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The map label for this gene is ycbL [C]

Identifier: 116695529

GI number: 116695529

Start: 1789849

End: 1791546

Strand: Direct

Name: ycbL [C]

Synonym: H16_B1588

Alternate gene names: 116695529

Gene position: 1789849-1791546 (Clockwise)

Preceding gene: 116695522

Following gene: 116695531

Centisome position: 61.45

GC content: 70.49

Gene sequence:

>1698_bases
ATGACAACCACAGAGACAAGCGGCAACCGCCCTGCCACCCCTGCTCCCCTGCTGCGCACCGCCGCCAGCCTGCTCGTCGT
GCGCGATGCGCCGGCCGGCATGGAAGTGCTGCTGGTACGCCGCGTCGAACGCGCCAACGACCGCAGCAGCGGCGCCTACG
TTTTCCCGGGCGGCACGCTCGACGCGCAGGACAAGGCCCTGCACGCGCATGCCCACGGCCTGGACGACGCCCTTGCCAGC
GAACGCCTGGGCATGCCGGCCAGCGGCCTGGACTTCTACCTGGCCGCCTTGCGAGAATGCTATGAAGAGGCCGGCCTGCT
GTTTGCCTGTGACCGCGACGGGCGCCCGCATTCGCCGCACCAGCTCGACGCCGCCGGCCAGGCGCTGCTGCGCGAGGCAG
TGCAGCGCGGCGGCCCCGGCCTGGCCCACGCTTGCGAGCAACTGGGCCTGCGCCTGGCGGCCGACCGGCTCGCCTATCAC
AGCTACTGGCTGACGCCCCCCGGCCTGCCCAAGCGTTTCGATACCCGCTTCTTTGTCGCCATCGCCCCCGAAGGCCAGGT
GGCCGTGCCCGACGGCACCGAGATCGTGGAGCACCGCTGGATTCGCCCCGGCGAGGCCGCCGATCCCGCCAGCGGCCTGC
CGCTGATGCACGTCACGCGCCGCACGCTGAGCTCGATCGCGCAGTTTGAAAGCGCCGCGGCCTGCTTCGCTTATTACTCG
CAGCTGCGCGGCATTGCCTGCATCATGCCGCGGCTGGCCACCGGCGCGGCCGGCGTGCGCCCGGTGATGCCGAACGAGCC
GTGCTACGCCGAGATCGGCCGCATCGATCCCGACGGCAACACGCACGGCCGTTATGAGCTGGTACCGGGCGTGCCGGTAC
GACTGTCCGAGCGCGTCTGGCGCGTGACCGCCAACAACGGCAACGTGATGACGGGCCCGGGCACCAACACCTACCTGATA
GGCGGCGGCGCGCGCAATGAATGGGCCGTGATCGATCCGGGCCCGGACGATGGCGAGCATGTGCGCGCCATCCTTGCTGC
CGCACCCGGCCCGATCCGCTGGATCCTCGCCACGCATACCCACCTGGACCATTCGCCCGCTGCCGCCGCGCTGCAGGCCG
CCACCGGCGCCACGGTGCTCGGGCGTGCCGCGCCTGCCGGCCAGTGGCAGGACCTCAGCTTCGAGCCACAGCGCGAACTG
AACCACGGCGAGCGCCTTGCCATCACCGAGGACTGCACCTTGCGCGTGTGCCACACGCCGGGCCACGCCTCGAACCACCT
CTGCTACCTGCTGGAAGAAGAACAGACACTCTTTACCGGCGACCACGTGATGCAGGGCTCGACCGTCGTCATCGGCCCGC
CCGATGGCGACATGCGCGCCTACCTGGACTCGCTCGCAGCACTGCAGGATGAAGACCTCGACTGGCTGGCGCCGGGCCAT
GGCTTCCTGATCGCGCGCCCGCAGGACGCCATCCGCATCCTGGTCCGGCACCGGCTGCAGCGCGAGGCCAAGGTCGTTGC
CGCACTGCGCGAACTGAGCCCGGCACCGATCGGCGAGCTGCTGCTGCGCGTCTACGACGATGTGCCGCCGCGCATGCATC
CGGTTGCGCAGCGATCGCTGCTGGCGCACCTGCTCAAGCTGCGCGATGACGGCAAGGCGCAGGAAGCGGACGGCATCTGG
TCGAACGCCACGGCGTAG

Upstream 100 bases:

>100_bases
GCCGATAGCGAATCCTTGAACGCGGCTAAACTATGGCACGCGGCAGCGCCCCGGGTTCCGGCCAGGTGCGTGCCGCCAGC
ACAACCACGATGCCGACACA

Downstream 100 bases:

>100_bases
CACCGGCGCGGGCATCGGGGCCAGTTGAAGATTTTTGGCGGGGGGCTTGCGCAAACCAGAAATTGCGCTACAATGGCGCC
TCTCGTGTGCGGCTGTAGCT

Product: zinc-dependent hydrolase

Products: NA

Alternate protein names: NUDIX Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase-Like; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Family Protein; Beta-Lactamase-Like Protein; Beta-Lactamase; NUDIX Family Protein; Zn-Dependent Hydrolase Glyoxylase; NUDIX Family Hydrolase; Hydroxyacylglutathione Hydrolase; Metallo-Beta-Lactamase Family Hydrolase; Nudix Hydrolase; Metallo-Beta-Lactamase Domain Protein; Hydrolase Protein; Zinc-Dependent Hydrolase; Hydrolase/Glyoxylase; Zn-Dependent Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like; Nudix Superfamily Hydrolase; Beta-Lactamase-Like Hydrolase

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MTTTETSGNRPATPAPLLRTAASLLVVRDAPAGMEVLLVRRVERANDRSSGAYVFPGGTLDAQDKALHAHAHGLDDALAS
ERLGMPASGLDFYLAALRECYEEAGLLFACDRDGRPHSPHQLDAAGQALLREAVQRGGPGLAHACEQLGLRLAADRLAYH
SYWLTPPGLPKRFDTRFFVAIAPEGQVAVPDGTEIVEHRWIRPGEAADPASGLPLMHVTRRTLSSIAQFESAAACFAYYS
QLRGIACIMPRLATGAAGVRPVMPNEPCYAEIGRIDPDGNTHGRYELVPGVPVRLSERVWRVTANNGNVMTGPGTNTYLI
GGGARNEWAVIDPGPDDGEHVRAILAAAPGPIRWILATHTHLDHSPAAAALQAATGATVLGRAAPAGQWQDLSFEPQREL
NHGERLAITEDCTLRVCHTPGHASNHLCYLLEEEQTLFTGDHVMQGSTVVIGPPDGDMRAYLDSLAALQDEDLDWLAPGH
GFLIARPQDAIRILVRHRLQREAKVVAALRELSPAPIGELLLRVYDDVPPRMHPVAQRSLLAHLLKLRDDGKAQEADGIW
SNATA

Sequences:

>Translated_565_residues
MTTTETSGNRPATPAPLLRTAASLLVVRDAPAGMEVLLVRRVERANDRSSGAYVFPGGTLDAQDKALHAHAHGLDDALAS
ERLGMPASGLDFYLAALRECYEEAGLLFACDRDGRPHSPHQLDAAGQALLREAVQRGGPGLAHACEQLGLRLAADRLAYH
SYWLTPPGLPKRFDTRFFVAIAPEGQVAVPDGTEIVEHRWIRPGEAADPASGLPLMHVTRRTLSSIAQFESAAACFAYYS
QLRGIACIMPRLATGAAGVRPVMPNEPCYAEIGRIDPDGNTHGRYELVPGVPVRLSERVWRVTANNGNVMTGPGTNTYLI
GGGARNEWAVIDPGPDDGEHVRAILAAAPGPIRWILATHTHLDHSPAAAALQAATGATVLGRAAPAGQWQDLSFEPQREL
NHGERLAITEDCTLRVCHTPGHASNHLCYLLEEEQTLFTGDHVMQGSTVVIGPPDGDMRAYLDSLAALQDEDLDWLAPGH
GFLIARPQDAIRILVRHRLQREAKVVAALRELSPAPIGELLLRVYDDVPPRMHPVAQRSLLAHLLKLRDDGKAQEADGIW
SNATA
>Mature_564_residues
TTTETSGNRPATPAPLLRTAASLLVVRDAPAGMEVLLVRRVERANDRSSGAYVFPGGTLDAQDKALHAHAHGLDDALASE
RLGMPASGLDFYLAALRECYEEAGLLFACDRDGRPHSPHQLDAAGQALLREAVQRGGPGLAHACEQLGLRLAADRLAYHS
YWLTPPGLPKRFDTRFFVAIAPEGQVAVPDGTEIVEHRWIRPGEAADPASGLPLMHVTRRTLSSIAQFESAAACFAYYSQ
LRGIACIMPRLATGAAGVRPVMPNEPCYAEIGRIDPDGNTHGRYELVPGVPVRLSERVWRVTANNGNVMTGPGTNTYLIG
GGARNEWAVIDPGPDDGEHVRAILAAAPGPIRWILATHTHLDHSPAAAALQAATGATVLGRAAPAGQWQDLSFEPQRELN
HGERLAITEDCTLRVCHTPGHASNHLCYLLEEEQTLFTGDHVMQGSTVVIGPPDGDMRAYLDSLAALQDEDLDWLAPGHG
FLIARPQDAIRILVRHRLQREAKVVAALRELSPAPIGELLLRVYDDVPPRMHPVAQRSLLAHLLKLRDDGKAQEADGIWS
NATA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7705793, Length=263, Percent_Identity=32.6996197718631, Blast_Score=113, Evalue=5e-25,
Organism=Escherichia coli, GI1787158, Length=171, Percent_Identity=30.9941520467836, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193205216, Length=269, Percent_Identity=28.6245353159851, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17537503, Length=269, Percent_Identity=28.6245353159851, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI20129357, Length=282, Percent_Identity=31.2056737588652, Blast_Score=111, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60944; Mature: 60813

