Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871471

Identifier: 116871471

GI number: 116871471

Start: 50420

End: 50923

Strand: Direct

Name: 116871471

Synonym: lwe0049

Alternate gene names: NA

Gene position: 50420-50923 (Clockwise)

Preceding gene: 116871470

Following gene: 116871472

Centisome position: 1.79

GC content: 35.71

Gene sequence:

>504_bases
ATGAAATTTAAAATGGCAGCATTATTGCTATTAGTTTGCTTTGCTTTTTCTCCTAGTGTACTTGCGGCCGAATCGGATAG
TTATTTAGAAAACAGCGGAAAAATGGATATTAAAACCGATCGACTTCAAAAAACAGATGAAGAGAAGAAGAAAGAGCTTG
AAAAAATGGAAGAAACCGAACTTGATAAAAACGGTATCCCACTTTTTACAGATGAATGGGATAAAAAAGTATCTAAACAA
AAAGAAACAGAGAAAGCTGAATATGACCGTATTAAAAATGCTCTTTTTGAAGAAGAGCCCACTTCCGGAGAAACAGTGAA
AACAACAAAAGAAAAACTTTTTTCTGGAAAATATGAAACAACGAGTAATAAGGCTGCTATGACAACGAATACGGAAGATG
AAACTAAAAATACAAAGCAAAAAACAGTTGGCGGAGCAATCGCTGGAACACTCCTGGCATTAGCAGGTGGGATTTATGCA
GCAGCACGCAATGTTTTTGAATAG

Upstream 100 bases:

>100_bases
ATTGTTTATAGCTTAATTGGTGCAACAGTGTTATTTACTGCACTCAACCTGTTTGTTTGGCACCGTTCTAAAAATGAAGA
ACAAGAGGAGGAGCATTCGG

Downstream 100 bases:

>100_bases
AAGTGAGGAATTGAAATGGCTAAAAATACACATATGAATGTGACTGTTGATTTTACAAACTGGGGCGCAGATAAATACGA
TCTGCGCATTCCAGTACATC

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETELDKNGIPLFTDEWDKKVSKQ
KETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYETTSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYA
AARNVFE

Sequences:

>Translated_167_residues
MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETELDKNGIPLFTDEWDKKVSKQ
KETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYETTSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYA
AARNVFE
>Mature_167_residues
MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETELDKNGIPLFTDEWDKKVSKQ
KETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYETTSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYA
AARNVFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18654; Mature: 18654

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETE
CCHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHH
LDKNGIPLFTDEWDKKVSKQKETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYET
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
TSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYAAARNVFE
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFKMAALLLLVCFAFSPSVLAAESDSYLENSGKMDIKTDRLQKTDEEKKKELEKMEETE
CCHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHH
LDKNGIPLFTDEWDKKVSKQKETEKAEYDRIKNALFEEEPTSGETVKTTKEKLFSGKYET
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
TSNKAAMTTNTEDETKNTKQKTVGGAIAGTLLALAGGIYAAARNVFE
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA