| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695747
Identifier: 116695747
GI number: 116695747
Start: 2047701
End: 2048489
Strand: Direct
Name: 116695747
Synonym: H16_B1811
Alternate gene names: NA
Gene position: 2047701-2048489 (Clockwise)
Preceding gene: 116695746
Following gene: 116695748
Centisome position: 70.31
GC content: 67.55
Gene sequence:
>789_bases ATGAGCCATTGGCAAGCAGATGCTGCTTCGCGCCCGCCGGTGCTGATCTCGTTGACAGCCTATGGCGCCGACTTCGCCCT GCGCGACGGACAGGCCGCACTCGCGCGGATTGCCGCGGCAGCCGGCGCGGACGGCGTGGAATTTCGCGGCGAACTCCAGC GCGGGCACAAGGATGAAGTCATTGAACAGCGCGAGGTCGCCCGGCAGCATGGGCTGAGCGTAGTCTGGTCCAGCCCGGAA GGCCTCTGGAGCGAAGCCGGCAGCCTCGATGCCGCCGCTCTCGACCGTGCCTTCACGACCGCGCTGGCGCTCGGTGCGAC CCGGGTCAAGATGTCGCTTGGCGGCTATCGGGAAGGCACGGCACTGGAAGCACTGCTTCCCTGGCTGCGGCACGATGGCA TCGAACTCGTCGTGGAAAACGACCAGACCGCCCAGGCCGGCACCGTGCCGCCGTTGCGCGATTTCTTCGCGCGTATCACG GCGCTCGGCGAGAACGTGCCGATGACCTTCGACATGGGCAACTGGCACTGGACCGGCGAAGACCCGCTCGACGCCGCGCA GGTCTTCGGCGCCGGCGTCGGCTACGTGCACTGCAAAGGCGTGCAGCGCACGCCTGCCAAATGGATCGCGGTGCCGCTTG ATCAGTCGGCGGCACCCTGGCGCAGCGTCTTGCGCCGCCTGCCCACGCACGTTGCGCGTGCGATCGAATTCCCGCTGCAA GGCGAAGACCTGGTGCAGGTCACGCGCCATCATGTCGAACTGCTGCGTTCGGTGGAGGTCCCCGCATGA
Upstream 100 bases:
>100_bases TGCACCAGGGCAAGGTCCACGAGGCGGGGCCATCGAAGGCGCTGTTCGCGCAGCCGCGGACACCGGAACTGCAGCAATTC CTCGGCGCGGGAGCACTGAA
Downstream 100 bases:
>100_bases GCACCGATCTTGACGTGGTCACGCTGGGCGAGGCGATGCTGATGCTGGTCGCCGGCGAAGCCGGGCCGCTCGAAGGCGCG CAGACCTTCCACAAGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Epimerase; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Epimerase KguE; Sugar Isomerase; Sugar Phosphatase Isomerase/Epimerase; Sugar Isomerase/Epimerase; Sugar Phosphate Isomerases/Epimerase; Epimerase KguE-Like; Sugar Or Sugar Phosphate Isomerase
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSHWQADAASRPPVLISLTAYGADFALRDGQAALARIAAAAGADGVEFRGELQRGHKDEVIEQREVARQHGLSVVWSSPE GLWSEAGSLDAAALDRAFTTALALGATRVKMSLGGYREGTALEALLPWLRHDGIELVVENDQTAQAGTVPPLRDFFARIT ALGENVPMTFDMGNWHWTGEDPLDAAQVFGAGVGYVHCKGVQRTPAKWIAVPLDQSAAPWRSVLRRLPTHVARAIEFPLQ GEDLVQVTRHHVELLRSVEVPA
Sequences:
>Translated_262_residues MSHWQADAASRPPVLISLTAYGADFALRDGQAALARIAAAAGADGVEFRGELQRGHKDEVIEQREVARQHGLSVVWSSPE GLWSEAGSLDAAALDRAFTTALALGATRVKMSLGGYREGTALEALLPWLRHDGIELVVENDQTAQAGTVPPLRDFFARIT ALGENVPMTFDMGNWHWTGEDPLDAAQVFGAGVGYVHCKGVQRTPAKWIAVPLDQSAAPWRSVLRRLPTHVARAIEFPLQ GEDLVQVTRHHVELLRSVEVPA >Mature_261_residues SHWQADAASRPPVLISLTAYGADFALRDGQAALARIAAAAGADGVEFRGELQRGHKDEVIEQREVARQHGLSVVWSSPEG LWSEAGSLDAAALDRAFTTALALGATRVKMSLGGYREGTALEALLPWLRHDGIELVVENDQTAQAGTVPPLRDFFARITA LGENVPMTFDMGNWHWTGEDPLDAAQVFGAGVGYVHCKGVQRTPAKWIAVPLDQSAAPWRSVLRRLPTHVARAIEFPLQG EDLVQVTRHHVELLRSVEVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28405; Mature: 28274
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHWQADAASRPPVLISLTAYGADFALRDGQAALARIAAAAGADGVEFRGELQRGHKDEV CCCCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH IEQREVARQHGLSVVWSSPEGLWSEAGSLDAAALDRAFTTALALGATRVKMSLGGYREGT HHHHHHHHHCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCH ALEALLPWLRHDGIELVVENDQTAQAGTVPPLRDFFARITALGENVPMTFDMGNWHWTGE HHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCC DPLDAAQVFGAGVGYVHCKGVQRTPAKWIAVPLDQSAAPWRSVLRRLPTHVARAIEFPLQ CCHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC GEDLVQVTRHHVELLRSVEVPA CHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SHWQADAASRPPVLISLTAYGADFALRDGQAALARIAAAAGADGVEFRGELQRGHKDEV CCCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH IEQREVARQHGLSVVWSSPEGLWSEAGSLDAAALDRAFTTALALGATRVKMSLGGYREGT HHHHHHHHHCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCH ALEALLPWLRHDGIELVVENDQTAQAGTVPPLRDFFARITALGENVPMTFDMGNWHWTGE HHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCC DPLDAAQVFGAGVGYVHCKGVQRTPAKWIAVPLDQSAAPWRSVLRRLPTHVARAIEFPLQ CCHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC GEDLVQVTRHHVELLRSVEVPA CHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA