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The map label for this gene is cyoC3 [H]

Identifier: 116694972

GI number: 116694972

Start: 1160833

End: 1161489

Strand: Direct

Name: cyoC3 [H]

Synonym: H16_B1027

Alternate gene names: 116694972

Gene position: 1160833-1161489 (Clockwise)

Preceding gene: 116694971

Following gene: 116694973

Centisome position: 39.86

GC content: 62.86

Gene sequence:

>657_bases
ATGGCTGACACGACCTTTCCCAACCATGTGAGCGGCACCGGCACCGCGGACGCGGCCCCGCCGGGAGGCTACCAGTTCTA
CCTGCCCGAAGACCATCACCCGCAGAACGGGACGCTGCTGGGGTTCTGGCTTTACCTGATGAGCGACTGCCTGATATTCG
CTTGCCTGTTCGCCGCGTATGGCGTGCTGGGCCGGGAGTATGCGGGGGGACCGAGCGGGGCAGAGCTGTTCGAGCTGCCG
CTGGTGGCACTGAACACCTCGTTCCTGCTGTTGTCTTCGATTACCTACGGCTTTGCCATGCTGCAGATGCAGCAGAACCG
CATCGCCGGAACCCAGATCTGGCTGGCCATCACGGGGGTCTTCGGCGCGGGGTTCCTGGCGGTCGAGCTTTATGAGTTCG
CGCACCTGATCAATGAGGGCGCAGGGCCGCAGCGCAGCGCGTTCCTGACCTCGTTCTTCGCACTGGTCGGAACCCACGGG
CTGCATGTCACGTGCGGCATCATCTGGCTGGTCGTGCTGATGACCCAGGTGGCGCAGCACGGGCTGATCACGGCCAACAA
GCGCAGGCTGATGTGCCTGTCGATGTTCTGGCACTTTCTTGACGTCGTCTGGATCGGCGTCTTTACCTTCGTCTACCTGA
TGGGAGCGTTGCCATGA

Upstream 100 bases:

>100_bases
GGCGCGATCATCCATACGTTCAACTACCAGCGCGACTATTACCTCCCGGCCGACCTGGTGGTCCAGACCGAAGCGGCGCG
CACACAACGGATGGCTGGCC

Downstream 100 bases:

>100_bases
GCGCGCACGACGAAACGCTGGACAGCCACGGACACAGCCACGGGCATGACGAGGACGTGGGGCCGCATGCCACGCTGGGC
GGCTACCTGACGGGCTTCGT

Product: bo3-type chinol oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MADTTFPNHVSGTGTADAAPPGGYQFYLPEDHHPQNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGPSGAELFELP
LVALNTSFLLLSSITYGFAMLQMQQNRIAGTQIWLAITGVFGAGFLAVELYEFAHLINEGAGPQRSAFLTSFFALVGTHG
LHVTCGIIWLVVLMTQVAQHGLITANKRRLMCLSMFWHFLDVVWIGVFTFVYLMGALP

Sequences:

>Translated_218_residues
MADTTFPNHVSGTGTADAAPPGGYQFYLPEDHHPQNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGPSGAELFELP
LVALNTSFLLLSSITYGFAMLQMQQNRIAGTQIWLAITGVFGAGFLAVELYEFAHLINEGAGPQRSAFLTSFFALVGTHG
LHVTCGIIWLVVLMTQVAQHGLITANKRRLMCLSMFWHFLDVVWIGVFTFVYLMGALP
>Mature_217_residues
ADTTFPNHVSGTGTADAAPPGGYQFYLPEDHHPQNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGPSGAELFELPL
VALNTSFLLLSSITYGFAMLQMQQNRIAGTQIWLAITGVFGAGFLAVELYEFAHLINEGAGPQRSAFLTSFFALVGTHGL
HVTCGIIWLVVLMTQVAQHGLITANKRRLMCLSMFWHFLDVVWIGVFTFVYLMGALP

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=187, Percent_Identity=60.427807486631, Blast_Score=235, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 23824; Mature: 23693

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTTFPNHVSGTGTADAAPPGGYQFYLPEDHHPQNGTLLGFWLYLMSDCLIFACLFAAY
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GVLGREYAGGPSGAELFELPLVALNTSFLLLSSITYGFAMLQMQQNRIAGTQIWLAITGV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FGAGFLAVELYEFAHLINEGAGPQRSAFLTSFFALVGTHGLHVTCGIIWLVVLMTQVAQH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GLITANKRRLMCLSMFWHFLDVVWIGVFTFVYLMGALP
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADTTFPNHVSGTGTADAAPPGGYQFYLPEDHHPQNGTLLGFWLYLMSDCLIFACLFAAY
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GVLGREYAGGPSGAELFELPLVALNTSFLLLSSITYGFAMLQMQQNRIAGTQIWLAITGV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FGAGFLAVELYEFAHLINEGAGPQRSAFLTSFFALVGTHGLHVTCGIIWLVVLMTQVAQH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GLITANKRRLMCLSMFWHFLDVVWIGVFTFVYLMGALP
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]