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTETSGNRPATPAPLLRTAASLLVVRDAPAGMEVLLVRRVERANDRSSGAYVFPGGTL
CCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC
DAQDKALHAHAHGLDDALASERLGMPASGLDFYLAALRECYEEAGLLFACDRDGRPHSPH
CCCCHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
QLDAAGQALLREAVQRGGPGLAHACEQLGLRLAADRLAYHSYWLTPPGLPKRFDTRFFVA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEE
IAPEGQVAVPDGTEIVEHRWIRPGEAADPASGLPLMHVTRRTLSSIAQFESAAACFAYYS
ECCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QLRGIACIMPRLATGAAGVRPVMPNEPCYAEIGRIDPDGNTHGRYELVPGVPVRLSERVW
HHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCEECCEEE
RVTANNGNVMTGPGTNTYLIGGGARNEWAVIDPGPDDGEHVRAILAAAPGPIRWILATHT
EEECCCCCEEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEEEECC
HLDHSPAAAALQAATGATVLGRAAPAGQWQDLSFEPQRELNHGERLAITEDCTLRVCHTP
CCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEEECC
GHASNHLCYLLEEEQTLFTGDHVMQGSTVVIGPPDGDMRAYLDSLAALQDEDLDWLAPGH
CCCCCCEEEEEECCCEEEECCEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCC
GFLIARPQDAIRILVRHRLQREAKVVAALRELSPAPIGELLLRVYDDVPPRMHPVAQRSL
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
LAHLLKLRDDGKAQEADGIWSNATA
HHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTTETSGNRPATPAPLLRTAASLLVVRDAPAGMEVLLVRRVERANDRSSGAYVFPGGTL
CCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC
DAQDKALHAHAHGLDDALASERLGMPASGLDFYLAALRECYEEAGLLFACDRDGRPHSPH
CCCCHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
QLDAAGQALLREAVQRGGPGLAHACEQLGLRLAADRLAYHSYWLTPPGLPKRFDTRFFVA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEE
IAPEGQVAVPDGTEIVEHRWIRPGEAADPASGLPLMHVTRRTLSSIAQFESAAACFAYYS
ECCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QLRGIACIMPRLATGAAGVRPVMPNEPCYAEIGRIDPDGNTHGRYELVPGVPVRLSERVW
HHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCEECCEEE
RVTANNGNVMTGPGTNTYLIGGGARNEWAVIDPGPDDGEHVRAILAAAPGPIRWILATHT
EEECCCCCEEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEEEECC
HLDHSPAAAALQAATGATVLGRAAPAGQWQDLSFEPQRELNHGERLAITEDCTLRVCHTP
CCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEEECC
GHASNHLCYLLEEEQTLFTGDHVMQGSTVVIGPPDGDMRAYLDSLAALQDEDLDWLAPGH
CCCCCCEEEEEECCCEEEECCEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCC
GFLIARPQDAIRILVRHRLQREAKVVAALRELSPAPIGELLLRVYDDVPPRMHPVAQRSL
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
LAHLLKLRDDGKAQEADGIWSNATA
HHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA