| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695054
Identifier: 116695054
GI number: 116695054
Start: 1256437
End: 1257435
Strand: Direct
Name: 116695054
Synonym: H16_B1109
Alternate gene names: NA
Gene position: 1256437-1257435 (Clockwise)
Preceding gene: 116695051
Following gene: 116695057
Centisome position: 43.14
GC content: 66.17
Gene sequence:
>999_bases ATGAGCCAACCAGACACCGCCTACGCCCTGGCCGAACTCCACCGCGAATCGCGCATGGGCGCGTTCGGTTCGGAAACCCG CCAGCGCGAGATCCGCCGCATCGACCTGTCCGACTACGCGCGGCGCAAGGCGCAGATCGCCGACGAACTGTGGCAGGCAT CGGTCGACGTCGGCTTCTTCCAGATCGCCAACCACGGCATCGACCTGACCAGCGTGCGCGAAGCCTTTGCCATGACCGAG CGCTTCTTCGCGCTGCCTGACGCCGTCAAGGCGCAATACCCGCTGCAGAAGGCCAACAACGCCGGCTGGGAAAGCCGCGC GCAGGTGCGCCCCTCGACCGGCACCCCGGACCAGAAGGAGTCCTACCAGATCACGCGCCCGCACATGGCCGGGCTGTGGC CCGGCGATGACGAACTGGAAGGCTTTCGCGCCACCATGCTTGCCTTCGAGGCGCAATGCTGGGAGGTGGGCATGAAGGTG CTGTCATGCTTCGCCGGCAAGCTCGGCTTTGCCAGCGACTTCTTCACGCAGGCGCACGATCCGCGGGCGCCGGACTACCA GAGCACGCTGCGGCTGCTGCACTACTACGCGATCCCGCCCGAACTGCGCGACAAGCTGGAGCTCTGGCGCGCCGGCGCGC ATACGGATTTCGATTGCCTGACGCTGCTGTTCCAGCGCCCCGGCCAGGGCGGGCTGCAGGTCTGCCCCGGCAAGGAGATG GAGGCGCAGGCATGGACCCCGATCGAGCCGGACGAGGAAGTCATCACCTGCAATATTGGCGACATGCTGATGCGCTGGAG CGACGACCGGCTGCCGTCGAACTTCCACCGCGTGCGCAATCCCGCGCCGGATGAATACATGGGCCCGCGCTACAGCATGG CGTTCTTCTGCCAGGCCAACCGAGGTGCGATGATCGAAGGGCCGGGTGGCAAGTATCCGCCGATCAGCGCGGGGGACTAC CTGCGGCAGCGGGTGAATGCGAATTTCAAGGGGTATTGA
Upstream 100 bases:
>100_bases AGGCGACCTCAGGAGCGCGTTGTCCCGGCGTGCGTTGCCATGGTGGTCTGCCTGTGCCGGCGAGGGGCCAATCCCTGACC CGCTTTGCACAAGGAACACC
Downstream 100 bases:
>100_bases GGCGCGGAAGAATTTCCATGCCGACGGTCTGCTCCCCCTCTCCCGCTTGCGGGAGAGGGAGTCCACCCGCAGTCGCTGGA CGCGCCGGTAGTGAGCCTAC
Product: dioxygenase 2OG-Fe(II) oxygenase superfamily protein
Products: NA
Alternate protein names: Oxidoreductase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; Flavonol Synthase/Dioxygenase; 2og-Fe(Ii) Oxygenase; Isopenicillin N Synthase; 2OG-Fe(II) Oxygenase Family Protein; Iron/Ascorbate Oxidoreductase Family Protein; 1-Aminocyclopropane-1-Carboxylate Oxidase; Oxygenase; 2-Oxobutyrate Oxidase; 2OG-Fe(II) Oxygenase Superfamily Dioxygenase; Isopenicillin N Synthase And Related Dioxygenases; Oxidoreductase 2og-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily; Iron/Ascorbate Dependent Oxidoreductase; Iron/Ascorbate-Dependent Oxidoreductase Family Protein; Oxidoreductase Iron/Ascorbate Family Protein; Iron/Ascorbate Oxidoreductase; Oxidoreductase Iron/Ascorbate Family; Fe-Containing Oxidoreductase; Isopenicillin-N Synthase; 2-Oxoglutarate And Fe(Ii)-Dependent Oxygenase; Dioxygenase; Oxygenase/Oxidoreductase
