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The map label for this gene is 116696387

Identifier: 116696387

GI number: 116696387

Start: 2770865

End: 2772040

Strand: Direct

Name: 116696387

Synonym: H16_B2451

Alternate gene names: NA

Gene position: 2770865-2772040 (Clockwise)

Preceding gene: 116696383

Following gene: 116696388

Centisome position: 95.14

GC content: 60.2

Gene sequence:

>1176_bases
ATGCAGTCAAAGCGGGGAAAAAGCACTAGCAAAGTGCGTAAGGTATGGCAAGTCACGTTGGCGGCCACCATCCTGAGCGG
ATGCGCGGAAAGCGCGCTCGCCCAGAGCAGCGTCACGCTTTATGGCTTCCTCTATAGCGGGGTGCGATATGTCAACAACA
GCGGTGGCCATCACGTGACGGGATTGGCAACCGGCCCATCGCGATGGGGCCTGAAAGGCCACGAAGACCTGGGGTCCGGA
TTGCGCGGCCTGTTTACGCTTGAGAGCGGCTTCGACATGAGCACGGGAAACTCACGGCAGGGTGGCAGGCTGTTTGGCCG
CCAGGCGTATGTCGGGCTCTCTGACCGTTCGGCGGGTACCGTGACACTTGGGCGCCAGTACGACCTGGTAGCGGAGTGGA
TCGCGCCGTTCACCCCACCTGGCAAGTGGAATGGCTATATGGCGCACGTCGGCGACAATGACAATACGAACTGGCAGTTC
CGCATCAACAATGCGGTCAAGTACGTGACGCCAAACTTCGGCGGCTTCCAGGCCGGCGCCATGTATGGTTTTGGCGAAGT
TGCAGGCGACAGCCACCGCAATTCGACCATGAGCTTTGGCGTTACCTACGCCGGCGGCCGTTTTCGCGCCGCCGCCGCTT
ACTTGCACATCGATAATCCTGCAAGTGCAGTTCCGGAGGGCAACTGGAATACCATCCTTTTCCCGGCCGTTTCAGCCACG
TCGCCACTGCAGCCGAATCGCATCGCCCCGTCGAGCATGTCGGTTGCCGCGCTTGCAGGCCAGTACGATCTCGACAAACT
CAAGCTCGCCGTGTCATTTACCCAGAGCCGCTACAAGGACTTGGGCGATGCCGCGGACGGGCTTACCAACGGTGATGTGC
GTTTCAACAATATCGACGTCAATGGCTCCTACAGCGTCGCGCCCGCCTGGCAGCTCGGCCTGGGGTACACGTACACAGCC
GGGAAGGTGCAACCGACCGGATTCACGCCGAAATATCACCAGGTCAATGCGGTAAGCAATTATTTCCTCTCCAAGCGAAC
CATTCTCCAGGCCGCCGTTGCGTACCAACGCGCAGCGGGGGACGCACAGAACGCCTACTTGCTGTTCGGCAGCAGCGGCG
CGTCCAGCACAAGCGGGCAGCTCATGTTGCTGGCGGGTATTTTCCACGTCTTCTAA

Upstream 100 bases:

>100_bases
CTGGCCTAGGCTGCGCTAGCCTCGTGCTGCCCGTGTTGTCAAGCCCGGCTCCATTGCGCCGGCACCGGACCGCGACCTGG
CACAAAAAAGGGGAGAGTCA

Downstream 100 bases:

>100_bases
CCGGGCCCCAGGCATCGCGGCACGGCGGGGAGATGGCCCCCGCCTTGCCGCAGCCTCGCCCAACCTGTTGCACTACTTGT
GATGAATCATGAATCCGTGC

Product: outer membrane porin protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MQSKRGKSTSKVRKVWQVTLAATILSGCAESALAQSSVTLYGFLYSGVRYVNNSGGHHVTGLATGPSRWGLKGHEDLGSG
LRGLFTLESGFDMSTGNSRQGGRLFGRQAYVGLSDRSAGTVTLGRQYDLVAEWIAPFTPPGKWNGYMAHVGDNDNTNWQF
RINNAVKYVTPNFGGFQAGAMYGFGEVAGDSHRNSTMSFGVTYAGGRFRAAAAYLHIDNPASAVPEGNWNTILFPAVSAT
SPLQPNRIAPSSMSVAALAGQYDLDKLKLAVSFTQSRYKDLGDAADGLTNGDVRFNNIDVNGSYSVAPAWQLGLGYTYTA
GKVQPTGFTPKYHQVNAVSNYFLSKRTILQAAVAYQRAAGDAQNAYLLFGSSGASSTSGQLMLLAGIFHVF

Sequences:

>Translated_391_residues
MQSKRGKSTSKVRKVWQVTLAATILSGCAESALAQSSVTLYGFLYSGVRYVNNSGGHHVTGLATGPSRWGLKGHEDLGSG
LRGLFTLESGFDMSTGNSRQGGRLFGRQAYVGLSDRSAGTVTLGRQYDLVAEWIAPFTPPGKWNGYMAHVGDNDNTNWQF
RINNAVKYVTPNFGGFQAGAMYGFGEVAGDSHRNSTMSFGVTYAGGRFRAAAAYLHIDNPASAVPEGNWNTILFPAVSAT
SPLQPNRIAPSSMSVAALAGQYDLDKLKLAVSFTQSRYKDLGDAADGLTNGDVRFNNIDVNGSYSVAPAWQLGLGYTYTA
GKVQPTGFTPKYHQVNAVSNYFLSKRTILQAAVAYQRAAGDAQNAYLLFGSSGASSTSGQLMLLAGIFHVF
>Mature_391_residues
MQSKRGKSTSKVRKVWQVTLAATILSGCAESALAQSSVTLYGFLYSGVRYVNNSGGHHVTGLATGPSRWGLKGHEDLGSG
LRGLFTLESGFDMSTGNSRQGGRLFGRQAYVGLSDRSAGTVTLGRQYDLVAEWIAPFTPPGKWNGYMAHVGDNDNTNWQF
RINNAVKYVTPNFGGFQAGAMYGFGEVAGDSHRNSTMSFGVTYAGGRFRAAAAYLHIDNPASAVPEGNWNTILFPAVSAT
SPLQPNRIAPSSMSVAALAGQYDLDKLKLAVSFTQSRYKDLGDAADGLTNGDVRFNNIDVNGSYSVAPAWQLGLGYTYTA
GKVQPTGFTPKYHQVNAVSNYFLSKRTILQAAVAYQRAAGDAQNAYLLFGSSGASSTSGQLMLLAGIFHVF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41721; Mature: 41721

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKRGKSTSKVRKVWQVTLAATILSGCAESALAQSSVTLYGFLYSGVRYVNNSGGHHVT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCEECCCCCCEEE
GLATGPSRWGLKGHEDLGSGLRGLFTLESGFDMSTGNSRQGGRLFGRQAYVGLSDRSAGT
EEECCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCCE
VTLGRQYDLVAEWIAPFTPPGKWNGYMAHVGDNDNTNWQFRINNAVKYVTPNFGGFQAGA
EEECCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCCC
MYGFGEVAGDSHRNSTMSFGVTYAGGRFRAAAAYLHIDNPASAVPEGNWNTILFPAVSAT
EECCHHHCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCHHCCCCCCCCEEEEEECCCC
SPLQPNRIAPSSMSVAALAGQYDLDKLKLAVSFTQSRYKDLGDAADGLTNGDVRFNNIDV
CCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEEC
NGSYSVAPAWQLGLGYTYTAGKVQPTGFTPKYHQVNAVSNYFLSKRTILQAAVAYQRAAG
CCCEEECCCEEECCCEEEECCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
DAQNAYLLFGSSGASSTSGQLMLLAGIFHVF
CCCCEEEEEECCCCCCCCCCEEEEHHHHHHC
>Mature Secondary Structure
MQSKRGKSTSKVRKVWQVTLAATILSGCAESALAQSSVTLYGFLYSGVRYVNNSGGHHVT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCEECCCCCCEEE
GLATGPSRWGLKGHEDLGSGLRGLFTLESGFDMSTGNSRQGGRLFGRQAYVGLSDRSAGT
EEECCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCCE
VTLGRQYDLVAEWIAPFTPPGKWNGYMAHVGDNDNTNWQFRINNAVKYVTPNFGGFQAGA
EEECCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCCC
MYGFGEVAGDSHRNSTMSFGVTYAGGRFRAAAAYLHIDNPASAVPEGNWNTILFPAVSAT
EECCHHHCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCHHCCCCCCCCEEEEEECCCC
SPLQPNRIAPSSMSVAALAGQYDLDKLKLAVSFTQSRYKDLGDAADGLTNGDVRFNNIDV
CCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEEC
NGSYSVAPAWQLGLGYTYTAGKVQPTGFTPKYHQVNAVSNYFLSKRTILQAAVAYQRAAG
CCCEEECCCEEECCCEEEECCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
DAQNAYLLFGSSGASSTSGQLMLLAGIFHVF
CCCCEEEEEECCCCCCCCCCEEEEHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]