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The map label for this gene is nirH [H]

Identifier: 116696218

GI number: 116696218

Start: 2581460

End: 2581960

Strand: Direct

Name: nirH [H]

Synonym: H16_B2282

Alternate gene names: 116696218

Gene position: 2581460-2581960 (Clockwise)

Preceding gene: 116696217

Following gene: 116696219

Centisome position: 88.63

GC content: 70.06

Gene sequence:

>501_bases
ATGCCCAAGCCTGTCGATCCCGTCGACCTGGCGCTGATCCGCGCCACGCAAGCAGGACTCCCGTTGGTGCCGGCGCCCTA
CGCGGCAGTGGCCGGCGCACTCGGCCTGACCGAACAGGAAGTGATGGCGCGGCTCGCCGCGATGCATGCGCGCGGCGTGC
TGCGTCGTATCGGCGCCGTTCCCAACCACTACCGGCTGGGCTGGCGCGCCAACGGCATGACCGTGTGGGACGTGGACGAT
GCGTTCATCGACATGCTCGGCGAGCGCATCGGCGCCCTGCCCTTCGTCAGCCATTGCTATCGCCGTCCGCGCCACTTGCC
GCATTGGCCCTACAACCTGTTCGCGATGGTCCATGCGCGCTCCCGCCAGGACGCCGCGCCGCAGGTTGCCGCGATCGCGG
CACTGCTTGGCGACGCCTGCCGCGCGCACGACGTGCTGTGGTCCACCCGCATCCTCAAGAAAACGGGGCTGCGCCTGCCG
CCGCCCGGCCCAGACCAATAG

Upstream 100 bases:

>100_bases
TCGCGCCGGTACTCGCGCGCATCGCGGCGGCGGCCGGCGTCGAGATCCTGCCGTTCCCGAAGGAACGCGAGTTCTTCGTC
AACCTCTACCTGCCCGCCTG

Downstream 100 bases:

>100_bases
GAAACCCCGCCCATGTTCCGCCTGTCCCGCTTCATGGAAGCCCTGCGCGATGCCGGCCCGGTGCCGCCGCCGCGCAAGCC
CGCCGGCCCGGTGGTGATCT

Product: heme d1 biosynthesis protein (NirH)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPKPVDPVDLALIRATQAGLPLVPAPYAAVAGALGLTEQEVMARLAAMHARGVLRRIGAVPNHYRLGWRANGMTVWDVDD
AFIDMLGERIGALPFVSHCYRRPRHLPHWPYNLFAMVHARSRQDAAPQVAAIAALLGDACRAHDVLWSTRILKKTGLRLP
PPGPDQ

Sequences:

>Translated_166_residues
MPKPVDPVDLALIRATQAGLPLVPAPYAAVAGALGLTEQEVMARLAAMHARGVLRRIGAVPNHYRLGWRANGMTVWDVDD
AFIDMLGERIGALPFVSHCYRRPRHLPHWPYNLFAMVHARSRQDAAPQVAAIAALLGDACRAHDVLWSTRILKKTGLRLP
PPGPDQ
>Mature_165_residues
PKPVDPVDLALIRATQAGLPLVPAPYAAVAGALGLTEQEVMARLAAMHARGVLRRIGAVPNHYRLGWRANGMTVWDVDDA
FIDMLGERIGALPFVSHCYRRPRHLPHWPYNLFAMVHARSRQDAAPQVAAIAALLGDACRAHDVLWSTRILKKTGLRLPP
PGPDQ

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18186; Mature: 18055

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00519 HTH_ASNC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPVDPVDLALIRATQAGLPLVPAPYAAVAGALGLTEQEVMARLAAMHARGVLRRIGAV
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PNHYRLGWRANGMTVWDVDDAFIDMLGERIGALPFVSHCYRRPRHLPHWPYNLFAMVHAR
CCCEECCEEECCCEEEECHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
SRQDAAPQVAAIAALLGDACRAHDVLWSTRILKKTGLRLPPPGPDQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PKPVDPVDLALIRATQAGLPLVPAPYAAVAGALGLTEQEVMARLAAMHARGVLRRIGAV
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PNHYRLGWRANGMTVWDVDDAFIDMLGERIGALPFVSHCYRRPRHLPHWPYNLFAMVHAR
CCCEECCEEECCCEEEECHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
SRQDAAPQVAAIAALLGDACRAHDVLWSTRILKKTGLRLPPPGPDQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8982003; 10984043 [H]