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The map label for this gene is yfdE [H]

Identifier: 116695684

GI number: 116695684

Start: 1985788

End: 1987041

Strand: Direct

Name: yfdE [H]

Synonym: H16_B1748

Alternate gene names: 116695684

Gene position: 1985788-1987041 (Clockwise)

Preceding gene: 116695683

Following gene: 116695685

Centisome position: 68.18

GC content: 65.71

Gene sequence:

>1254_bases
ATGACAACCGAAAACGGGGACAAGGCACCCGGCCCGTGCGCAGGATTGCGCGTGCTGGAATTCGCAACCATGGTTGCCGG
GCCGTTCGCCGGCCAGATGCTGGCCGATCTCGGGGCCGAGGTCATCAAGATCGAGCCCATCAGTGGCGATCCCATGCGCA
AGGGGCACCCCCAGCACCAGGGGGTCGCGGCTGGATTCGCGCTGTTCAACGGTGGCAAGCGAAGCATGTGCATCGACCTC
AAGTCCCCTTCGGGACAAGCGCTGGCGCGCGAGCTGGCGTTGACTGCCGATGTGCTGATTGAGAACTTCCGCCCGGGCGT
GATGGACGGATTCAGGCTCGGGCATGAGACCCTTTGCCAGGCCAATGCAAGGCTCATCTATGCGTCAATCAATGGCTTCG
GCGTCGATGGACCGTATGCCGCACGGCCCGCATACGATCATGTCGTGCAGGCGCTGAGCGGGACCATGCCGGGCATCGGC
AGCCAGGACCAGCCCGAGCCCGTCCGCAATTCGGTCGTCGACAAGATTACCGCTGCCACCGCCGCACAAGCAATTCTGGC
CGCGCTCGTCCACCGCGAGCGCAACGGCGGCAAGGGCCAGCGGGTCTGCGTGTCGCTGCTGGACGCCTACGCCGCCTTCA
TGCTGCCGGATCTGATGGTGAACCACTACTTCCAGACGCCAAGTATCGGTGCGCGCGCCCTGCCCAACACCTACTTCCCA
ATCCGGACGTCGGACGGCCACGTCATGGGCCATATCTTCACCGACGAGCAGTTCAGGAATCTCTGCCGGATGTTTGACCG
CCTGGACCTGATCGACGATCCCCGCTTCGCTGGTGTGAAGGAGCGCCGCGATCACTGTGAGGCGATGTGGGATGAAATCC
GGCACAGCGCGCGGCGGCTCGACACGGCCACCGTCGAGCAGCTTGCCGAGAAGCACAGCGTCCCGCTTGGGCGCGTCAAC
GACCTGGCCGGGTTCTTCGCCGATCCGCAGGTCCGGCACAACGGCACGTACTCGGACGATGACGATCCATTGCTCGGAAG
AGTGCGTCAGCTTCGGTCCCCGATCCGCCTGGCGCTGACGCCAGCGGCCAGCCGCCGCCGGCCGCCCCTGCTCGGGGAGG
ACACCAGCGCACTCCTCGCGGGCCTGGGCAAGACGGCAACGCAGATCAACCAGGCCTTTGCAAGCCGGGTGGTCGCCGGC
CGCATGGACGAGGCGGATGCCGCAGGCAAGTCCGCGGTGGGAGCACAAGCATGA

Upstream 100 bases:

>100_bases
ATGCCGGACGCATGGCGGGTGTGCTGATGTAGGGAACCCGACGGCGGCGGGCGTCTTTCACGCAACACCGCCTGGGTGTA
CAGAAACTTCGGGGAACAAT

Downstream 100 bases:

>100_bases
GCGGTCCATTGAAAGGCGTCAGGATCATCGAGTTCGGCGCAATCGGGCCGGCGCCATTCGCCTGCATGATGCTGGCCGAC
AACGGCGCGGACGTCATCCG

Product: acyl-CoA transferase/carnitine dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTTENGDKAPGPCAGLRVLEFATMVAGPFAGQMLADLGAEVIKIEPISGDPMRKGHPQHQGVAAGFALFNGGKRSMCIDL
KSPSGQALARELALTADVLIENFRPGVMDGFRLGHETLCQANARLIYASINGFGVDGPYAARPAYDHVVQALSGTMPGIG
SQDQPEPVRNSVVDKITAATAAQAILAALVHRERNGGKGQRVCVSLLDAYAAFMLPDLMVNHYFQTPSIGARALPNTYFP
IRTSDGHVMGHIFTDEQFRNLCRMFDRLDLIDDPRFAGVKERRDHCEAMWDEIRHSARRLDTATVEQLAEKHSVPLGRVN
DLAGFFADPQVRHNGTYSDDDDPLLGRVRQLRSPIRLALTPAASRRRPPLLGEDTSALLAGLGKTATQINQAFASRVVAG
RMDEADAAGKSAVGAQA

Sequences:

>Translated_417_residues
MTTENGDKAPGPCAGLRVLEFATMVAGPFAGQMLADLGAEVIKIEPISGDPMRKGHPQHQGVAAGFALFNGGKRSMCIDL
KSPSGQALARELALTADVLIENFRPGVMDGFRLGHETLCQANARLIYASINGFGVDGPYAARPAYDHVVQALSGTMPGIG
SQDQPEPVRNSVVDKITAATAAQAILAALVHRERNGGKGQRVCVSLLDAYAAFMLPDLMVNHYFQTPSIGARALPNTYFP
IRTSDGHVMGHIFTDEQFRNLCRMFDRLDLIDDPRFAGVKERRDHCEAMWDEIRHSARRLDTATVEQLAEKHSVPLGRVN
DLAGFFADPQVRHNGTYSDDDDPLLGRVRQLRSPIRLALTPAASRRRPPLLGEDTSALLAGLGKTATQINQAFASRVVAG
RMDEADAAGKSAVGAQA
>Mature_416_residues
TTENGDKAPGPCAGLRVLEFATMVAGPFAGQMLADLGAEVIKIEPISGDPMRKGHPQHQGVAAGFALFNGGKRSMCIDLK
SPSGQALARELALTADVLIENFRPGVMDGFRLGHETLCQANARLIYASINGFGVDGPYAARPAYDHVVQALSGTMPGIGS
QDQPEPVRNSVVDKITAATAAQAILAALVHRERNGGKGQRVCVSLLDAYAAFMLPDLMVNHYFQTPSIGARALPNTYFPI
RTSDGHVMGHIFTDEQFRNLCRMFDRLDLIDDPRFAGVKERRDHCEAMWDEIRHSARRLDTATVEQLAEKHSVPLGRVND
LAGFFADPQVRHNGTYSDDDDPLLGRVRQLRSPIRLALTPAASRRRPPLLGEDTSALLAGLGKTATQINQAFASRVVAGR
MDEADAAGKSAVGAQA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=376, Percent_Identity=31.6489361702128, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI300863124, Length=402, Percent_Identity=29.6019900497512, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI300863126, Length=370, Percent_Identity=28.9189189189189, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI13376042, Length=402, Percent_Identity=26.6169154228856, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI266456254, Length=415, Percent_Identity=27.4698795180723, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI42794625, Length=404, Percent_Identity=27.4752475247525, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI266458397, Length=254, Percent_Identity=33.0708661417323, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI266458393, Length=254, Percent_Identity=33.0708661417323, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI42822893, Length=171, Percent_Identity=33.9181286549708, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI266458395, Length=171, Percent_Identity=33.9181286549708, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI87082093, Length=317, Percent_Identity=34.7003154574132, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1788717, Length=407, Percent_Identity=29.2383292383292, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1786222, Length=201, Percent_Identity=31.8407960199005, Blast_Score=87, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI32564160, Length=219, Percent_Identity=31.5068493150685, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI115535051, Length=270, Percent_Identity=27.4074074074074, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24648431, Length=382, Percent_Identity=32.9842931937173, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24585488, Length=271, Percent_Identity=34.6863468634686, Blast_Score=133, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 44916; Mature: 44784

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTENGDKAPGPCAGLRVLEFATMVAGPFAGQMLADLGAEVIKIEPISGDPMRKGHPQHQ
CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
GVAAGFALFNGGKRSMCIDLKSPSGQALARELALTADVLIENFRPGVMDGFRLGHETLCQ
CHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHH
ANARLIYASINGFGVDGPYAARPAYDHVVQALSGTMPGIGSQDQPEPVRNSVVDKITAAT
CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
AAQAILAALVHRERNGGKGQRVCVSLLDAYAAFMLPDLMVNHYFQTPSIGARALPNTYFP
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
IRTSDGHVMGHIFTDEQFRNLCRMFDRLDLIDDPRFAGVKERRDHCEAMWDEIRHSARRL
EECCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DTATVEQLAEKHSVPLGRVNDLAGFFADPQVRHNGTYSDDDDPLLGRVRQLRSPIRLALT
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEC
PAASRRRPPLLGEDTSALLAGLGKTATQINQAFASRVVAGRMDEADAAGKSAVGAQA
CCHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTENGDKAPGPCAGLRVLEFATMVAGPFAGQMLADLGAEVIKIEPISGDPMRKGHPQHQ
CCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
GVAAGFALFNGGKRSMCIDLKSPSGQALARELALTADVLIENFRPGVMDGFRLGHETLCQ
CHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHH
ANARLIYASINGFGVDGPYAARPAYDHVVQALSGTMPGIGSQDQPEPVRNSVVDKITAAT
CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
AAQAILAALVHRERNGGKGQRVCVSLLDAYAAFMLPDLMVNHYFQTPSIGARALPNTYFP
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
IRTSDGHVMGHIFTDEQFRNLCRMFDRLDLIDDPRFAGVKERRDHCEAMWDEIRHSARRL
EECCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DTATVEQLAEKHSVPLGRVNDLAGFFADPQVRHNGTYSDDDDPLLGRVRQLRSPIRLALT
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEC
PAASRRRPPLLGEDTSALLAGLGKTATQINQAFASRVVAGRMDEADAAGKSAVGAQA
CCHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]