| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is arsB [H]
Identifier: 116695902
GI number: 116695902
Start: 2219873
End: 2221126
Strand: Direct
Name: arsB [H]
Synonym: H16_B1966
Alternate gene names: 116695902
Gene position: 2219873-2221126 (Clockwise)
Preceding gene: 116695901
Following gene: 116695903
Centisome position: 76.22
GC content: 72.81
Gene sequence:
>1254_bases ATGTCCAGCCACGCCCCGCTGCTGATCTGGTCGGTCGCCGCGCTGACCACGGCCGGCGTCCTGTTCCGCCCGTTCCGCCT GCCCGAAGCCTTCTGGGCCGCCGCCGGCGCCCTGCTGCTGTGCGTCACCGGCCTGATGACGCTGCCCGACGCGCTGGCGG CGGTGCTGCGCGGCTACGACGTGTACCTGTTTCTCGCGGGCATGATGCTGATCTCCGAGCTGGCCCGCAAGACCGGGCTG TTCGACCACGTCGCCGCGCTCGCCGTGCGCCGGGCGCGCGGTTCGGCGCCGCGGCTGTTCCTGATGGTGTACGGCTTCGG CACGCTGGTGACGGCATTCATGTCCAACGACGCCACCGCCGTGGTGCTGACGCCCGCGGTGCTGGCCGCCACCCGCGCCG CGCGGGTCCGGCATCCGCTGCCCTACTTGTACGCGTGCGCCTTCATCGCCAATGCCGCCAGCTTCGTGCTGCCGATCTCC AACCCGGCCAACCTGGTCATCTTCGGCACACGCATGCCGCCGCTGGCGGGCTGGCTGGCGAGCTTCGCGCTGCCGTCGCT GGCCGCGGTGCTGGCCACGCTGGCAGCGCTGTGGTGGACCCAGCGCGCGGCGCTGGCCGAGCCCATCGAACATGACGTGC CGGTGCCGCCGCTGTCGCCGCAGGCCCGGCTGACCGCGCTGGGCATCGTGCTGACCGGGCTGATCCTGCTGGTGGCCTCG CTGCGCGGCAACGACCTGGGCTGGCCGACCTGCGCGGCGGGCGTGGCCACGCTGCTGCTGGTCTGCGCGACCCGGCGCGA GCTGCTGGTGCCGGCGCTGCGCGAGGTGTCATGGGGGGTGTTGCCGATGGTGGCGGGGCTGTTCGTGCTGGTCGCGGCAC TGGAGCAGACCGTGGTGATCGGCCAGCTGGCCGATGCCGTCGCAGCGGCGTCGCGCGACGGCGGCGCACTGGCCCTGCTG GGCGTGGGCGCGGTGGTGGCGCTGGCGGGCAATATCGCCAACAACCTGCCGGCCGGCCTGATCGCCGCCTCGGCGCTGGC GGGCGGACATGCCTCGCATGCCGTGACCGGTGCCGTGCTGATCGGCATTGACCTTGGCCCCAACTTGTCCGTCACCGGCT CGCTGGCCACGCTGCTGTGGCTCACGGCGCTGCGGCGCGAAGGGCATATGGTCAGCGCCGGCCAGTTCCTGCGCGTGGGG GCCGTGGTGATGCCGGCAGCGATGCTGCCGGCACTGGCGCTTTTGCTGCTTTAG
Upstream 100 bases:
>100_bases CAGCGAGACAACTGGCCTGCCGGCGCCCGGCGCTGCCACGCCGGCCGTCCCCGCGGACGCCAGGCTGTAGACTTCCGGCT TTCCACTGTCCCCGATCCCG
Downstream 100 bases:
>100_bases GCCGCTGGCTCAGCTGGTAGCGGCGTCATTGGCCGCGGGGGTGTTGGCGGCCTGCGGCAGGGGCCGGCGCAGGCCGGTCG CGCCATGGCGCACGGCACTG
Product: anion permease ArsB
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSSHAPLLIWSVAALTTAGVLFRPFRLPEAFWAAAGALLLCVTGLMTLPDALAAVLRGYDVYLFLAGMMLISELARKTGL FDHVAALAVRRARGSAPRLFLMVYGFGTLVTAFMSNDATAVVLTPAVLAATRAARVRHPLPYLYACAFIANAASFVLPIS NPANLVIFGTRMPPLAGWLASFALPSLAAVLATLAALWWTQRAALAEPIEHDVPVPPLSPQARLTALGIVLTGLILLVAS LRGNDLGWPTCAAGVATLLLVCATRRELLVPALREVSWGVLPMVAGLFVLVAALEQTVVIGQLADAVAAASRDGGALALL GVGAVVALAGNIANNLPAGLIAASALAGGHASHAVTGAVLIGIDLGPNLSVTGSLATLLWLTALRREGHMVSAGQFLRVG AVVMPAAMLPALALLLL
Sequences:
>Translated_417_residues MSSHAPLLIWSVAALTTAGVLFRPFRLPEAFWAAAGALLLCVTGLMTLPDALAAVLRGYDVYLFLAGMMLISELARKTGL FDHVAALAVRRARGSAPRLFLMVYGFGTLVTAFMSNDATAVVLTPAVLAATRAARVRHPLPYLYACAFIANAASFVLPIS NPANLVIFGTRMPPLAGWLASFALPSLAAVLATLAALWWTQRAALAEPIEHDVPVPPLSPQARLTALGIVLTGLILLVAS LRGNDLGWPTCAAGVATLLLVCATRRELLVPALREVSWGVLPMVAGLFVLVAALEQTVVIGQLADAVAAASRDGGALALL GVGAVVALAGNIANNLPAGLIAASALAGGHASHAVTGAVLIGIDLGPNLSVTGSLATLLWLTALRREGHMVSAGQFLRVG AVVMPAAMLPALALLLL >Mature_416_residues SSHAPLLIWSVAALTTAGVLFRPFRLPEAFWAAAGALLLCVTGLMTLPDALAAVLRGYDVYLFLAGMMLISELARKTGLF DHVAALAVRRARGSAPRLFLMVYGFGTLVTAFMSNDATAVVLTPAVLAATRAARVRHPLPYLYACAFIANAASFVLPISN PANLVIFGTRMPPLAGWLASFALPSLAAVLATLAALWWTQRAALAEPIEHDVPVPPLSPQARLTALGIVLTGLILLVASL RGNDLGWPTCAAGVATLLLVCATRRELLVPALREVSWGVLPMVAGLFVLVAALEQTVVIGQLADAVAAASRDGGALALLG VGAVVALAGNIANNLPAGLIAASALAGGHASHAVTGAVLIGIDLGPNLSVTGSLATLLWLTALRREGHMVSAGQFLRVGA VVMPAAMLPALALLLL
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=425, Percent_Identity=29.6470588235294, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 42926; Mature: 42794
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHAPLLIWSVAALTTAGVLFRPFRLPEAFWAAAGALLLCVTGLMTLPDALAAVLRGYD CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VYLFLAGMMLISELARKTGLFDHVAALAVRRARGSAPRLFLMVYGFGTLVTAFMSNDATA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCEE VVLTPAVLAATRAARVRHPLPYLYACAFIANAASFVLPISNPANLVIFGTRMPPLAGWLA EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHEEEECCCCCCEEEEECCCCHHHHHHH SFALPSLAAVLATLAALWWTQRAALAEPIEHDVPVPPLSPQARLTALGIVLTGLILLVAS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LRGNDLGWPTCAAGVATLLLVCATRRELLVPALREVSWGVLPMVAGLFVLVAALEQTVVI HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GQLADAVAAASRDGGALALLGVGAVVALAGNIANNLPAGLIAASALAGGHASHAVTGAVL HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHEEEE IGIDLGPNLSVTGSLATLLWLTALRREGHMVSAGQFLRVGAVVMPAAMLPALALLLL EEEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SSHAPLLIWSVAALTTAGVLFRPFRLPEAFWAAAGALLLCVTGLMTLPDALAAVLRGYD CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VYLFLAGMMLISELARKTGLFDHVAALAVRRARGSAPRLFLMVYGFGTLVTAFMSNDATA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCEE VVLTPAVLAATRAARVRHPLPYLYACAFIANAASFVLPISNPANLVIFGTRMPPLAGWLA EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHEEEECCCCCCEEEEECCCCHHHHHHH SFALPSLAAVLATLAALWWTQRAALAEPIEHDVPVPPLSPQARLTALGIVLTGLILLVAS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LRGNDLGWPTCAAGVATLLLVCATRRELLVPALREVSWGVLPMVAGLFVLVAALEQTVVI HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GQLADAVAAASRDGGALALLGVGAVVALAGNIANNLPAGLIAASALAGGHASHAVTGAVL HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHEEEE IGIDLGPNLSVTGSLATLLWLTALRREGHMVSAGQFLRVGAVVMPAAMLPALALLLL EEEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA