BacMap

Definition	Ralstonia eutropha H16 chromosome 2, complete sequence.
Accession	NC_008314
Length	2,912,490

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The map label for this gene is yceI [H]

Identifier: 116694691

GI number: 116694691

Start: 834413

End: 835810

Strand: Direct

Name: yceI [H]

Synonym: H16_B0740

Alternate gene names: 116694691

Gene position: 834413-835810 (Clockwise)

Preceding gene: 116694690

Following gene: 116694693

Centisome position: 28.65

GC content: 68.17

Gene sequence:

>1398_bases
GTGACCACGGCCGACAGCGCCGGCCAGAGCGCGGCGGCGGCCCGCAGCGGCCCGCTCACGCGCGGCAATATCGTTGCCCG
CATCGAGCGCATGCCGGGCAATGCCATGCATATCCGCGCCCGGCTGCTGATCGGCCTGGCCACCTTCTTCGATGGCTTCG
ACGTCATCGCCATCGCAGCCACGCTGCCGCTGCTGATCGCGCAGTGGTCGCTGACGCCGGGCCAGATCGGCGTGCTGATC
GCTGCGCCTTCGGTCGGCCAGCTGGTCGGCGCGCTGCTGTTCCCGGGGCTGGCCGAGCGCTTCGGCCGGCTGCGCTCGAT
CGGCTGGAGCGCGGGCATCATCGGCCTGATGAGCATTGCCTGCGGCTTCGCGCCGTCGTTCGAGATCTTCTTGCTGCTGC
GCATCGTGCAGGGCCTCGGCCTTGGCGGTGAGCTGCCGGTGGCCGCCACCTATATCAACGAAGTCACGCGCGCGCATGGC
CGTGGGCGCTTCGTGCTGCTGTACGAGGTGGTGTTCCCGATCGGCCTGATGGTGTCCAACGGCGTTGGCGCCTGGCTGGT
GCCGCACTACGGCTGGGAGGTGATGTACTTCATCGGCGGCGTGCCGCTGGTGCTGTTCTTCATCCTGCGCCGCGTGATCC
CGGAATCGCCACGCTGGCTGGCGGAGAAAGGCCGTCTTGAAGAAGCCGATGCCGCACTGCGTGCGTTCGAGGCGCGCGCC
AAGGATCCGCTGCCGCCGCCGGTCAATGCCGGCAGCTACGACCGCATGACCCAGCACCCGCGCCGGCGCGTGCGTGACCT
GGTCAGCAAGGCCTACCTCGGCCGCACGCTGGCGGTATGGATGCTGTGGGCAACCTGCGGCTTTATCCAGTACGGGCTGT
CGACGTGGCTGCCCACGGTCTACAAGACCGTCTACCACGCGCCGCTGCAGCTGGCGCTGAACCTTGCCGCCGGCGCCTCG
GTGCTGGGCGTGGTCGGCTCGCTGGTGTGCGCGATGATTGTCGACAAGGTGGGCCGCAAGCCGGTGATCAACGTGTCGTT
CCTGCTGTGCGCGCTGTCGCTGGTGCTGGCGGGGGTGTTCCACGCTTCGAACGTGTATGTGGTAGCGACCTTCTGCGCGC
TGGCGATGGGCTTCCTGGCCAGCGGCTTTATCACCGCCTATGTTTACACGCCCGAGTTGTACCCGACCAGCGTCCGCGCG
ATGGGCTGCGGCCTGGGCGGCGCCTGGCTGAAGCTGGCGGCGATCTTCGCGCCTGGCCTGATCGCCAGCACCATTGGCAG
CGGCAACCTCAGCGTCGCCTTCTTCGCGCTGTCCGTGGTGCCGGCGCTGGCGGCTGTCACCGTGCATTTCCTTGGCATCG
AGACCAAGGGGCGGGTGCTGGAAGAACTGGAGGTCTGA

Upstream 100 bases:

>100_bases
GGGGAGCAACCCCCGAAGAATCAAACCGAGAAGCCCCGTGTTAACCCAGAGACAAGACGCAGCGTCCCCCGGCGCACCGG
TGGCCGCCACCGCAGGTATC

Downstream 100 bases:

>100_bases
ACGGGCGTGCTGGTCCCGTTCCCTTCGGGCCGCCCCGCAATCCGGGTGCGGCACTTTTTCTTTATTCCTGCGTGCGCAAC
AGCTTGCGCAGCCCCTGGTA

Product: major facilitator superfamily transporter AAHS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MTTADSAGQSAAAARSGPLTRGNIVARIERMPGNAMHIRARLLIGLATFFDGFDVIAIAATLPLLIAQWSLTPGQIGVLI
AAPSVGQLVGALLFPGLAERFGRLRSIGWSAGIIGLMSIACGFAPSFEIFLLLRIVQGLGLGGELPVAATYINEVTRAHG
RGRFVLLYEVVFPIGLMVSNGVGAWLVPHYGWEVMYFIGGVPLVLFFILRRVIPESPRWLAEKGRLEEADAALRAFEARA
KDPLPPPVNAGSYDRMTQHPRRRVRDLVSKAYLGRTLAVWMLWATCGFIQYGLSTWLPTVYKTVYHAPLQLALNLAAGAS
VLGVVGSLVCAMIVDKVGRKPVINVSFLLCALSLVLAGVFHASNVYVVATFCALAMGFLASGFITAYVYTPELYPTSVRA
MGCGLGGAWLKLAAIFAPGLIASTIGSGNLSVAFFALSVVPALAAVTVHFLGIETKGRVLEELEV

Sequences:

>Translated_465_residues
MTTADSAGQSAAAARSGPLTRGNIVARIERMPGNAMHIRARLLIGLATFFDGFDVIAIAATLPLLIAQWSLTPGQIGVLI
AAPSVGQLVGALLFPGLAERFGRLRSIGWSAGIIGLMSIACGFAPSFEIFLLLRIVQGLGLGGELPVAATYINEVTRAHG
RGRFVLLYEVVFPIGLMVSNGVGAWLVPHYGWEVMYFIGGVPLVLFFILRRVIPESPRWLAEKGRLEEADAALRAFEARA
KDPLPPPVNAGSYDRMTQHPRRRVRDLVSKAYLGRTLAVWMLWATCGFIQYGLSTWLPTVYKTVYHAPLQLALNLAAGAS
VLGVVGSLVCAMIVDKVGRKPVINVSFLLCALSLVLAGVFHASNVYVVATFCALAMGFLASGFITAYVYTPELYPTSVRA
MGCGLGGAWLKLAAIFAPGLIASTIGSGNLSVAFFALSVVPALAAVTVHFLGIETKGRVLEELEV
>Mature_464_residues
TTADSAGQSAAAARSGPLTRGNIVARIERMPGNAMHIRARLLIGLATFFDGFDVIAIAATLPLLIAQWSLTPGQIGVLIA
APSVGQLVGALLFPGLAERFGRLRSIGWSAGIIGLMSIACGFAPSFEIFLLLRIVQGLGLGGELPVAATYINEVTRAHGR
GRFVLLYEVVFPIGLMVSNGVGAWLVPHYGWEVMYFIGGVPLVLFFILRRVIPESPRWLAEKGRLEEADAALRAFEARAK
DPLPPPVNAGSYDRMTQHPRRRVRDLVSKAYLGRTLAVWMLWATCGFIQYGLSTWLPTVYKTVYHAPLQLALNLAAGASV
LGVVGSLVCAMIVDKVGRKPVINVSFLLCALSLVLAGVFHASNVYVVATFCALAMGFLASGFITAYVYTPELYPTSVRAM
GCGLGGAWLKLAAIFAPGLIASTIGSGNLSVAFFALSVVPALAAVTVHFLGIETKGRVLEELEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI24308167, Length=454, Percent_Identity=27.7533039647577, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI213021148, Length=480, Percent_Identity=24.1666666666667, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI24497476, Length=434, Percent_Identity=27.1889400921659, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI20070188, Length=434, Percent_Identity=27.1889400921659, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI166197673, Length=385, Percent_Identity=26.2337662337662, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI7662270, Length=358, Percent_Identity=22.6256983240223, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI166064021, Length=390, Percent_Identity=26.9230769230769, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI33457322, Length=343, Percent_Identity=23.6151603498542, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI24497478, Length=368, Percent_Identity=27.7173913043478, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI24497480, Length=373, Percent_Identity=27.0777479892761, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI31542327, Length=372, Percent_Identity=27.1505376344086, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI4506999, Length=401, Percent_Identity=25.4364089775561, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI157426885, Length=395, Percent_Identity=24.8101265822785, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI262399383, Length=306, Percent_Identity=22.2222222222222, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI4507005, Length=404, Percent_Identity=24.5049504950495, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI73695465, Length=269, Percent_Identity=26.3940520446097, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI23510410, Length=355, Percent_Identity=24.2253521126761, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI216548223, Length=305, Percent_Identity=25.5737704918033, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI11415038, Length=420, Percent_Identity=22.6190476190476, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI302148518, Length=342, Percent_Identity=23.3918128654971, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI148664184, Length=350, Percent_Identity=24.2857142857143, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI24497490, Length=388, Percent_Identity=23.1958762886598, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI21553331, Length=348, Percent_Identity=23.5632183908046, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI8923870, Length=417, Percent_Identity=22.7817745803357, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1788068, Length=453, Percent_Identity=25.3863134657837, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1786229, Length=384, Percent_Identity=26.5625, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI87082159, Length=397, Percent_Identity=25.9445843828715, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1789207, Length=433, Percent_Identity=25.635103926097, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1788074, Length=470, Percent_Identity=25.3191489361702, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI87082231, Length=186, Percent_Identity=31.7204301075269, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1790463, Length=475, Percent_Identity=25.0526315789474, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789312, Length=457, Percent_Identity=23.8512035010941, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI87081723, Length=424, Percent_Identity=25.9433962264151, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082404, Length=180, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI32564663, Length=451, Percent_Identity=23.7250554323725, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI193202825, Length=375, Percent_Identity=25.0666666666667, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71986689, Length=375, Percent_Identity=25.0666666666667, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17565978, Length=289, Percent_Identity=23.8754325259516, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI193208335, Length=285, Percent_Identity=24.9122807017544, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560496, Length=405, Percent_Identity=22.962962962963, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17565976, Length=332, Percent_Identity=21.6867469879518, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71980822, Length=168, Percent_Identity=30.3571428571429, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71985712, Length=286, Percent_Identity=25.5244755244755, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17554160, Length=394, Percent_Identity=21.8274111675127, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6319718, Length=328, Percent_Identity=25.609756097561, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321100, Length=386, Percent_Identity=25.3886010362694, Blast_Score=71, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320063, Length=487, Percent_Identity=22.5872689938398, Blast_Score=67, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6321334, Length=342, Percent_Identity=21.0526315789474, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320595, Length=221, Percent_Identity=24.8868778280543, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320007, Length=444, Percent_Identity=25, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320745, Length=429, Percent_Identity=25.1748251748252, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19922874, Length=432, Percent_Identity=24.0740740740741, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI19922616, Length=421, Percent_Identity=24.9406175771971, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI161078338, Length=350, Percent_Identity=27.4285714285714, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24647365, Length=350, Percent_Identity=27.4285714285714, Blast_Score=85, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24649618, Length=373, Percent_Identity=24.1286863270777, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24649616, Length=380, Percent_Identity=23.9473684210526, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355657, Length=353, Percent_Identity=24.929178470255, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649622, Length=371, Percent_Identity=23.4501347708895, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640198, Length=453, Percent_Identity=22.2958057395143, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24640196, Length=453, Percent_Identity=22.2958057395143, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24640200, Length=453, Percent_Identity=22.2958057395143, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI62484254, Length=379, Percent_Identity=22.6912928759894, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI17737451, Length=357, Percent_Identity=23.5294117647059, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24652312, Length=357, Percent_Identity=23.5294117647059, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24585484, Length=382, Percent_Identity=23.0366492146597, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI20129657, Length=387, Percent_Identity=23.5142118863049, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24668456, Length=348, Percent_Identity=25, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19920644, Length=342, Percent_Identity=25.7309941520468, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49540; Mature: 49409

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTADSAGQSAAAARSGPLTRGNIVARIERMPGNAMHIRARLLIGLATFFDGFDVIAIAA
CCCCCCCCCHHHHHCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
TLPLLIAQWSLTPGQIGVLIAAPSVGQLVGALLFPGLAERFGRLRSIGWSAGIIGLMSIA
HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
CGFAPSFEIFLLLRIVQGLGLGGELPVAATYINEVTRAHGRGRFVLLYEVVFPIGLMVSN
HCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCC
GVGAWLVPHYGWEVMYFIGGVPLVLFFILRRVIPESPRWLAEKGRLEEADAALRAFEARA
CCCEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHC
KDPLPPPVNAGSYDRMTQHPRRRVRDLVSKAYLGRTLAVWMLWATCGFIQYGLSTWLPTV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKTVYHAPLQLALNLAAGASVLGVVGSLVCAMIVDKVGRKPVINVSFLLCALSLVLAGVF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
HASNVYVVATFCALAMGFLASGFITAYVYTPELYPTSVRAMGCGLGGAWLKLAAIFAPGL
HCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCHH
IASTIGSGNLSVAFFALSVVPALAAVTVHFLGIETKGRVLEELEV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure 
TTADSAGQSAAAARSGPLTRGNIVARIERMPGNAMHIRARLLIGLATFFDGFDVIAIAA
CCCCCCCCHHHHHCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH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HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]