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSQPDTAYALAELHRESRMGAFGSETRQREIRRIDLSDYARRKAQIADELWQASVDVGFFQIANHGIDLTSVREAFAMTE RFFALPDAVKAQYPLQKANNAGWESRAQVRPSTGTPDQKESYQITRPHMAGLWPGDDELEGFRATMLAFEAQCWEVGMKV LSCFAGKLGFASDFFTQAHDPRAPDYQSTLRLLHYYAIPPELRDKLELWRAGAHTDFDCLTLLFQRPGQGGLQVCPGKEM EAQAWTPIEPDEEVITCNIGDMLMRWSDDRLPSNFHRVRNPAPDEYMGPRYSMAFFCQANRGAMIEGPGGKYPPISAGDY LRQRVNANFKGY
Sequences:
>Translated_332_residues MSQPDTAYALAELHRESRMGAFGSETRQREIRRIDLSDYARRKAQIADELWQASVDVGFFQIANHGIDLTSVREAFAMTE RFFALPDAVKAQYPLQKANNAGWESRAQVRPSTGTPDQKESYQITRPHMAGLWPGDDELEGFRATMLAFEAQCWEVGMKV LSCFAGKLGFASDFFTQAHDPRAPDYQSTLRLLHYYAIPPELRDKLELWRAGAHTDFDCLTLLFQRPGQGGLQVCPGKEM EAQAWTPIEPDEEVITCNIGDMLMRWSDDRLPSNFHRVRNPAPDEYMGPRYSMAFFCQANRGAMIEGPGGKYPPISAGDY LRQRVNANFKGY >Mature_331_residues SQPDTAYALAELHRESRMGAFGSETRQREIRRIDLSDYARRKAQIADELWQASVDVGFFQIANHGIDLTSVREAFAMTER FFALPDAVKAQYPLQKANNAGWESRAQVRPSTGTPDQKESYQITRPHMAGLWPGDDELEGFRATMLAFEAQCWEVGMKVL SCFAGKLGFASDFFTQAHDPRAPDYQSTLRLLHYYAIPPELRDKLELWRAGAHTDFDCLTLLFQRPGQGGLQVCPGKEME AQAWTPIEPDEEVITCNIGDMLMRWSDDRLPSNFHRVRNPAPDEYMGPRYSMAFFCQANRGAMIEGPGGKYPPISAGDYL RQRVNANFKGY
Specific function: Unknown
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI85816264, Length=288, Percent_Identity=27.4305555555556, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI28572124, Length=279, Percent_Identity=25.8064516129032, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37623; Mature: 37492
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPDTAYALAELHRESRMGAFGSETRQREIRRIDLSDYARRKAQIADELWQASVDVGFF CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHH QIANHGIDLTSVREAFAMTERFFALPDAVKAQYPLQKANNAGWESRAQVRPSTGTPDQKE HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCEECCCCCCCCCCC SYQITRPHMAGLWPGDDELEGFRATMLAFEAQCWEVGMKVLSCFAGKLGFASDFFTQAHD CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC PRAPDYQSTLRLLHYYAIPPELRDKLELWRAGAHTDFDCLTLLFQRPGQGGLQVCPGKEM CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEECCCCCC EAQAWTPIEPDEEVITCNIGDMLMRWSDDRLPSNFHRVRNPAPDEYMGPRYSMAFFCQAN CCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHCCCCCCHHCCCCCCEEEEEECC RGAMIEGPGGKYPPISAGDYLRQRVNANFKGY CCEEEECCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SQPDTAYALAELHRESRMGAFGSETRQREIRRIDLSDYARRKAQIADELWQASVDVGFF CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHH QIANHGIDLTSVREAFAMTERFFALPDAVKAQYPLQKANNAGWESRAQVRPSTGTPDQKE HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCEECCCCCCCCCCC SYQITRPHMAGLWPGDDELEGFRATMLAFEAQCWEVGMKVLSCFAGKLGFASDFFTQAHD CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC PRAPDYQSTLRLLHYYAIPPELRDKLELWRAGAHTDFDCLTLLFQRPGQGGLQVCPGKEM CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEECCCCCC EAQAWTPIEPDEEVITCNIGDMLMRWSDDRLPSNFHRVRNPAPDEYMGPRYSMAFFCQAN CCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHCCCCCCHHCCCCCCEEEEEECC RGAMIEGPGGKYPPISAGDYLRQRVNANFKGY CCEEEECCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA