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The map label for this gene is ssuA [H]

Identifier: 116696180

GI number: 116696180

Start: 2543280

End: 2544701

Strand: Direct

Name: ssuA [H]

Synonym: H16_B2244

Alternate gene names: 116696180

Gene position: 2543280-2544701 (Clockwise)

Preceding gene: 116696179

Following gene: 116696181

Centisome position: 87.32

GC content: 67.16

Gene sequence:

>1422_bases
ATGAAAGCCTCCACCAGCATCCACCTGCTGCTGGCACTGGCCGCCGCCAGCCTGGCCGGCACGGCCAGTGCCGAAACCAT
CCGCGTTGCCATCGGCACGCAGGACACCACCATCAACTGCGCCACCGGCGGCCTGCTGATCCGCGAACTGAAGCTGCTCG
ACAAGTACCTGCCCCGCACCGGCAAGTACAAGGACGTCACCTACGACGTGCAATGGAAGAACTTCACCTCCGGCCCGCCG
CTGACCAACGAGATGGTGGCCGACAAGCTGGATATCGGCGCCATGGCGGATTTCCCCGGCTCGCTCAATGCCGCTGCCTT
CCAGAAGGCCGGCAAGAAGAGCCTGTTCATCGCGCCGCTGTCGGGCAACGCGATCGGCACCGGCAACGGCATCGTGGTGC
CGGCGGATTCGCCGGTCCAGTCGCTGGCGGAGCTCAGGGGCAAGACCATCTCGGTGCCGTTCGGCTCCACCGCGCACGGC
ATGCTGCTGCGCGCGATCAAGCGCCAGGGCTGGGACCCGGACAAGGACGTGACCCTGGTGTCGCAGTCGCCCGAGGTCGG
CGGCTCGGCGCTGCAGGCACACAAGGTGGACGGCCATGCCAACTTCGTGCCCTTCCCCGAGCTCTTTGTCTTCCGCGGCT
TTGCCCGCAAGATCTATGACGGCGCCCAGGCCGAGGCCCCCACCTTCCACGGCGCGCTGGTGAACGCGGAATACGCGCAG
AAGTACCCGGAGATCGTGGTGGCCTACCTGCGCGCCGCGATCGAGGCCGACCGCCTGATGGCGGCGGAGCCCGAGAAATA
CAGCGAGCTGATTGCCCGGGTGACCGGCATCGACGCCGAGGTGGACTACCTGTTCCATGGCCCGCTCGGCCTGCAGAACC
GCGACTACACCTGGAAGCCGGAGTACCGCCAGGCGCTGCAGACCTCGATCGAGACGCTGAAGCTGCTCAAGCGCACCGAT
GCCGACCTCAGCGCCGACACCGTGATCGACGAGCGCTACATCCGCGAAGCCTTCAGGCTGGAGGGGCTGGACTATGAAGC
GCGCCTGAAGTCCTACGACAAACAGCCCCTCGCGGCGAAGGACGCGGGCAGCGGCAAACCCATCGCCGAGCCGAAGCTGG
CCGCGCAGCTGTGGCTGCGGGGCGAGTCCAGGGTGCGCGCCTATGCCTCGCCGGCTGCAGCATTCGCCGCGCTCAGGCAG
GCTGCAAAAGAGGGCAAGCAGGCGCGCGTGCTGTATGTGCATGACCGCAATACCGGCCTGAAGCTGCTGGCCAGCAAGGC
GTGGTACGTGCAGGACGGCAAGGGGCAGGCGAGCGCCTTCCTGCTCAAGGGCTCAGCGGATGGCTGGGCAAAGGCCAATG
GTGGCAATGTGCGGGACTTTGCCGCAGTCAGCGGCGCCGCGGTCGCCGTGGCCAGCAACTGA

Upstream 100 bases:

>100_bases
TGCGAGAAGGATTGCCCGACGGGCGCGGTCAGGGTCGAGATCCCGTACCTGCTGCGTTGATTGCCCCGCTTCATGACAAC
AGCACCACAGAGATAACCCC

Downstream 100 bases:

>100_bases
CGCGGAGCGCGCCCATGACCTCGATCAGCCTTGAAGCGGGGGCGCCCCCGGTGGCACCGGCCGCGCCGGGCGCGGCACGC
GTGCGGCTGGCACGCTGGCT

Product: ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MKASTSIHLLLALAAASLAGTASAETIRVAIGTQDTTINCATGGLLIRELKLLDKYLPRTGKYKDVTYDVQWKNFTSGPP
LTNEMVADKLDIGAMADFPGSLNAAAFQKAGKKSLFIAPLSGNAIGTGNGIVVPADSPVQSLAELRGKTISVPFGSTAHG
MLLRAIKRQGWDPDKDVTLVSQSPEVGGSALQAHKVDGHANFVPFPELFVFRGFARKIYDGAQAEAPTFHGALVNAEYAQ
KYPEIVVAYLRAAIEADRLMAAEPEKYSELIARVTGIDAEVDYLFHGPLGLQNRDYTWKPEYRQALQTSIETLKLLKRTD
ADLSADTVIDERYIREAFRLEGLDYEARLKSYDKQPLAAKDAGSGKPIAEPKLAAQLWLRGESRVRAYASPAAAFAALRQ
AAKEGKQARVLYVHDRNTGLKLLASKAWYVQDGKGQASAFLLKGSADGWAKANGGNVRDFAAVSGAAVAVASN

Sequences:

>Translated_473_residues
MKASTSIHLLLALAAASLAGTASAETIRVAIGTQDTTINCATGGLLIRELKLLDKYLPRTGKYKDVTYDVQWKNFTSGPP
LTNEMVADKLDIGAMADFPGSLNAAAFQKAGKKSLFIAPLSGNAIGTGNGIVVPADSPVQSLAELRGKTISVPFGSTAHG
MLLRAIKRQGWDPDKDVTLVSQSPEVGGSALQAHKVDGHANFVPFPELFVFRGFARKIYDGAQAEAPTFHGALVNAEYAQ
KYPEIVVAYLRAAIEADRLMAAEPEKYSELIARVTGIDAEVDYLFHGPLGLQNRDYTWKPEYRQALQTSIETLKLLKRTD
ADLSADTVIDERYIREAFRLEGLDYEARLKSYDKQPLAAKDAGSGKPIAEPKLAAQLWLRGESRVRAYASPAAAFAALRQ
AAKEGKQARVLYVHDRNTGLKLLASKAWYVQDGKGQASAFLLKGSADGWAKANGGNVRDFAAVSGAAVAVASN
>Mature_473_residues
MKASTSIHLLLALAAASLAGTASAETIRVAIGTQDTTINCATGGLLIRELKLLDKYLPRTGKYKDVTYDVQWKNFTSGPP
LTNEMVADKLDIGAMADFPGSLNAAAFQKAGKKSLFIAPLSGNAIGTGNGIVVPADSPVQSLAELRGKTISVPFGSTAHG
MLLRAIKRQGWDPDKDVTLVSQSPEVGGSALQAHKVDGHANFVPFPELFVFRGFARKIYDGAQAEAPTFHGALVNAEYAQ
KYPEIVVAYLRAAIEADRLMAAEPEKYSELIARVTGIDAEVDYLFHGPLGLQNRDYTWKPEYRQALQTSIETLKLLKRTD
ADLSADTVIDERYIREAFRLEGLDYEARLKSYDKQPLAAKDAGSGKPIAEPKLAAQLWLRGESRVRAYASPAAAFAALRQ
AAKEGKQARVLYVHDRNTGLKLLASKAWYVQDGKGQASAFLLKGSADGWAKANGGNVRDFAAVSGAAVAVASN

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=284, Percent_Identity=26.7605633802817, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87081727, Length=231, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 50827; Mature: 50827

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASTSIHLLLALAAASLAGTASAETIRVAIGTQDTTINCATGGLLIRELKLLDKYLPRT
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCC
GKYKDVTYDVQWKNFTSGPPLTNEMVADKLDIGAMADFPGSLNAAAFQKAGKKSLFIAPL
CCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEE
SGNAIGTGNGIVVPADSPVQSLAELRGKTISVPFGSTAHGMLLRAIKRQGWDPDKDVTLV
CCCEEECCCCEEEECCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEE
SQSPEVGGSALQAHKVDGHANFVPFPELFVFRGFARKIYDGAQAEAPTFHGALVNAEYAQ
ECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHH
KYPEIVVAYLRAAIEADRLMAAEPEKYSELIARVTGIDAEVDYLFHGPLGLQNRDYTWKP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCH
EYRQALQTSIETLKLLKRTDADLSADTVIDERYIREAFRLEGLDYEARLKSYDKQPLAAK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
DAGSGKPIAEPKLAAQLWLRGESRVRAYASPAAAFAALRQAAKEGKQARVLYVHDRNTGL
CCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCE
KLLASKAWYVQDGKGQASAFLLKGSADGWAKANGGNVRDFAAVSGAAVAVASN
EEEECCCEEEECCCCCEEEEEEECCCCCCEECCCCCCHHHHHCCCCEEEEECC
>Mature Secondary Structure
MKASTSIHLLLALAAASLAGTASAETIRVAIGTQDTTINCATGGLLIRELKLLDKYLPRT
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCC
GKYKDVTYDVQWKNFTSGPPLTNEMVADKLDIGAMADFPGSLNAAAFQKAGKKSLFIAPL
CCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEE
SGNAIGTGNGIVVPADSPVQSLAELRGKTISVPFGSTAHGMLLRAIKRQGWDPDKDVTLV
CCCEEECCCCEEEECCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEE
SQSPEVGGSALQAHKVDGHANFVPFPELFVFRGFARKIYDGAQAEAPTFHGALVNAEYAQ
ECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHH
KYPEIVVAYLRAAIEADRLMAAEPEKYSELIARVTGIDAEVDYLFHGPLGLQNRDYTWKP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCH
EYRQALQTSIETLKLLKRTDADLSADTVIDERYIREAFRLEGLDYEARLKSYDKQPLAAK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
DAGSGKPIAEPKLAAQLWLRGESRVRAYASPAAAFAALRQAAKEGKQARVLYVHDRNTGL
CCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCE
KLLASKAWYVQDGKGQASAFLLKGSADGWAKANGGNVRDFAAVSGAAVAVASN
EEEECCCEEEECCCCCEEEEEEECCCCCCEECCCCCCHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]