| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is bugT [H]
Identifier: 116696377
GI number: 116696377
Start: 2759680
End: 2760636
Strand: Direct
Name: bugT [H]
Synonym: H16_B2441
Alternate gene names: 116696377
Gene position: 2759680-2760636 (Clockwise)
Preceding gene: 116696376
Following gene: 116696382
Centisome position: 94.75
GC content: 62.59
Gene sequence:
>957_bases TTGGCACGCTGTCTTGTGGTGTTACCCATGGCGCTCGCTGCACAGACCGGTATGGCGCAGGAGGGTCCTGTCAGGATCCT CGTCGGTTTCCCGCCGGGCGGCGTGACCGACGTCGTTGCTCGCCTGCTGGCCAAAGGCATGCAGGCAGAAATCGCGAGAC CAGTCATTGTGGAAAATCGTCCAGGAGCCGGCGGTCAAATCGCGGCACAAGTCCTCAAATCCGCCCGCCCCGACGGCAAT ACACTGTTCCTGACCAACAGTCATACCACTGCCATGATTCCCTTTACGAATCTCCATCCGGGATTTGACCCCCAGAAGGA CTTCGTTCCAGTTGGCCTGGTAGGGACGATGCCGAACTTCTTCGTCGTGAATCCGGAAATGGTAGGGCCCGAAGTCGACA GCCTGAAGGCCTTTTCTCAATGGGCAAGAGCAAAGGCCGGCCGGGGCAACGTCGGCGTTCCCGCACCGGCGAGCGCGCCG GAGTTCTCCATCTCGCTGCTGAACAAGGCCTTCGACGCGGACCTCAAGGCCGTTGCCTACAAGGGAGATGCGCCGATGGT GCAGGACCTGCTGGCAGGACAGATTCCCGCGGGGATCTGCGCAATGGCCGCCGCGCTGCCTCACGTCCGCGCCGGCAAGC TCAAGCTTCTGGCTGTCGATGGACCGGAACGGCTGCCTGGCTTTGACGTCCCCACCTACGCCGAGCGCGGGGTCAACGGC CTGAGCGATGCCATGACAATCGGCATCGTCGCGCCGGCCGGCATCGCGCCGGCGCTGGTGACAAAGTACAACACAGCCAT CAACAAGGTCGTCGGATCGAGGGCCTTCCAGGATCGGGTTGCCGAATCCGGCATCATCGCCAGCACTGGCACTCCGGATG ACATGGCGCGCGTTACGGAAGGCAGCAGGAAGGCCAATGCCCAGTTGGTGAAAGCGGCCGGATACCAGCCGCAGTAA
Upstream 100 bases:
>100_bases GAAACGGGTTCCAAATCAACTTTGCCTCCATTGGAGGCAAAGTGCAGCCTGAGACTAATTCCTAACCACATCAACTCCCA TGAAACCATTCATCGCTTCG
Downstream 100 bases:
>100_bases CGGCTCTGCGGCAGACTGTCAGTATCAGTCTGCCGCAGCATCGCCGGGGTCAGGACATGGCGTCAATCGTAGCAGGCAGG GCTCACGCTCGCGTGCAGCC
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MARCLVVLPMALAAQTGMAQEGPVRILVGFPPGGVTDVVARLLAKGMQAEIARPVIVENRPGAGGQIAAQVLKSARPDGN TLFLTNSHTTAMIPFTNLHPGFDPQKDFVPVGLVGTMPNFFVVNPEMVGPEVDSLKAFSQWARAKAGRGNVGVPAPASAP EFSISLLNKAFDADLKAVAYKGDAPMVQDLLAGQIPAGICAMAAALPHVRAGKLKLLAVDGPERLPGFDVPTYAERGVNG LSDAMTIGIVAPAGIAPALVTKYNTAINKVVGSRAFQDRVAESGIIASTGTPDDMARVTEGSRKANAQLVKAAGYQPQ
Sequences:
>Translated_318_residues MARCLVVLPMALAAQTGMAQEGPVRILVGFPPGGVTDVVARLLAKGMQAEIARPVIVENRPGAGGQIAAQVLKSARPDGN TLFLTNSHTTAMIPFTNLHPGFDPQKDFVPVGLVGTMPNFFVVNPEMVGPEVDSLKAFSQWARAKAGRGNVGVPAPASAP EFSISLLNKAFDADLKAVAYKGDAPMVQDLLAGQIPAGICAMAAALPHVRAGKLKLLAVDGPERLPGFDVPTYAERGVNG LSDAMTIGIVAPAGIAPALVTKYNTAINKVVGSRAFQDRVAESGIIASTGTPDDMARVTEGSRKANAQLVKAAGYQPQ >Mature_317_residues ARCLVVLPMALAAQTGMAQEGPVRILVGFPPGGVTDVVARLLAKGMQAEIARPVIVENRPGAGGQIAAQVLKSARPDGNT LFLTNSHTTAMIPFTNLHPGFDPQKDFVPVGLVGTMPNFFVVNPEMVGPEVDSLKAFSQWARAKAGRGNVGVPAPASAPE FSISLLNKAFDADLKAVAYKGDAPMVQDLLAGQIPAGICAMAAALPHVRAGKLKLLAVDGPERLPGFDVPTYAERGVNGL SDAMTIGIVAPAGIAPALVTKYNTAINKVVGSRAFQDRVAESGIIASTGTPDDMARVTEGSRKANAQLVKAAGYQPQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 32952; Mature: 32820
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARCLVVLPMALAAQTGMAQEGPVRILVGFPPGGVTDVVARLLAKGMQAEIARPVIVENR CCCEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHCCCEEEECC PGAGGQIAAQVLKSARPDGNTLFLTNSHTTAMIPFTNLHPGFDPQKDFVPVGLVGTMPNF CCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCE FVVNPEMVGPEVDSLKAFSQWARAKAGRGNVGVPAPASAPEFSISLLNKAFDADLKAVAY EEECCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE KGDAPMVQDLLAGQIPAGICAMAAALPHVRAGKLKLLAVDGPERLPGFDVPTYAERGVNG CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCC LSDAMTIGIVAPAGIAPALVTKYNTAINKVVGSRAFQDRVAESGIIASTGTPDDMARVTE HHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHC GSRKANAQLVKAAGYQPQ CCCHHHHHHHCCCCCCCC >Mature Secondary Structure ARCLVVLPMALAAQTGMAQEGPVRILVGFPPGGVTDVVARLLAKGMQAEIARPVIVENR CCEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHCCCEEEECC PGAGGQIAAQVLKSARPDGNTLFLTNSHTTAMIPFTNLHPGFDPQKDFVPVGLVGTMPNF CCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCE FVVNPEMVGPEVDSLKAFSQWARAKAGRGNVGVPAPASAPEFSISLLNKAFDADLKAVAY EEECCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE KGDAPMVQDLLAGQIPAGICAMAAALPHVRAGKLKLLAVDGPERLPGFDVPTYAERGVNG CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCC LSDAMTIGIVAPAGIAPALVTKYNTAINKVVGSRAFQDRVAESGIIASTGTPDDMARVTE HHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHC GSRKANAQLVKAAGYQPQ CCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]