| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694766
Identifier: 116694766
GI number: 116694766
Start: 927436
End: 928392
Strand: Direct
Name: 116694766
Synonym: H16_B0820
Alternate gene names: NA
Gene position: 927436-928392 (Clockwise)
Preceding gene: 116694765
Following gene: 116694768
Centisome position: 31.84
GC content: 66.04
Gene sequence:
>957_bases ATGGAAGCTGGCAAACCGAAGATCCTGATTGTCGGCGCCAACGGCCAGATCGGGTCTGAACTGGCACTGGCGCTGGCCGA GCGCTACGGGCGCACCAACGTGATCACCTCCGACGTGGTGCCCACCGGCCGCCATGTGCATCTGACGCACGAGATGCTCA ACGCCACCGACCGCGGCGAGCTGGCCACCGTGGTCGAGCGCCATGGCATCACCCAGGTCTACCTGCTGGCCGCCGCGCTG TCCGCCACCGGCGAAAAGGCGCCACAGTGGGCCTGGAACCTCAATATGACCAGCCTGCTCAATGTGCTGGAGCTGGCGCG GCAGACCGGGCTGGAGCGGGTGTTCTGGCCAAGCTCGATTGCAGCCTTCGGCCCGACCACGCCTGCCGGACAGACACCGC AGAAGACCGTGATGGAGCCCACCACGGTCTACGGCATCTCCAAGCAGGCGGGCGAGGGTTGGTGCCGCTGGTATCACGCC AACCACGGCGTGGATGTGCGCAGCGTGCGCTATCCGGGCCTGATCTCGCACAAGACGCCACCCGGCGGCGGCACCACCGA CTATGCGGTCGACATCTTCCATGCGGCGGTGACGGGCGAGCCCTACACCTGCTTCCTGAAGGAAGACGAAGCCCTGCCGA TGATGTATATGCCCGATGCGATCCGCGCCACCATCGAACTGATGGAAGCCCCGGCGGACAAGCTGAGCGAGCGCGGCAGC TACAACATCGCCGGCATGAGCTTCACGCCCGCGCAGATCGCCGCGGCCATCCGCGAGCAGGTGCCGGGCTTCCAGATCCG CTATGAACCCGACTATCGCCAGGCGATTGCGCAGGGCTGGCCGGATTCGATCGATGATTCGGTCGCGCGCGCGGACTGGG GGTGGAAGGCCCAGTATGGACTGAAGGAGATGGTCGCGGACATGCTTGCCAACCTGAAGGCCACGCTGGCGGGCTGA
Upstream 100 bases:
>100_bases CGCGCATCCGCGTGCAGATGAGCGCGCTGCATGACGAGGCCGCGCTGCAGGCGGCGCTGGATGCCTTCGGCCAGGCTGGC CGTGAACTGGGGCTGATCTG
Downstream 100 bases:
>100_bases AGCGCTATGGCCCCAACGGGAAGCGCGTGCGCGCAGTGGCTCACGGGATCAGGCCGCGCGCGCGCCCCAGAGCCACCGCT TCCGTACGGCTTTGCGCGCC
Product: L-threonine 3-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MEAGKPKILIVGANGQIGSELALALAERYGRTNVITSDVVPTGRHVHLTHEMLNATDRGELATVVERHGITQVYLLAAAL SATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSIAAFGPTTPAGQTPQKTVMEPTTVYGISKQAGEGWCRWYHA NHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHAAVTGEPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGS YNIAGMSFTPAQIAAAIREQVPGFQIRYEPDYRQAIAQGWPDSIDDSVARADWGWKAQYGLKEMVADMLANLKATLAG
Sequences:
>Translated_318_residues MEAGKPKILIVGANGQIGSELALALAERYGRTNVITSDVVPTGRHVHLTHEMLNATDRGELATVVERHGITQVYLLAAAL SATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSIAAFGPTTPAGQTPQKTVMEPTTVYGISKQAGEGWCRWYHA NHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHAAVTGEPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGS YNIAGMSFTPAQIAAAIREQVPGFQIRYEPDYRQAIAQGWPDSIDDSVARADWGWKAQYGLKEMVADMLANLKATLAG >Mature_318_residues MEAGKPKILIVGANGQIGSELALALAERYGRTNVITSDVVPTGRHVHLTHEMLNATDRGELATVVERHGITQVYLLAAAL SATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSIAAFGPTTPAGQTPQKTVMEPTTVYGISKQAGEGWCRWYHA NHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHAAVTGEPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGS YNIAGMSFTPAQIAAAIREQVPGFQIRYEPDYRQAIAQGWPDSIDDSVARADWGWKAQYGLKEMVADMLANLKATLAG
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sugar epimerase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI32566934, Length=311, Percent_Identity=43.0868167202572, Blast_Score=247, Evalue=7e-66, Organism=Drosophila melanogaster, GI24667531, Length=314, Percent_Identity=42.6751592356688, Blast_Score=259, Evalue=1e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 34629; Mature: 34629
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAGKPKILIVGANGQIGSELALALAERYGRTNVITSDVVPTGRHVHLTHEMLNATDRGE CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEHHHHCCCCCCH LATVVERHGITQVYLLAAALSATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSI HHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCCC AAFGPTTPAGQTPQKTVMEPTTVYGISKQAGEGWCRWYHANHGVDVRSVRYPGLISHKTP CCCCCCCCCCCCCHHHHCCCHHEEECCCCCCCCEEEEEECCCCCCEEEEECCCEECCCCC PGGGTTDYAVDIFHAAVTGEPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGS CCCCCCCHHHEEEHHEECCCCEEEEEECCCCCCEEECCHHHHHHHHHHHCCHHHHHCCCC YNIAGMSFTPAQIAAAIREQVPGFQIRYEPDYRQAIAQGWPDSIDDSVARADWGWKAQYG CEEECCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHCCCCCCHHCC LKEMVADMLANLKATLAG HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEAGKPKILIVGANGQIGSELALALAERYGRTNVITSDVVPTGRHVHLTHEMLNATDRGE CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEHHHHCCCCCCH LATVVERHGITQVYLLAAALSATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSI HHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCCC AAFGPTTPAGQTPQKTVMEPTTVYGISKQAGEGWCRWYHANHGVDVRSVRYPGLISHKTP CCCCCCCCCCCCCHHHHCCCHHEEECCCCCCCCEEEEEECCCCCCEEEEECCCEECCCCC PGGGTTDYAVDIFHAAVTGEPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGS CCCCCCCHHHEEEHHEECCCCEEEEEECCCCCCEEECCHHHHHHHHHHHCCHHHHHCCCC YNIAGMSFTPAQIAAAIREQVPGFQIRYEPDYRQAIAQGWPDSIDDSVARADWGWKAQYG CEEECCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHCCCCCCHHCC LKEMVADMLANLKATLAG HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA