| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694917
Identifier: 116694917
GI number: 116694917
Start: 1094984
End: 1096051
Strand: Direct
Name: 116694917
Synonym: H16_B0972
Alternate gene names: NA
Gene position: 1094984-1096051 (Clockwise)
Preceding gene: 116694916
Following gene: 116694919
Centisome position: 37.6
GC content: 67.04
Gene sequence:
>1068_bases ATGATGACGACAACGGTTTCTTCGGCAGCGCTTGCGTTCCAGCGGGCGATGCCGGTCACACGCTTGCTGGATTGCGGCAT GGACTATGCCGACGCCGTCCGGCTGTTCGACGCCACCAGCCGGGGAGAGGATTGGGATCGCGTGGCCGAGTCGCTCGCCG ATGCTCAGCTGGAGCGCGCCGAGCATGCTGCCAGGGCCGGCCACCTGGTGACAGCCGCCCAGGCCCAGTCCATGGCGATT GCCGACCTGGTCTTTGCGCAGATGGCCTTCAATCACGACGCGCCACGCAAACTCGGCTTGTACAGTCGCCTGGTGGCTGC GACGCACCAGCTTTGCCACTGGTCCGCACAAGGCCTCGAGCGCGTTGAGCTTTCATTCGCAAATGGTCGCCTGACAGGGT GGCTGATGCGCCCGCCAGCCGGCCACGCGCGCGGCACCGTGCTGCTCTTTGGCGGGCAGAGCGGCTGGGGGGTGGCATAC CTGCCGCTGGCGCGGGCCCTGGCGGAACGCGGTCTCGCCACGCTGATGGCGGAAGGCCCGGGGCAGGGCGAAACCCGGCT GGTCCACGGCATTCATGTCGACGTGGATATTCCCGCGGCCTACCGGTGCTTTGTGTCACGGATAGCCGAGGATGCATCGC TTGGCGTCCCCGGCATCTGGGGGAACAGCGTGGGCGGGCTCTGGGCGGCAGCCACGGCAGCGACGGACGACAGGATCCGG GCGTGCTGCATCAACGGTGCCCTCGCAGCTCCCACACTGCTGCCGTTCCGGACGTTCGAGGAGCAGGCAGCCGCCATGCT GGGCAGCACGAACCAGGCAGCCATCCAGGCCAATTTCGAACGCATGCGCTTTCACTCGCACCGCGACAGGATCGCTTGCC CGCTGCTCGTGCTGCATGGCGGCGAGGATCCGTTGGTGAAGCTGGAAGACCAGCAGCCGTTCCTGGACGCGGCGCTCACG GACGACGTGACGCTACGAATCTGGCCGGATGGCGAGCATACGATCTACAACCACGCGGCCGAGCGGACTGCACTGGTGGC GGATTGGTTCGCGGACCGGCTCTGCTGA
Upstream 100 bases:
>100_bases TGGTCGATTCCCTGCGCCAGAAGCTGCACTGGCGCGGTGCGGCGCAATCCAGCATGCTGGCCGGGACCAGCGCAGCGGCT GTTTCGTGAGCGCGGGAGCC
Downstream 100 bases:
>100_bases ATGGACGCCGCGCGCCGTCAAGCGCGCCGGATCTTCGCTTCTTCCACAGCCGCGCGCACGCACTCGGCCAGCAACTCTGA CGCGCGGGTGCGCGTCGCGC
Product: dipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MMTTTVSSAALAFQRAMPVTRLLDCGMDYADAVRLFDATSRGEDWDRVAESLADAQLERAEHAARAGHLVTAAQAQSMAI ADLVFAQMAFNHDAPRKLGLYSRLVAATHQLCHWSAQGLERVELSFANGRLTGWLMRPPAGHARGTVLLFGGQSGWGVAY LPLARALAERGLATLMAEGPGQGETRLVHGIHVDVDIPAAYRCFVSRIAEDASLGVPGIWGNSVGGLWAAATAATDDRIR ACCINGALAAPTLLPFRTFEEQAAAMLGSTNQAAIQANFERMRFHSHRDRIACPLLVLHGGEDPLVKLEDQQPFLDAALT DDVTLRIWPDGEHTIYNHAAERTALVADWFADRLC
Sequences:
>Translated_355_residues MMTTTVSSAALAFQRAMPVTRLLDCGMDYADAVRLFDATSRGEDWDRVAESLADAQLERAEHAARAGHLVTAAQAQSMAI ADLVFAQMAFNHDAPRKLGLYSRLVAATHQLCHWSAQGLERVELSFANGRLTGWLMRPPAGHARGTVLLFGGQSGWGVAY LPLARALAERGLATLMAEGPGQGETRLVHGIHVDVDIPAAYRCFVSRIAEDASLGVPGIWGNSVGGLWAAATAATDDRIR ACCINGALAAPTLLPFRTFEEQAAAMLGSTNQAAIQANFERMRFHSHRDRIACPLLVLHGGEDPLVKLEDQQPFLDAALT DDVTLRIWPDGEHTIYNHAAERTALVADWFADRLC >Mature_355_residues MMTTTVSSAALAFQRAMPVTRLLDCGMDYADAVRLFDATSRGEDWDRVAESLADAQLERAEHAARAGHLVTAAQAQSMAI ADLVFAQMAFNHDAPRKLGLYSRLVAATHQLCHWSAQGLERVELSFANGRLTGWLMRPPAGHARGTVLLFGGQSGWGVAY LPLARALAERGLATLMAEGPGQGETRLVHGIHVDVDIPAAYRCFVSRIAEDASLGVPGIWGNSVGGLWAAATAATDDRIR ACCINGALAAPTLLPFRTFEEQAAAMLGSTNQAAIQANFERMRFHSHRDRIACPLLVLHGGEDPLVKLEDQQPFLDAALT DDVTLRIWPDGEHTIYNHAAERTALVADWFADRLC
Specific function: L-nicotine is used as a growth substrate. Plays a role in nicotine catabolism by cleaving a C-C bond in 2,6- dihydroxypseudooxyicotine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0255 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010520 [H]
Pfam domain/function: PF06500 DUF1100 [H]
EC number: NA
Molecular weight: Translated: 38406; Mature: 38406
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTTVSSAALAFQRAMPVTRLLDCGMDYADAVRLFDATSRGEDWDRVAESLADAQLERA CCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH EHAARAGHLVTAAQAQSMAIADLVFAQMAFNHDAPRKLGLYSRLVAATHQLCHWSAQGLE HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH RVELSFANGRLTGWLMRPPAGHARGTVLLFGGQSGWGVAYLPLARALAERGLATLMAEGP EEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHEEEECCC GQGETRLVHGIHVDVDIPAAYRCFVSRIAEDASLGVPGIWGNSVGGLWAAATAATDDRIR CCCCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHH ACCINGALAAPTLLPFRTFEEQAAAMLGSTNQAAIQANFERMRFHSHRDRIACPLLVLHG HHEECCCHHCCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC GEDPLVKLEDQQPFLDAALTDDVTLRIWPDGEHTIYNHAAERTALVADWFADRLC CCCCEEEECCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMTTTVSSAALAFQRAMPVTRLLDCGMDYADAVRLFDATSRGEDWDRVAESLADAQLERA CCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH EHAARAGHLVTAAQAQSMAIADLVFAQMAFNHDAPRKLGLYSRLVAATHQLCHWSAQGLE HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH RVELSFANGRLTGWLMRPPAGHARGTVLLFGGQSGWGVAYLPLARALAERGLATLMAEGP EEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHEEEECCC GQGETRLVHGIHVDVDIPAAYRCFVSRIAEDASLGVPGIWGNSVGGLWAAATAATDDRIR CCCCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHH ACCINGALAAPTLLPFRTFEEQAAAMLGSTNQAAIQANFERMRFHSHRDRIACPLLVLHG HHEECCCHHCCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC GEDPLVKLEDQQPFLDAALTDDVTLRIWPDGEHTIYNHAAERTALVADWFADRLC CCCCEEEECCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11514508; 12618462 [H]