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The map label for this gene is nrtB [H]

Identifier: 116696181

GI number: 116696181

Start: 2544716

End: 2545561

Strand: Direct

Name: nrtB [H]

Synonym: H16_B2245

Alternate gene names: 116696181

Gene position: 2544716-2545561 (Clockwise)

Preceding gene: 116696180

Following gene: 116696182

Centisome position: 87.37

GC content: 69.86

Gene sequence:

>846_bases
ATGACCTCGATCAGCCTTGAAGCGGGGGCGCCCCCGGTGGCACCGGCCGCGCCGGGCGCGGCACGCGTGCGGCTGGCACG
CTGGCTGGTGCGCCTGGCCGCGCTGGCCAGCTGCATCGTGCTGTGGCAGCTGGCCTCGTCCCACCGGGCCCACCTCGGCC
TCGTCACCTTCGCCAACGTGCCCGCGCCCAGCGACGTGGTTCCGGCGGCCTGGCAACTGCTGCAGTCACCCAAGCTGGTG
CTGCACCTGAGCAACAGCCTGTACCGCGTGTTTGCCGGCTTTGGCGCGGCGGCCGTGGCTGGCATCGTGCTCGGCATGGC
GATCGGCCGCTCGCGCTGGCTGGAAGACCTGCTGCTGCCACCGCTGGAGGTGCTGCGCCCGATCCCCGGCGTGGCGTGGA
TTCCGCTGGCAATCCTGATGTTCCCGTCTTCGGAGCTGAGCATGATCTTCATCACCTTCATCGGGGCGCTGTTCCCGATC
CTGCTCAACACCATCCACGGCGTGGAGCGCACCGACCCGCGCCTGGTCGCCACGGCGCGCAGCCTGGGCGCGCGCCGCTG
GACCGTCTTCCCCGAGGTGCTGCTGCCCGCGGCGCTGCCGAGTATCGTCACCGGGCTGGCGATCGGCATGGGCACGTCCT
GGTTCTGCCTGGTCACCGCCGAGATGATCGCCGGCCAGTACGGCATCGGCTACTACACGTGGGAGGCCTACAACCTGCAG
AACTATGCAGACATCGTCGTCGGCATGCTCCTGATCGGTGCCTTCGGCATGGGCAGCAGCGCGCTGATCAAGCGCCTCGG
CGCGTGGCTGATGCCGTGGACCCGCCTGCAGCAGGTGCGCGCATGA

Upstream 100 bases:

>100_bases
CGGATGGCTGGGCAAAGGCCAATGGTGGCAATGTGCGGGACTTTGCCGCAGTCAGCGGCGCCGCGGTCGCCGTGGCCAGC
AACTGACGCGGAGCGCGCCC

Downstream 100 bases:

>100_bases
CGAGCCAACCGATCCGCGCGGGCCACCTGCAGGTGCGCGGCCTGGATGTGGCGCTGGGCCAGGGCGATGCCGCCTTCACC
GCCGTGCACCAGCTATCCAT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTSISLEAGAPPVAPAAPGAARVRLARWLVRLAALASCIVLWQLASSHRAHLGLVTFANVPAPSDVVPAAWQLLQSPKLV
LHLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAILMFPSSELSMIFITFIGALFPI
LLNTIHGVERTDPRLVATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAGQYGIGYYTWEAYNLQ
NYADIVVGMLLIGAFGMGSSALIKRLGAWLMPWTRLQQVRA

Sequences:

>Translated_281_residues
MTSISLEAGAPPVAPAAPGAARVRLARWLVRLAALASCIVLWQLASSHRAHLGLVTFANVPAPSDVVPAAWQLLQSPKLV
LHLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAILMFPSSELSMIFITFIGALFPI
LLNTIHGVERTDPRLVATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAGQYGIGYYTWEAYNLQ
NYADIVVGMLLIGAFGMGSSALIKRLGAWLMPWTRLQQVRA
>Mature_280_residues
TSISLEAGAPPVAPAAPGAARVRLARWLVRLAALASCIVLWQLASSHRAHLGLVTFANVPAPSDVVPAAWQLLQSPKLVL
HLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAILMFPSSELSMIFITFIGALFPIL
LNTIHGVERTDPRLVATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAGQYGIGYYTWEAYNLQN
YADIVVGMLLIGAFGMGSSALIKRLGAWLMPWTRLQQVRA

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=248, Percent_Identity=37.9032258064516, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1786564, Length=155, Percent_Identity=38.0645161290323, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30200; Mature: 30069

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSISLEAGAPPVAPAAPGAARVRLARWLVRLAALASCIVLWQLASSHRAHLGLVTFANV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
PAPSDVVPAAWQLLQSPKLVLHLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLP
CCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PLEVLRPIPGVAWIPLAILMFPSSELSMIFITFIGALFPILLNTIHGVERTDPRLVATAR
CHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
SLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAGQYGIGYYTWEAYNLQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCH
NYADIVVGMLLIGAFGMGSSALIKRLGAWLMPWTRLQQVRA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
TSISLEAGAPPVAPAAPGAARVRLARWLVRLAALASCIVLWQLASSHRAHLGLVTFANV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
PAPSDVVPAAWQLLQSPKLVLHLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLP
CCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PLEVLRPIPGVAWIPLAILMFPSSELSMIFITFIGALFPILLNTIHGVERTDPRLVATAR
CHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
SLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAGQYGIGYYTWEAYNLQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCH
NYADIVVGMLLIGAFGMGSSALIKRLGAWLMPWTRLQQVRA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]