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The map label for this gene is yhjX [H]

Identifier: 116695402

GI number: 116695402

Start: 1636683

End: 1638113

Strand: Direct

Name: yhjX [H]

Synonym: H16_B1460

Alternate gene names: 116695402

Gene position: 1636683-1638113 (Clockwise)

Preceding gene: 116695399

Following gene: 116695403

Centisome position: 56.2

GC content: 67.51

Gene sequence:

>1431_bases
ATGTCATACCCCGCGCAAGCGCAAACGCCCTCGCAGAAGTCCCAGCACGCGTCGCCGTCCCGGCCAGCATCACGCCCGTC
GGCCTTCTCCAAGGAGGCCATCATCGCCCGCCCCGGCTTCAACCGCTGGATGGTGCCGCCGGCCGCGCTGGCGGTGCACC
TGTGCATTGGCCAGGCCTATGCCTTCTCGGTCTTCAACGAGCCGCTGACGCGGATCCTCGGCGTCACGCAGTCCGCGCCG
GGCGACTGGCAACTGACCACGCTGGGCTGGGTGTTCTCGCTGGCGATCTTCTTCCTCGGCATCTCTGCCGCCTTTGCCGG
CAAGTGGCTGGAGAAGGTCGGGCCGCGGCGCACCATGTTCACGGCCGCGTGCTGCTTCGGCGGCGGCTTCCTGGTTTCGG
CGCTGGGCATCTGGCTGCACCAGATCTGGCTGCTGTACCTGGGCTACGGCGTGCTGGGCGGGATCGGGCTGGGGCTGGGC
TACGTGTCGCCGGTGTCCACGCTGATCCGCTGGTTTCCCGACCGCCGCGGCATGGCCACCGGCATGGCGATCATGGGCTT
CGGCGGCGGCGCGATGATCGGCGCGCCGCTATCGGTCGCGCTGATGAACTACTTCAAGAGCGCGACCAGCGCGGGCGTGG
CTCAGACCTTCCTGGTGATGGGCGTGATCTACTTCATCTCGATGTCGATCGGGGCGCTGGCCATCCGCATCCCGGCCCCG
GGCTGGGCGCCCCCGGGCTACGTACCCACCACCAAGGCCCGCAAGATGGTCACGCACGCCAACGTGCACATCGACCAGGC
GCTGAAGACGCCGCAATTCTACCTGCTGTGGGTGATCCTGTTCCTGAACATCACCGCCGGCATCGGCGTGCTGGGCCAGG
CTGCGGTGATGATCCAGGAAACCTTCAAGGGCAGCATCACTGCGGCAGCCGCCGCCGGCTTCGTCGGCCTGCTCAGCATC
GGCAACATGACGGGGCGCTTCCTGTGGAGCTCCGCCAGCGACTACTTCGGCCGCAAGATCACCTATGCCATCTTCTTCGC
CTTCGGCGCCGCGTTGTACATGGCGGTGCCGGCCGTCGGCTCGTCCGGCAACGTGGCCCTGTTCGTGGTCTGCTACTTCC
TGATCCTGACCATGTATGGCGGCGGCTTCAGCACCATTCCCGCCTACCTGGCGGACATGTTCGGCACGGCCTACGTCGGC
GGCATCCATGGCCGCCTGCTGACCGCCTGGGCCGCCGCCGGCATTGCCGGCCCGGCGCTGGTCAACTACATCCGCGAGCA
CAAGCTGGCCATGGGTGTGCCCAGGTCAGAGGTCTATGTCGACACCCTGCACATCATGGCCGGCCTGCTGGTGGCGGGGT
TCGTCTGCAACCTGCTGATCCGGCCGGTGCATGAGCGCCACCACCTGCGCGAAGCCACCAGCGCAGCCTGA

Upstream 100 bases:

>100_bases
GGGATTGCGCCTTGGGCATGGCTTTTGCTGAACCACGCACTCCAGCCCGTCGCATCACGCGCAAAAAAGAGGCTGCCACT
TCCAGGTAGGAGACACCTTC

Downstream 100 bases:

>100_bases
GCGCCACCCCGGCTTCCGATACCAATACACAGGAGACACCACCGTGCAAGACGACCGTACTTTCGGCAAGACGCTGCTGC
TGCTCGCGTTCTGGGCATAC

Product: major facilitator superfamily transporter OFA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MSYPAQAQTPSQKSQHASPSRPASRPSAFSKEAIIARPGFNRWMVPPAALAVHLCIGQAYAFSVFNEPLTRILGVTQSAP
GDWQLTTLGWVFSLAIFFLGISAAFAGKWLEKVGPRRTMFTAACCFGGGFLVSALGIWLHQIWLLYLGYGVLGGIGLGLG
YVSPVSTLIRWFPDRRGMATGMAIMGFGGGAMIGAPLSVALMNYFKSATSAGVAQTFLVMGVIYFISMSIGALAIRIPAP
GWAPPGYVPTTKARKMVTHANVHIDQALKTPQFYLLWVILFLNITAGIGVLGQAAVMIQETFKGSITAAAAAGFVGLLSI
GNMTGRFLWSSASDYFGRKITYAIFFAFGAALYMAVPAVGSSGNVALFVVCYFLILTMYGGGFSTIPAYLADMFGTAYVG
GIHGRLLTAWAAAGIAGPALVNYIREHKLAMGVPRSEVYVDTLHIMAGLLVAGFVCNLLIRPVHERHHLREATSAA

Sequences:

>Translated_476_residues
MSYPAQAQTPSQKSQHASPSRPASRPSAFSKEAIIARPGFNRWMVPPAALAVHLCIGQAYAFSVFNEPLTRILGVTQSAP
GDWQLTTLGWVFSLAIFFLGISAAFAGKWLEKVGPRRTMFTAACCFGGGFLVSALGIWLHQIWLLYLGYGVLGGIGLGLG
YVSPVSTLIRWFPDRRGMATGMAIMGFGGGAMIGAPLSVALMNYFKSATSAGVAQTFLVMGVIYFISMSIGALAIRIPAP
GWAPPGYVPTTKARKMVTHANVHIDQALKTPQFYLLWVILFLNITAGIGVLGQAAVMIQETFKGSITAAAAAGFVGLLSI
GNMTGRFLWSSASDYFGRKITYAIFFAFGAALYMAVPAVGSSGNVALFVVCYFLILTMYGGGFSTIPAYLADMFGTAYVG
GIHGRLLTAWAAAGIAGPALVNYIREHKLAMGVPRSEVYVDTLHIMAGLLVAGFVCNLLIRPVHERHHLREATSAA
>Mature_475_residues
SYPAQAQTPSQKSQHASPSRPASRPSAFSKEAIIARPGFNRWMVPPAALAVHLCIGQAYAFSVFNEPLTRILGVTQSAPG
DWQLTTLGWVFSLAIFFLGISAAFAGKWLEKVGPRRTMFTAACCFGGGFLVSALGIWLHQIWLLYLGYGVLGGIGLGLGY
VSPVSTLIRWFPDRRGMATGMAIMGFGGGAMIGAPLSVALMNYFKSATSAGVAQTFLVMGVIYFISMSIGALAIRIPAPG
WAPPGYVPTTKARKMVTHANVHIDQALKTPQFYLLWVILFLNITAGIGVLGQAAVMIQETFKGSITAAAAAGFVGLLSIG
NMTGRFLWSSASDYFGRKITYAIFFAFGAALYMAVPAVGSSGNVALFVVCYFLILTMYGGGFSTIPAYLADMFGTAYVGG
IHGRLLTAWAAAGIAGPALVNYIREHKLAMGVPRSEVYVDTLHIMAGLLVAGFVCNLLIRPVHERHHLREATSAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789969, Length=382, Percent_Identity=25.3926701570681, Blast_Score=105, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI115532490, Length=350, Percent_Identity=24.2857142857143, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI115532488, Length=350, Percent_Identity=24.2857142857143, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50676; Mature: 50545

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPAQAQTPSQKSQHASPSRPASRPSAFSKEAIIARPGFNRWMVPPAALAVHLCIGQAY
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
AFSVFNEPLTRILGVTQSAPGDWQLTTLGWVFSLAIFFLGISAAFAGKWLEKVGPRRTMF
HHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TAACCFGGGFLVSALGIWLHQIWLLYLGYGVLGGIGLGLGYVSPVSTLIRWFPDRRGMAT
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
GMAIMGFGGGAMIGAPLSVALMNYFKSATSAGVAQTFLVMGVIYFISMSIGALAIRIPAP
CEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
GWAPPGYVPTTKARKMVTHANVHIDQALKTPQFYLLWVILFLNITAGIGVLGQAAVMIQE
CCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFKGSITAAAAAGFVGLLSIGNMTGRFLWSSASDYFGRKITYAIFFAFGAALYMAVPAVG
HHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSGNVALFVVCYFLILTMYGGGFSTIPAYLADMFGTAYVGGIHGRLLTAWAAAGIAGPAL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH
VNYIREHKLAMGVPRSEVYVDTLHIMAGLLVAGFVCNLLIRPVHERHHLREATSAA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYPAQAQTPSQKSQHASPSRPASRPSAFSKEAIIARPGFNRWMVPPAALAVHLCIGQAY
CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
AFSVFNEPLTRILGVTQSAPGDWQLTTLGWVFSLAIFFLGISAAFAGKWLEKVGPRRTMF
HHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TAACCFGGGFLVSALGIWLHQIWLLYLGYGVLGGIGLGLGYVSPVSTLIRWFPDRRGMAT
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
GMAIMGFGGGAMIGAPLSVALMNYFKSATSAGVAQTFLVMGVIYFISMSIGALAIRIPAP
CEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
GWAPPGYVPTTKARKMVTHANVHIDQALKTPQFYLLWVILFLNITAGIGVLGQAAVMIQE
CCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFKGSITAAAAAGFVGLLSIGNMTGRFLWSSASDYFGRKITYAIFFAFGAALYMAVPAVG
HHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSGNVALFVVCYFLILTMYGGGFSTIPAYLADMFGTAYVGGIHGRLLTAWAAAGIAGPAL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH
VNYIREHKLAMGVPRSEVYVDTLHIMAGLLVAGFVCNLLIRPVHERHHLREATSAA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]