Product: putative secreted lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKKLLSLVGILLMALLVTACGNDQAASDEKMEKDTYVADLQGAKLEATFSHVGDNVRKVDQKMVYPLDYLGLEEGVKVDD ATKKQLEEQVTSQYKGYKDGKGTSLETKFTDDGMELNMSVDLYKADKDAVGSLLVGTTDPKNVSYKDTVEQFEAQGFTKK
Sequences:
>Translated_160_residues MKKLLSLVGILLMALLVTACGNDQAASDEKMEKDTYVADLQGAKLEATFSHVGDNVRKVDQKMVYPLDYLGLEEGVKVDD ATKKQLEEQVTSQYKGYKDGKGTSLETKFTDDGMELNMSVDLYKADKDAVGSLLVGTTDPKNVSYKDTVEQFEAQGFTKK >Mature_160_residues MKKLLSLVGILLMALLVTACGNDQAASDEKMEKDTYVADLQGAKLEATFSHVGDNVRKVDQKMVYPLDYLGLEEGVKVDD ATKKQLEEQVTSQYKGYKDGKGTSLETKFTDDGMELNMSVDLYKADKDAVGSLLVGTTDPKNVSYKDTVEQFEAQGFTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17619; Mature: 17619
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSLVGILLMALLVTACGNDQAASDEKMEKDTYVADLQGAKLEATFSHVGDNVRKVD CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHH QKMVYPLDYLGLEEGVKVDDATKKQLEEQVTSQYKGYKDGKGTSLETKFTDDGMELNMSV HHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEE DLYKADKDAVGSLLVGTTDPKNVSYKDTVEQFEAQGFTKK EEEECCHHHHCEEEECCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKLLSLVGILLMALLVTACGNDQAASDEKMEKDTYVADLQGAKLEATFSHVGDNVRKVD CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHH QKMVYPLDYLGLEEGVKVDDATKKQLEEQVTSQYKGYKDGKGTSLETKFTDDGMELNMSV HHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEE DLYKADKDAVGSLLVGTTDPKNVSYKDTVEQFEAQGFTKK EEEECCHHHHCEEEECCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA