Definition Ralstonia eutropha H16 chromosome 2, complete sequence.
Accession NC_008314
Length 2,912,490

Click here to switch to the map view.

The map label for this gene is 116695900

Identifier: 116695900

GI number: 116695900

Start: 2216783

End: 2217700

Strand: Direct

Name: 116695900

Synonym: H16_B1964

Alternate gene names: NA

Gene position: 2216783-2217700 (Clockwise)

Preceding gene: 116695897

Following gene: 116695901

Centisome position: 76.11

GC content: 67.97

Gene sequence:

>918_bases
ATGCCATTGATCACCCGCCGTACGCTGGCAGCCGCGCTGATGACTGCCAGCGGCTTCGCCTGCTACTGGACCTACCTGAC
GCTCAACCAGGAACGGCTGCTGTTCGATGCACGCCGGCGTCCGCCGCGCGACCTGCCCGACGGCATCATTGGCTACTCGC
ACCTGATCCCCGGCGGCGTGGTGCGCGGCTACATCTACCATAGCCCCGGCGACAACGTGCGCGACCTGCTGTTCTACCTG
CCCGGGCGTGGCGAGGATGTGCTCGAAACGCTGCAGTACGCGCGCTGGCTGCCCGCCGGCATGGCCTTCGCCACCTATGA
CTACCGCGGCCTGGGACACTCCGACGGCCTGCCGTCCGAGGGCGCCGCAGTGGCCGACGCCAGCCAGTTCCTGCTGCATG
CGCGGCGTGTCTTCCCCGACACCCGGGTGCATGTGGTGGGCCGCAGCCTGGGCACCGGCGTCGCGATCCAGCTGGCGGAT
CTGCAGGACTTCGACAGCCTGCAGCTGATCACGCCCTACGACTCGCTGCTTGAACTGGTGCGCAAGCGCTTCCCGCTGGT
GCCGCTGCGCCAGCTGATGCGCCACCATTTCGATTCGATCTCGCATTGCAAGAAGGTCGTGCAGAGCACCAAGGTGCTGC
TGGCCGAGACCGATGAAGTGGTGCCGCATGAATGCTCGGAACGGCTCATGGCTGCCTGGCCCGGCCCGGTGGCGTTGCAG
ACCGTGCCAGCCACGAATCACTTCACCATTATCGAACGCGAGGAAACCTGGCTGGCGCTGTGCGAATTTGCCCGGCATCA
CGGCCAGGCCAGGCTGCGCGTGGCTACAGCCCAGCCCGCACCGCCGGCCGCCACCGGCACGCCGCCCATCGACCATGACG
AGCTCGGCAACCCGCTGCCGCTGGCGGCCGGCCGCTAG

Upstream 100 bases:

>100_bases
GCTGCGCGCTCGCGCCTGACAAAAATGAGGTAGGCTGCGCGGCTGGGCGGCAAGGCCGGCGCTGGTGCGCCCCGCCTGGC
AGCGACACTGAAGACTAGCC

Downstream 100 bases:

>100_bases
CGCCAGTCAGGCAGCGGGTAAAATGCGCGCATGAAAAAAATCGCAGTCAAGGCAGGCGGCGCCGTACTGGCGCTGGCTGC
AGCCGGTGCCTTGCTTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MPLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGVVRGYIYHSPGDNVRDLLFYL
PGRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSEGAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLAD
LQDFDSLQLITPYDSLLELVRKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQ
TVPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLPLAAGR

Sequences:

>Translated_305_residues
MPLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGVVRGYIYHSPGDNVRDLLFYL
PGRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSEGAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLAD
LQDFDSLQLITPYDSLLELVRKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQ
TVPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLPLAAGR
>Mature_304_residues
PLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGVVRGYIYHSPGDNVRDLLFYLP
GRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSEGAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLADL
QDFDSLQLITPYDSLLELVRKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQT
VPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLPLAAGR

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.pombe bem46 and yeast YNL320w [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 33851; Mature: 33720

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGV
CCCCHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHH
VRGYIYHSPGDNVRDLLFYLPGRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSE
HEEEEEECCCCCHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
GAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLADLQDFDSLQLITPYDSLLELV
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCHHHHHHHH
RKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQ
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEE
TVPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLP
EECCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCC
LAAGR
CCCCC
>Mature Secondary Structure 
PLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGV
CCCHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHH
VRGYIYHSPGDNVRDLLFYLPGRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSE
HEEEEEECCCCCHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
GAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLADLQDFDSLQLITPYDSLLELV
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCHHHHHHHH
RKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQ
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEE
TVPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLP
EECCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCC
LAAGR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]