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The map label for this gene is yigC [C]

Identifier: 116696382

GI number: 116696382

Start: 2765467

End: 2766804

Strand: Direct

Name: yigC [C]

Synonym: H16_B2446

Alternate gene names: 116696382

Gene position: 2765467-2766804 (Clockwise)

Preceding gene: 116696377

Following gene: 116696383

Centisome position: 94.95

GC content: 60.76

Gene sequence:

>1338_bases
ATGAGGCACTACTTGAGCCGTCTGCAAGCACGCGGCGACCTGGCAATTGTGGAGCGCGAAGTCGATCCCCGTTTCGAAGC
GGCTGCGGTCGCGCGGCAACTGCAACGTGTCTCGAACCAGGCCGTGCTCTTCAAGAACGTGCGTGGCTCCGCACTTCCGG
TTGTCATGAACCTGTATAGCGACCATGAGCGGCTGCGCGAGATGATTCGTTGCGGTACGCGCACCTTCTGCGAGCGGCTG
GACGAGGAAATTGAAGTCGCTGCCACGCTTCAAACCTATGCGGAAGAGGATACTCAGCCCGAGCGCCTCCGGAGCGGGAA
GCTCAGCGACCTGCCGATCCTGACTTACCACGAGCGGGACGGCGCCCCGTACATTACGTCCGGCGTGTTTCTCGCACGTG
ACCCTGACACAGGCGTGCCTAACCTGTCGTTCCATCGCTCAATGGTAATTTCCGATAATGAACTACGAATTCGGCTGGGA
AGCTCACACGATCTCGCCCGCTATCAGGCAGCTGCCGAACGCCAGGGAAAGGCGCTGGAAGCCGCCATTCTGATCGGCGC
CCCTCCCGAAGTCTTCATGTCGGCCTGCGTCTCGCTGCCGCCCCAGGCAAACGAGCTGGCACTGGCCTCCGCGATGCGAG
GCGGCCCTTTGCGCACACGCCGGTGCCAGACCATCGATCTTTCCGTTCCCGCCGCGACCGACATCGTGATTGAAGGCCGG
ATCCTCCCAAACGTGCGCCGCCCGGAAGGTCCTTTCGGCGAATTCATGGGCTATTACGTCGATGTGGGTGACAACCACGT
ATTCGAAGTCACGCACGTCGCCTGGCGCACCGGAGCAATCTTCCAGGGCCTGATCTGCGGCTCTGACGAAGACCTGCGGC
CGCTCGAGGCCGCCACCGCCGCGCGCATCTATCGCGCCATCAAGGGACAGGTACCGGGCATCATCGATGTGTCCTGCAAG
CCCACGGTGATGAACACCGTCATCAAGCTCCGGAAGCAGTACGAGGGGCACGCACAGCATGCGCTGCTCGCGGCAATGGG
CGCGCATCTTGACTACAACAAGCTTTGCATCGTGGTTGACGAAGATGTCGACATCTACAACCTGGATGAAGTGATCTGGG
CTTTCGTGACGCGGGGGCGTGCAGACACCCGAACCATGGTGCTGAACAATGTCCCGGGCTTCTACCGCGATCCGCACAAA
GATCACTGGGGCCGCCTTGCCATTGATGCGACTAAACCATGGGGACGCGAAGCGGAGTTTGAACGAAAGCGCATTCCAGG
CGAAGTGGAAATTGAACTTGGCAAGTATCTGCCCGCTTTTGCGTCGGAGGTGCGCTGA

Upstream 100 bases:

>100_bases
ATTGAGTTCGGATTTCCTATGTTCCCAGCGCTACCGCACAGGCTGGACAGGTGCCCGTTAAGGTAACGTCAGCCTACCTT
CCGAACTATCCGAGAAAACC

Downstream 100 bases:

>100_bases
CATGAGCAAGGACCGCACCCGCATAGTCGTTGGCATCAGCGGTGCCACCGGTGCCATCTACGGTGTCCGGCTGCTGGAAG
CCTTGCGGCTGCTCGATGTC

Product: 4-hydroxybenzoate decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: ORF-B(T) [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MRHYLSRLQARGDLAIVEREVDPRFEAAAVARQLQRVSNQAVLFKNVRGSALPVVMNLYSDHERLREMIRCGTRTFCERL
DEEIEVAATLQTYAEEDTQPERLRSGKLSDLPILTYHERDGAPYITSGVFLARDPDTGVPNLSFHRSMVISDNELRIRLG
SSHDLARYQAAAERQGKALEAAILIGAPPEVFMSACVSLPPQANELALASAMRGGPLRTRRCQTIDLSVPAATDIVIEGR
ILPNVRRPEGPFGEFMGYYVDVGDNHVFEVTHVAWRTGAIFQGLICGSDEDLRPLEAATAARIYRAIKGQVPGIIDVSCK
PTVMNTVIKLRKQYEGHAQHALLAAMGAHLDYNKLCIVVDEDVDIYNLDEVIWAFVTRGRADTRTMVLNNVPGFYRDPHK
DHWGRLAIDATKPWGREAEFERKRIPGEVEIELGKYLPAFASEVR

