Click here to switch to the map view.

The map label for this gene is puuR [H]

Identifier: 116695951

GI number: 116695951

Start: 2273340

End: 2273930

Strand: Direct

Name: puuR [H]

Synonym: H16_B2015

Alternate gene names: 116695951

Gene position: 2273340-2273930 (Clockwise)

Preceding gene: 116695950

Following gene: 116695956

Centisome position: 78.05

GC content: 66.5

Gene sequence:

>591_bases
ATGGCAAAGACCGAGCAACCCACACCTGAAGCGGCCGACAGCAAGTCGGCCACCCTGACGCTTGGCGTCAAGCTGCGCCA
CGCCCGGCTGGTGGCCGGCTACACGCTGCTGCAGCTCGCCGGAAAGGCGGGTTGCTCGGAAAGCCTGATTTCAAAGATTG
AGCGCGGGCTGGCAACCCCGTCGTTTACCACGCTGCACCGGCTGGCCGTGGCGCTGGACACCAATATCGGCGCGCTGACC
AGCGACGAGGAGCCAAACCAGTCACCGATCCTGCGGCATGGTGAACGCCCGGTGATCCGGGCCGGCGGCGTGGCGCTCGA
ACGCGTGGTGCTGCCCAAGCGTGGCGGCCTGCTGCAGGCCAACATCCACATCGTCTGGCCCGGCGAGGCCAGCGACGGGC
AGATCGAGCACCAGGGCGAGGAAGTTGGCTACGTGCTCGAAGGGCAGCTCGAACTGATGCTCGGCGACGACGTCTACCTG
ATCGGCCCGGGCGATGCTTTCACGTTCTCCAGCCAGGTGCCGCATGGCTACCGCAATGTGGGCGACGTGGTGGCCAGGGT
GCTGTGGGTGAATTCGCCCGCCACCTTCTGA

Upstream 100 bases:

>100_bases
CCAGGCACTGGCTTACACTGTCGCCGAACTGGCCAGCCGCTGAACGCATTGACGTACGGCGCCTGGTGGCCGACCCAAGT
CCAACCAATTCCGAGCCTGC

Downstream 100 bases:

>100_bases
GACGGGAGCGGGCTTGCGCAGGGAAGCCCGTGGCTCGGGTCAGGCCCGCACGAAGGCAGACTTGGCTCAGAGCCCCGACG
GCTTCAATCGTCATCGTGCC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAKTEQPTPEAADSKSATLTLGVKLRHARLVAGYTLLQLAGKAGCSESLISKIERGLATPSFTTLHRLAVALDTNIGALT
SDEEPNQSPILRHGERPVIRAGGVALERVVLPKRGGLLQANIHIVWPGEASDGQIEHQGEEVGYVLEGQLELMLGDDVYL
IGPGDAFTFSSQVPHGYRNVGDVVARVLWVNSPATF

Sequences:

>Translated_196_residues
MAKTEQPTPEAADSKSATLTLGVKLRHARLVAGYTLLQLAGKAGCSESLISKIERGLATPSFTTLHRLAVALDTNIGALT
SDEEPNQSPILRHGERPVIRAGGVALERVVLPKRGGLLQANIHIVWPGEASDGQIEHQGEEVGYVLEGQLELMLGDDVYL
IGPGDAFTFSSQVPHGYRNVGDVVARVLWVNSPATF
>Mature_195_residues
AKTEQPTPEAADSKSATLTLGVKLRHARLVAGYTLLQLAGKAGCSESLISKIERGLATPSFTTLHRLAVALDTNIGALTS
DEEPNQSPILRHGERPVIRAGGVALERVVLPKRGGLLQANIHIVWPGEASDGQIEHQGEEVGYVLEGQLELMLGDDVYLI
GPGDAFTFSSQVPHGYRNVGDVVARVLWVNSPATF

Specific function: Represses puuD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787557, Length=180, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 20926; Mature: 20795

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTEQPTPEAADSKSATLTLGVKLRHARLVAGYTLLQLAGKAGCSESLISKIERGLATP
CCCCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
SFTTLHRLAVALDTNIGALTSDEEPNQSPILRHGERPVIRAGGVALERVVLPKRGGLLQA
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCEEEEEEECCCCCCEEEE
NIHIVWPGEASDGQIEHQGEEVGYVLEGQLELMLGDDVYLIGPGDAFTFSSQVPHGYRNV
EEEEEECCCCCCCCEEECCCEEEEEEECEEEEEECCCEEEECCCCCEEECCCCCCCHHHH
GDVVARVLWVNSPATF
HHHHHHHHEECCCCCC
>Mature Secondary Structure 
AKTEQPTPEAADSKSATLTLGVKLRHARLVAGYTLLQLAGKAGCSESLISKIERGLATP
CCCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
SFTTLHRLAVALDTNIGALTSDEEPNQSPILRHGERPVIRAGGVALERVVLPKRGGLLQA
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCEEEEEEECCCCCCEEEE
NIHIVWPGEASDGQIEHQGEEVGYVLEGQLELMLGDDVYLIGPGDAFTFSSQVPHGYRNV
EEEEEECCCCCCCCEEECCCEEEEEEECEEEEEECCCEEEECCCCCEEECCCCCCCHHHH
GDVVARVLWVNSPATF
HHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553 [H]