Click here to switch to the map view.

The map label for this gene is wapA [H]

Identifier: 116871560

GI number: 116871560

Start: 140815

End: 142842

Strand: Direct

Name: wapA [H]

Synonym: lwe0140

Alternate gene names: 116871560

Gene position: 140815-142842 (Clockwise)

Preceding gene: 116871559

Following gene: 116871563

Centisome position: 5.0

GC content: 34.76

Gene sequence:

>2028_bases
ATGAAAGAACGTACCAAAATGAAAAACAGTCTGAAAAAAGTTGGATTAGCTTTTCTCAGTGTCATTTTACTTGTAAACGT
TATATTTCAGACAAACTTTGTTAAAGCAGCAACTGATTATGGATCTGATTTTTTGCAATCAGTTGAGCTATTAGATGGAG
ATGGTAATCCGAAAACAGAATTTGGCTATTATGACAGTATTCAGATTCACTATACTTGGGCAATTCCCAATTCAACTAGT
GTTAAGGAAGGCGATACAATGCAATTTGTATTACCACAAGAACTGAAAATAGTAACAGATTTGAATTTTGATTTAAAAGA
TCATAATGGTAATACAGTAGGGAATGTAGTGGCAACGAAATCTACTGGGAAAGTTGTGATTACATTTACCGATTTTGTAG
AAAAAAATTCCGATATTAGTGGATATCTTGATTTTTGGAGTAACTGGGATAAATCGCTTGTAGATGGAAATGAAAAAGTA
CCTCTTGATTTTCCTGTAAATGGTAAGGTTGATACAATTACGGTAGATGTTGGTAGTGAAAATCAAATTAGTCCAGATGA
AACGCTCTATAAATATGGTTGGGCTAATGCAAAAGATCCCTCCGTTATACAGTGGGTTGTTCGACTTAACTATGCAAAAG
TAGACATCCAAAATGCCGTTTATGAGGATTTCGTTGGGCCAAATCAAGTGATTGATTTTAATTCTATCAAAGCATTTCAT
GGAGAATTTGATCCAAATGATAATTTTACGCCAGGAGTAGCTGTTCCATCATCAGACATTATCCAAACTGCTAATGGTTT
TAAAATAAATTTAGGCCATTTAACAGATTCTGTAAAGGTTTCTTATTATACAAATTCGACAGATAATGGAGCATCGCCAA
GTTATACAAATAAAGGTGAATTAACTGGGGATAATTACCAGTCACAACAAATTGAAGTAAACACACCAACTTCTGGAGGT
AGCGGTGGTGGAGAAGGTACTAACGGATCAGTAGAACTAACCAAAACAGACAATTCTGATCAAAAAAATCCTTTGGAAGG
AGCCGAATTTAAATTAGTAAATTCAGCTGGAACAACAATACAAGAAGGAATAAAAACTGGTACGTACGGAAAACTCACTA
TTTCTAGTTTGAAATATGATACATACAAACTAATTGAAACAAAAGCGCCAGCAGGTTATATATTAGATACAAAGCCAGTC
GAATTTACCATTGACAATGAACATCAATCTCTATTTGTATCCAAAGAAAATGCCCCGATGAAAGGCTCTGTATCACTTGT
GAAATCGGATAAAGAAACAGGCGCAACACTTGAGGGCGCAGAGTTTGAACTGCAAGATGAAACAGGAAATACACTTCAAA
CGGGGCTAAAAACAAATGCAGATGGAGTTTTAACAGTAGACAATTTAGCATTCGGTGATTATAAATTTGTAGAAACAAAA
GCACCCGCAAATTATATTCTTGATGCTACACCTATTCTCTTTACAATTGATGAAACGCACCAAAAGGTGACCGTTTCAAA
AGAAAATACATCAATAAAAGGCTCTGTAGCACTTGTGAAAATTGACAGTGAAACAAAAGAAAAACTTGCAGGAGCCGAAT
TTGAATTACAAGATGAGAATGGTGAGACTTTAAGAACTAACTTAAAAACGAATGAAGATGGCATGCTGTATGTGGATGAT
TTATTGCCTGGGAACTATCAATTCGTTGAAACAAAATCACCAGCAGGCTATATTTTAGATACAACACCTGTAAAATTCGA
AATCGAGATTGATAATAAGCAAATAGGTCTGCTTGTAACTAAAGAGAACACTAAGAAACCAGAAACACCAGAAACACCAA
ACATTCCTGATGAGCAGACTATTCCAAAAGCGCCAAATAATCCGAAAAAACCAGATACAATTGTCAGTTCAAGTAATCAT
TCACAAACATTACCAAAAACAGGAGATTCACCGCTTATCAATGGATTAGGTTTATTATTAGTAGCGATTTCTACAGGAGG
CTTGCTCATTTTTAGAAGAAAACAATAA

Upstream 100 bases:

>100_bases
CTGAAAAGTAATACAAATTTTATTAAATTATTGTATACTCACAATAAATTAGGAAGAAACTATTATTGTTGAAACTAACT
TGAAAAGGATGATTTTTATT

Downstream 100 bases:

>100_bases
AAAAATGGAACAGCAGACGATTTATCGTTTACTGTTCCATTTTTTATGTTAAAAATTCTAGTTCATCCAATGATTCCGCA
TCTATTTCAAAATGTTTATC

Product: cell wall surface anchor family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MKERTKMKNSLKKVGLAFLSVILLVNVIFQTNFVKAATDYGSDFLQSVELLDGDGNPKTEFGYYDSIQIHYTWAIPNSTS
VKEGDTMQFVLPQELKIVTDLNFDLKDHNGNTVGNVVATKSTGKVVITFTDFVEKNSDISGYLDFWSNWDKSLVDGNEKV
PLDFPVNGKVDTITVDVGSENQISPDETLYKYGWANAKDPSVIQWVVRLNYAKVDIQNAVYEDFVGPNQVIDFNSIKAFH
GEFDPNDNFTPGVAVPSSDIIQTANGFKINLGHLTDSVKVSYYTNSTDNGASPSYTNKGELTGDNYQSQQIEVNTPTSGG
SGGGEGTNGSVELTKTDNSDQKNPLEGAEFKLVNSAGTTIQEGIKTGTYGKLTISSLKYDTYKLIETKAPAGYILDTKPV
EFTIDNEHQSLFVSKENAPMKGSVSLVKSDKETGATLEGAEFELQDETGNTLQTGLKTNADGVLTVDNLAFGDYKFVETK
APANYILDATPILFTIDETHQKVTVSKENTSIKGSVALVKIDSETKEKLAGAEFELQDENGETLRTNLKTNEDGMLYVDD
LLPGNYQFVETKSPAGYILDTTPVKFEIEIDNKQIGLLVTKENTKKPETPETPNIPDEQTIPKAPNNPKKPDTIVSSSNH
SQTLPKTGDSPLINGLGLLLVAISTGGLLIFRRKQ

Sequences:

>Translated_675_residues
MKERTKMKNSLKKVGLAFLSVILLVNVIFQTNFVKAATDYGSDFLQSVELLDGDGNPKTEFGYYDSIQIHYTWAIPNSTS
VKEGDTMQFVLPQELKIVTDLNFDLKDHNGNTVGNVVATKSTGKVVITFTDFVEKNSDISGYLDFWSNWDKSLVDGNEKV
PLDFPVNGKVDTITVDVGSENQISPDETLYKYGWANAKDPSVIQWVVRLNYAKVDIQNAVYEDFVGPNQVIDFNSIKAFH
GEFDPNDNFTPGVAVPSSDIIQTANGFKINLGHLTDSVKVSYYTNSTDNGASPSYTNKGELTGDNYQSQQIEVNTPTSGG
SGGGEGTNGSVELTKTDNSDQKNPLEGAEFKLVNSAGTTIQEGIKTGTYGKLTISSLKYDTYKLIETKAPAGYILDTKPV
EFTIDNEHQSLFVSKENAPMKGSVSLVKSDKETGATLEGAEFELQDETGNTLQTGLKTNADGVLTVDNLAFGDYKFVETK
APANYILDATPILFTIDETHQKVTVSKENTSIKGSVALVKIDSETKEKLAGAEFELQDENGETLRTNLKTNEDGMLYVDD
LLPGNYQFVETKSPAGYILDTTPVKFEIEIDNKQIGLLVTKENTKKPETPETPNIPDEQTIPKAPNNPKKPDTIVSSSNH
SQTLPKTGDSPLINGLGLLLVAISTGGLLIFRRKQ
>Mature_675_residues
MKERTKMKNSLKKVGLAFLSVILLVNVIFQTNFVKAATDYGSDFLQSVELLDGDGNPKTEFGYYDSIQIHYTWAIPNSTS
VKEGDTMQFVLPQELKIVTDLNFDLKDHNGNTVGNVVATKSTGKVVITFTDFVEKNSDISGYLDFWSNWDKSLVDGNEKV
PLDFPVNGKVDTITVDVGSENQISPDETLYKYGWANAKDPSVIQWVVRLNYAKVDIQNAVYEDFVGPNQVIDFNSIKAFH
GEFDPNDNFTPGVAVPSSDIIQTANGFKINLGHLTDSVKVSYYTNSTDNGASPSYTNKGELTGDNYQSQQIEVNTPTSGG
SGGGEGTNGSVELTKTDNSDQKNPLEGAEFKLVNSAGTTIQEGIKTGTYGKLTISSLKYDTYKLIETKAPAGYILDTKPV
EFTIDNEHQSLFVSKENAPMKGSVSLVKSDKETGATLEGAEFELQDETGNTLQTGLKTNADGVLTVDNLAFGDYKFVETK
APANYILDATPILFTIDETHQKVTVSKENTSIKGSVALVKIDSETKEKLAGAEFELQDENGETLRTNLKTNEDGMLYVDD
LLPGNYQFVETKSPAGYILDTTPVKFEIEIDNKQIGLLVTKENTKKPETPETPNIPDEQTIPKAPNNPKKPDTIVSSSNH
SQTLPKTGDSPLINGLGLLLVAISTGGLLIFRRKQ

Specific function: Unknown

COG id: COG4932

COG function: function code M; Predicted outer membrane protein

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR008456
- InterPro:   IPR011252
- InterPro:   IPR019948
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF05737 Collagen_bind; PF00746 Gram_pos_anchor [H]