Sequences:

>Translated_445_residues
MRHYLSRLQARGDLAIVEREVDPRFEAAAVARQLQRVSNQAVLFKNVRGSALPVVMNLYSDHERLREMIRCGTRTFCERL
DEEIEVAATLQTYAEEDTQPERLRSGKLSDLPILTYHERDGAPYITSGVFLARDPDTGVPNLSFHRSMVISDNELRIRLG
SSHDLARYQAAAERQGKALEAAILIGAPPEVFMSACVSLPPQANELALASAMRGGPLRTRRCQTIDLSVPAATDIVIEGR
ILPNVRRPEGPFGEFMGYYVDVGDNHVFEVTHVAWRTGAIFQGLICGSDEDLRPLEAATAARIYRAIKGQVPGIIDVSCK
PTVMNTVIKLRKQYEGHAQHALLAAMGAHLDYNKLCIVVDEDVDIYNLDEVIWAFVTRGRADTRTMVLNNVPGFYRDPHK
DHWGRLAIDATKPWGREAEFERKRIPGEVEIELGKYLPAFASEVR
>Mature_445_residues
MRHYLSRLQARGDLAIVEREVDPRFEAAAVARQLQRVSNQAVLFKNVRGSALPVVMNLYSDHERLREMIRCGTRTFCERL
DEEIEVAATLQTYAEEDTQPERLRSGKLSDLPILTYHERDGAPYITSGVFLARDPDTGVPNLSFHRSMVISDNELRIRLG
SSHDLARYQAAAERQGKALEAAILIGAPPEVFMSACVSLPPQANELALASAMRGGPLRTRRCQTIDLSVPAATDIVIEGR
ILPNVRRPEGPFGEFMGYYVDVGDNHVFEVTHVAWRTGAIFQGLICGSDEDLRPLEAATAARIYRAIKGQVPGIIDVSCK
PTVMNTVIKLRKQYEGHAQHALLAAMGAHLDYNKLCIVVDEDVDIYNLDEVIWAFVTRGRADTRTMVLNNVPGFYRDPHK
DHWGRLAIDATKPWGREAEFERKRIPGEVEIELGKYLPAFASEVR

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=463, Percent_Identity=28.9416846652268, Blast_Score=186, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6320748, Length=434, Percent_Identity=25.1152073732719, Blast_Score=107, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 49814; Mature: 49814

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHYLSRLQARGDLAIVEREVDPRFEAAAVARQLQRVSNQAVLFKNVRGSALPVVMNLYS
CCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH
DHERLREMIRCGTRTFCERLDEEIEVAATLQTYAEEDTQPERLRSGKLSDLPILTYHERD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCC
GAPYITSGVFLARDPDTGVPNLSFHRSMVISDNELRIRLGSSHDLARYQAAAERQGKALE
CCCEEECCEEEEECCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCEEE
AAILIGAPPEVFMSACVSLPPQANELALASAMRGGPLRTRRCQTIDLSVPAATDIVIEGR
EEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECE
ILPNVRRPEGPFGEFMGYYVDVGDNHVFEVTHVAWRTGAIFQGLICGSDEDLRPLEAATA
ECCCCCCCCCCHHHHCEEEEECCCCEEEEEEHHHHHHCHHHEEEEECCCCCCCHHHHHHH
ARIYRAIKGQVPGIIDVSCKPTVMNTVIKLRKQYEGHAQHALLAAMGAHLDYNKLCIVVD
HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEE
EDVDIYNLDEVIWAFVTRGRADTRTMVLNNVPGFYRDPHKDHWGRLAIDATKPWGREAEF
CCCCEECHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCH
ERKRIPGEVEIELGKYLPAFASEVR
HHHCCCCEEEEEHHHCCHHHHHHCC
>Mature Secondary Structure
MRHYLSRLQARGDLAIVEREVDPRFEAAAVARQLQRVSNQAVLFKNVRGSALPVVMNLYS
CCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH
DHERLREMIRCGTRTFCERLDEEIEVAATLQTYAEEDTQPERLRSGKLSDLPILTYHERD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCC
GAPYITSGVFLARDPDTGVPNLSFHRSMVISDNELRIRLGSSHDLARYQAAAERQGKALE
CCCEEECCEEEEECCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCEEE
AAILIGAPPEVFMSACVSLPPQANELALASAMRGGPLRTRRCQTIDLSVPAATDIVIEGR
EEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECE
ILPNVRRPEGPFGEFMGYYVDVGDNHVFEVTHVAWRTGAIFQGLICGSDEDLRPLEAATA
ECCCCCCCCCCHHHHCEEEEECCCCEEEEEEHHHHHHCHHHEEEEECCCCCCCHHHHHHH
ARIYRAIKGQVPGIIDVSCKPTVMNTVIKLRKQYEGHAQHALLAAMGAHLDYNKLCIVVD
HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEE
EDVDIYNLDEVIWAFVTRGRADTRTMVLNNVPGFYRDPHKDHWGRLAIDATKPWGREAEF
CCCCEECHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCH
ERKRIPGEVEIELGKYLPAFASEVR
HHHCCCCEEEEEHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463; 3936936 [H]