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The map label for this gene is ccmL2 [H]

Identifier: 116694903

GI number: 116694903

Start: 1079887

End: 1080336

Strand: Direct

Name: ccmL2 [H]

Synonym: H16_B0958

Alternate gene names: 116694903

Gene position: 1079887-1080336 (Clockwise)

Preceding gene: 116694902

Following gene: 116694904

Centisome position: 37.08

GC content: 64.67

Gene sequence:

>450_bases
ATGAAATCAAGCGTTCGCCGGTGGTGCGTACTTGGGTGTTTGCTGGGCGGTCTGCTGGCCAATGCAATCGGCGCCGAGCC
GGCACAGGCCGATGCCGAGCAGGCTCTGCAGGCCCGGGTCACGAGGCTGGCCGTCGACCTGCGTTGCGTGGTATGCCAGA
ACCAGTCGCTTGCCGATTCCAATGCCAGCCTGGCGATTGACTTGCGCAGCGAGATTGCCGGCATGCTGCGCGATGGGAAA
AGCGAGCGCGATGTGACCGAGTTCATGGTGCAGCGCTACGGCGATTTCGTGCTGTACAGCCCGCCGCTGCAGCCCACCAC
CTGGCTCCTGTGGCTTGGCCCGTTCCTGCTCATGTTGGTGGGAATGGTGGTGCTCTACCGGCATGCTGCCGGATCGCGGG
CACGCGAGCGGGCGGGTAAGGCTGGCGGCAGCGAGGAGGGAAGCATATGA

Upstream 100 bases:

>100_bases
CTGACCGAGGAGGTGGTGCGCAAAGAACTGTTGCCGATGTTGGCGGCGCTCGAGAACGAGCCGGACGTAGCACTGGCAAG
CAGGGGAAAAGGGGGCTGAC

Downstream 100 bases:

>100_bases
CATCGGCGCAGGTATTCTGGGGATTCGCCACCGCCCTGACCATTGGTGCGCTGCTGACCGTATTGCAGCCAATGGTGGCA
GGTATCGCCGTTGCGAAAGG

Product: cytochrome c biogenesis factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKSSVRRWCVLGCLLGGLLANAIGAEPAQADAEQALQARVTRLAVDLRCVVCQNQSLADSNASLAIDLRSEIAGMLRDGK
SERDVTEFMVQRYGDFVLYSPPLQPTTWLLWLGPFLLMLVGMVVLYRHAAGSRARERAGKAGGSEEGSI

Sequences:

>Translated_149_residues
MKSSVRRWCVLGCLLGGLLANAIGAEPAQADAEQALQARVTRLAVDLRCVVCQNQSLADSNASLAIDLRSEIAGMLRDGK
SERDVTEFMVQRYGDFVLYSPPLQPTTWLLWLGPFLLMLVGMVVLYRHAAGSRARERAGKAGGSEEGSI
>Mature_149_residues
MKSSVRRWCVLGCLLGGLLANAIGAEPAQADAEQALQARVTRLAVDLRCVVCQNQSLADSNASLAIDLRSEIAGMLRDGK
SERDVTEFMVQRYGDFVLYSPPLQPTTWLLWLGPFLLMLVGMVVLYRHAAGSRARERAGKAGGSEEGSI

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=117, Percent_Identity=40.1709401709402, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1790512, Length=61, Percent_Identity=47.5409836065574, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 16151; Mature: 16151

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSVRRWCVLGCLLGGLLANAIGAEPAQADAEQALQARVTRLAVDLRCVVCQNQSLADS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
NASLAIDLRSEIAGMLRDGKSERDVTEFMVQRYGDFVLYSPPLQPTTWLLWLGPFLLMLV
CCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHH
GMVVLYRHAAGSRARERAGKAGGSEEGSI
HHHHHHHHHCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKSSVRRWCVLGCLLGGLLANAIGAEPAQADAEQALQARVTRLAVDLRCVVCQNQSLADS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
NASLAIDLRSEIAGMLRDGKSERDVTEFMVQRYGDFVLYSPPLQPTTWLLWLGPFLLMLV
CCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHH
GMVVLYRHAAGSRARERAGKAGGSEEGSI
HHHHHHHHHCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]