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The map label for this gene is ccmC2 [H]

Identifier: 116694899

GI number: 116694899

Start: 1075924

End: 1076661

Strand: Direct

Name: ccmC2 [H]

Synonym: H16_B0954

Alternate gene names: 116694899

Gene position: 1075924-1076661 (Clockwise)

Preceding gene: 116694898

Following gene: 116694900

Centisome position: 36.94

GC content: 65.58

Gene sequence:

>738_bases
ATGGCCACCTTGAATATCTGGAAGTACGCCGCGCCCCAAGCCTTCTATCCGCTCGCCGGGCATCTGGTGCCATGGTTTGG
CGCTGCTGCCGCAGTGTCTGGCGCGATGGCGCTATACCTTGGCCTGGTGGTGGCGCCGCCCGATTTCCGCCAGGGCGAGG
TGTACCGCATCCTGTTCATCCATGTCGCGGCCGCCTGGATGTCGATGTTCATCTACGTGGTGATGGCCGTCTACGCCGGG
CTTGGCCTGGTGTTCGGCACCCGTCTGTCGTCGCTGATGGCAACCGCGCTGGCGCCCAGCGGTGCGTTGTTCACCTTCCT
CACGCTGTGGACCGGCGCACTTTGGGGCAAGCCGACCTGGGGCACCTACTGGGTATGGGACGCGCGCATGACCTCCGAGC
TGCTGCTGCTGTTCCTCTATCTCGGCTTCATCGCGCTGCAGGCCGCGATCGACGATCCACGGCGCGCAGCCAGGGCCGGC
GGGGTGCTGGCGCTGGTCGGATTGATCAACCTGCCGGTCATCTATTTCTCCGTGACCTGGTGGAACACGCTGCATCAGGG
GGCATCGGTCAGTCTGACCAAGGCGCCGCAGATGGCCGGCATCATGATCGTTGCCATGCTGGGCATGACCTTCGCCTTCT
GGATGTATGCGATCGCCGTCGCGCTGGCGCGGGTGCGCTGCCTGATCGCGCGCAGCGAGGCCGGCCGCAGGTGGTGGCGG
CAAGGCGAGGACATCTGA

Upstream 100 bases:

>100_bases
AGGCGAATCTTTCGCTGCTGGGGGCATGCCTGCTGACTGCCGTTGCGTCGGCGCCATGGGCCACCGCCGCGGCGCTCAGG
ATTGGATTGGAGTCTGTCTG

Downstream 100 bases:

>100_bases
AACCGACGCGCACTCGGATCAACGCGCTCAACAGCAGGGAGGGAATGATGGATCTGAATGGATTTTTTTCGATGGGTGGC
CAAGGCGCTTTCGTCTGGGG

Product: ABC transporter permease

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MATLNIWKYAAPQAFYPLAGHLVPWFGAAAAVSGAMALYLGLVVAPPDFRQGEVYRILFIHVAAAWMSMFIYVVMAVYAG
LGLVFGTRLSSLMATALAPSGALFTFLTLWTGALWGKPTWGTYWVWDARMTSELLLLFLYLGFIALQAAIDDPRRAARAG
GVLALVGLINLPVIYFSVTWWNTLHQGASVSLTKAPQMAGIMIVAMLGMTFAFWMYAIAVALARVRCLIARSEAGRRWWR
QGEDI

Sequences:

>Translated_245_residues
MATLNIWKYAAPQAFYPLAGHLVPWFGAAAAVSGAMALYLGLVVAPPDFRQGEVYRILFIHVAAAWMSMFIYVVMAVYAG
LGLVFGTRLSSLMATALAPSGALFTFLTLWTGALWGKPTWGTYWVWDARMTSELLLLFLYLGFIALQAAIDDPRRAARAG
GVLALVGLINLPVIYFSVTWWNTLHQGASVSLTKAPQMAGIMIVAMLGMTFAFWMYAIAVALARVRCLIARSEAGRRWWR
QGEDI
>Mature_244_residues
ATLNIWKYAAPQAFYPLAGHLVPWFGAAAAVSGAMALYLGLVVAPPDFRQGEVYRILFIHVAAAWMSMFIYVVMAVYAGL
GLVFGTRLSSLMATALAPSGALFTFLTLWTGALWGKPTWGTYWVWDARMTSELLLLFLYLGFIALQAAIDDPRRAARAGG
VLALVGLINLPVIYFSVTWWNTLHQGASVSLTKAPQMAGIMIVAMLGMTFAFWMYAIAVALARVRCLIARSEAGRRWWRQ
GEDI

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=232, Percent_Identity=46.1206896551724, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 26935; Mature: 26804

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLNIWKYAAPQAFYPLAGHLVPWFGAAAAVSGAMALYLGLVVAPPDFRQGEVYRILFI
CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
HVAAAWMSMFIYVVMAVYAGLGLVFGTRLSSLMATALAPSGALFTFLTLWTGALWGKPTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
GTYWVWDARMTSELLLLFLYLGFIALQAAIDDPRRAARAGGVLALVGLINLPVIYFSVTW
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
WNTLHQGASVSLTKAPQMAGIMIVAMLGMTFAFWMYAIAVALARVRCLIARSEAGRRWWR
HHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGEDI
CCCCC
>Mature Secondary Structure 
ATLNIWKYAAPQAFYPLAGHLVPWFGAAAAVSGAMALYLGLVVAPPDFRQGEVYRILFI
CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
HVAAAWMSMFIYVVMAVYAGLGLVFGTRLSSLMATALAPSGALFTFLTLWTGALWGKPTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
GTYWVWDARMTSELLLLFLYLGFIALQAAIDDPRRAARAGGVLALVGLINLPVIYFSVTW
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
WNTLHQGASVSLTKAPQMAGIMIVAMLGMTFAFWMYAIAVALARVRCLIARSEAGRRWWR
HHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGEDI
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]