EC number: NA

Molecular weight: Translated: 73770; Mature: 73770

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50847 GRAM_POS_ANCHORING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERTKMKNSLKKVGLAFLSVILLVNVIFQTNFVKAATDYGSDFLQSVELLDGDGNPKTE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHEECCCCCCCCC
FGYYDSIQIHYTWAIPNSTSVKEGDTMQFVLPQELKIVTDLNFDLKDHNGNTVGNVVATK
CCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCEEEECCCCCEEEEEEEEC
STGKVVITFTDFVEKNSDISGYLDFWSNWDKSLVDGNEKVPLDFPVNGKVDTITVDVGSE
CCCEEEEEEEHHHCCCCCCCEEEHHHCCCCHHHHCCCCCCEEECCCCCCEEEEEEECCCC
NQISPDETLYKYGWANAKDPSVIQWVVRLNYAKVDIQNAVYEDFVGPNQVIDFNSIKAFH
CCCCCCHHHHEECCCCCCCCHHEEEEEEECEEEEEHHHHHHHHCCCCCCEEECCCEEEEC
GEFDPNDNFTPGVAVPSSDIIQTANGFKINLGHLTDSVKVSYYTNSTDNGASPSYTNKGE
CCCCCCCCCCCCEECCCHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCC
LTGDNYQSQQIEVNTPTSGGSGGGEGTNGSVELTKTDNSDQKNPLEGAEFKLVNSAGTTI
CCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCHH
QEGIKTGTYGKLTISSLKYDTYKLIETKAPAGYILDTKPVEFTIDNEHQSLFVSKENAPM
HHHCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEECCCEEEEECCCCEEEEEECCCCCC
KGSVSLVKSDKETGATLEGAEFELQDETGNTLQTGLKTNADGVLTVDNLAFGDYKFVETK
CCCEEEEECCCCCCCEECCCEEEEECCCCCHHHHCCCCCCCCEEEECCEECCCEEEEEEC
APANYILDATPILFTIDETHQKVTVSKENTSIKGSVALVKIDSETKEKLAGAEFELQDEN
CCCCEEEECCEEEEEEECCCCEEEEECCCCCEECEEEEEEECCHHHHHHCCCEEEEECCC
GETLRTNLKTNEDGMLYVDDLLPGNYQFVETKSPAGYILDTTPVKFEIEIDNKQIGLLVT
CCEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCEEEECCCEEEEEEECCCEEEEEEE
KENTKKPETPETPNIPDEQTIPKAPNNPKKPDTIVSSSNHSQTLPKTGDSPLINGLGLLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHEEEE
VAISTGGLLIFRRKQ
EEECCCCEEEEEECC
>Mature Secondary Structure
MKERTKMKNSLKKVGLAFLSVILLVNVIFQTNFVKAATDYGSDFLQSVELLDGDGNPKTE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHEECCCCCCCCC
FGYYDSIQIHYTWAIPNSTSVKEGDTMQFVLPQELKIVTDLNFDLKDHNGNTVGNVVATK
CCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCEEEECCCCCEEEEEEEEC
STGKVVITFTDFVEKNSDISGYLDFWSNWDKSLVDGNEKVPLDFPVNGKVDTITVDVGSE
CCCEEEEEEEHHHCCCCCCCEEEHHHCCCCHHHHCCCCCCEEECCCCCCEEEEEEECCCC
NQISPDETLYKYGWANAKDPSVIQWVVRLNYAKVDIQNAVYEDFVGPNQVIDFNSIKAFH
CCCCCCHHHHEECCCCCCCCHHEEEEEEECEEEEEHHHHHHHHCCCCCCEEECCCEEEEC
GEFDPNDNFTPGVAVPSSDIIQTANGFKINLGHLTDSVKVSYYTNSTDNGASPSYTNKGE
CCCCCCCCCCCCEECCCHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCC
LTGDNYQSQQIEVNTPTSGGSGGGEGTNGSVELTKTDNSDQKNPLEGAEFKLVNSAGTTI
CCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCHH
QEGIKTGTYGKLTISSLKYDTYKLIETKAPAGYILDTKPVEFTIDNEHQSLFVSKENAPM
HHHCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEECCCEEEEECCCCEEEEEECCCCCC
KGSVSLVKSDKETGATLEGAEFELQDETGNTLQTGLKTNADGVLTVDNLAFGDYKFVETK
CCCEEEEECCCCCCCEECCCEEEEECCCCCHHHHCCCCCCCCEEEECCEECCCEEEEEEC
APANYILDATPILFTIDETHQKVTVSKENTSIKGSVALVKIDSETKEKLAGAEFELQDEN
CCCCEEEECCEEEEEEECCCCEEEEECCCCCEECEEEEEEECCHHHHHHCCCEEEEECCC
GETLRTNLKTNEDGMLYVDDLLPGNYQFVETKSPAGYILDTTPVKFEIEIDNKQIGLLVT
CCEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCEEEECCCEEEEEEECCCEEEEEEE
KENTKKPETPETPNIPDEQTIPKAPNNPKKPDTIVSSSNHSQTLPKTGDSPLINGLGLLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHEEEE
VAISTGGLLIFRRKQ
EEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2761387; 12397186 [H]