Click here to switch to the map view.

The map label for this gene is pobB [H]

Identifier: 116694690

GI number: 116694690

Start: 833172

End: 834128

Strand: Direct

Name: pobB [H]

Synonym: H16_B0739

Alternate gene names: 116694690

Gene position: 833172-834128 (Clockwise)

Preceding gene: 116694689

Following gene: 116694691

Centisome position: 28.61

GC content: 68.44

Gene sequence:

>957_bases
ATGAGTGCCCACCAGTCCCTGACCCTGCGCGTCCACGCCATGCGCTATGAAGCGCGCGGCGTGGTCAGCATCGAACTGCA
AGATCCCGAAGGGAAGACCCTGCCCGAGTACAGCCCGGGCGCCCATATCGACCTGCACCTGGGCAACGGCCTGGTGCGCA
GCTACTCGCTGTGCGGCGCGCCCGAAGCGCGCCGGCGCTATACCGTGGGCGTGCTGCTGGACCGCGGCAGCCGCGGCGGT
TCGCGCTACGTGCATGAGCAGCTGCGCGTGGGCGCCACGCTGACCGTGGGGGCGCCGCGCAACAACTTCGAGCTGGACGA
AAGCGCCGCGCACACCGTGCTGGTCGCCGGCGGCATCGGCGTCACGCCGATCGTCTGCATGGCGCGCCGCCTGGCCGAGC
TGGGCAGGTCGTTCACGCTGATCTACTGCGCCCGTTCGCGTGCCGAGGCCGCATTCGTCGAACAGCTGTCGGCCCATGGC
GATGCCGTGCACTTTCACTTCGACGACGAGGCCGGCGTGCCGCCGGACCTGAACGCGATGCTGGCCGGCCAGGAGGTGCA
GACGCACTTCTACTGCTGCGGCCCCGGTCCGATGCTGAAGGCGTTCGAGGCTGCCTGCGAAGCGCATGGCTACCCGAACG
TGCATATCGAGCGCTTTGCCGCCGACCCCTCGACCGAGGCGGTGCAGGAGGGCGAGTACACCGTGTCGCTGTCGCGCACC
GGCACCACCGTCAAGGTGCCGTCCGGCAAGTCGCTGCTGGACGCACTGCTCGATGCCGGCGTGCAGATGGACTACAGCTG
CCGCGAAGGCGTGTGCGGCTCGTGCGAGACCGCGGTGCTGGAAGGTTGCCCCGATCATCGCGACAGCGTGCTCAGCAACA
GCGAGCGCGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAA

Upstream 100 bases:

>100_bases
GCATCGACGGCAACACCCGCCGCCAGAAGAACGCGGGCGGACCGGCAGGCAAGTTCCTGACCGAGAAGCGGTAAGTCAGC
AGCAATCGAAGGAAGCAGCA

Downstream 100 bases:

>100_bases
TTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGGGAGAGGGGCGGGAGAGAGGGCCAGCGCACGCCGTAGCCGATGCGC
TGTCGAATCCCGACTGCCTC

Product: flavodoxin reductase (ferredoxin-NADPH reductase) family protein 1

Products: NA

Alternate protein names: 4-carboxydiphenyl ether; phenoxybenzoate dioxygenase subunit beta [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSAHQSLTLRVHAMRYEARGVVSIELQDPEGKTLPEYSPGAHIDLHLGNGLVRSYSLCGAPEARRRYTVGVLLDRGSRGG
SRYVHEQLRVGATLTVGAPRNNFELDESAAHTVLVAGGIGVTPIVCMARRLAELGRSFTLIYCARSRAEAAFVEQLSAHG
DAVHFHFDDEAGVPPDLNAMLAGQEVQTHFYCCGPGPMLKAFEAACEAHGYPNVHIERFAADPSTEAVQEGEYTVSLSRT
GTTVKVPSGKSLLDALLDAGVQMDYSCREGVCGSCETAVLEGCPDHRDSVLSNSERASNKTMMVCVSGCKGSKLVLDL

Sequences:

>Translated_318_residues
MSAHQSLTLRVHAMRYEARGVVSIELQDPEGKTLPEYSPGAHIDLHLGNGLVRSYSLCGAPEARRRYTVGVLLDRGSRGG
SRYVHEQLRVGATLTVGAPRNNFELDESAAHTVLVAGGIGVTPIVCMARRLAELGRSFTLIYCARSRAEAAFVEQLSAHG
DAVHFHFDDEAGVPPDLNAMLAGQEVQTHFYCCGPGPMLKAFEAACEAHGYPNVHIERFAADPSTEAVQEGEYTVSLSRT
GTTVKVPSGKSLLDALLDAGVQMDYSCREGVCGSCETAVLEGCPDHRDSVLSNSERASNKTMMVCVSGCKGSKLVLDL
>Mature_317_residues
SAHQSLTLRVHAMRYEARGVVSIELQDPEGKTLPEYSPGAHIDLHLGNGLVRSYSLCGAPEARRRYTVGVLLDRGSRGGS
RYVHEQLRVGATLTVGAPRNNFELDESAAHTVLVAGGIGVTPIVCMARRLAELGRSFTLIYCARSRAEAAFVEQLSAHGD
AVHFHFDDEAGVPPDLNAMLAGQEVQTHFYCCGPGPMLKAFEAACEAHGYPNVHIERFAADPSTEAVQEGEYTVSLSRTG
TTVKVPSGKSLLDALLDAGVQMDYSCREGVCGSCETAVLEGCPDHRDSVLSNSERASNKTMMVCVSGCKGSKLVLDL

Specific function: Degrades exclusively diarylether compounds having carboxyl groups in the 3- or 4-position. Yields a hemiacetal that spontaneously hydrolyzes to phenol and protocatechuate [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=326, Percent_Identity=36.1963190184049, Blast_Score=197, Evalue=8e-52,
Organism=Escherichia coli, GI1787658, Length=326, Percent_Identity=29.1411042944785, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787098, Length=248, Percent_Identity=28.6290322580645, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34081; Mature: 33950

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHQSLTLRVHAMRYEARGVVSIELQDPEGKTLPEYSPGAHIDLHLGNGLVRSYSLCGA
CCCCCEEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCC
PEARRRYTVGVLLDRGSRGGSRYVHEQLRVGATLTVGAPRNNFELDESAAHTVLVAGGIG
CHHHHEEEEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEECCCC
VTPIVCMARRLAELGRSFTLIYCARSRAEAAFVEQLSAHGDAVHFHFDDEAGVPPDLNAM
HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCE
LAGQEVQTHFYCCGPGPMLKAFEAACEAHGYPNVHIERFAADPSTEAVQEGEYTVSLSRT
ECCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCEEEEEECC
GTTVKVPSGKSLLDALLDAGVQMDYSCREGVCGSCETAVLEGCPDHRDSVLSNSERASNK
CCEEECCCCHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCC
TMMVCVSGCKGSKLVLDL
EEEEEEECCCCCEEEEEC
>Mature Secondary Structure 
SAHQSLTLRVHAMRYEARGVVSIELQDPEGKTLPEYSPGAHIDLHLGNGLVRSYSLCGA
CCCCEEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCC
PEARRRYTVGVLLDRGSRGGSRYVHEQLRVGATLTVGAPRNNFELDESAAHTVLVAGGIG
CHHHHEEEEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEECCCC
VTPIVCMARRLAELGRSFTLIYCARSRAEAAFVEQLSAHGDAVHFHFDDEAGVPPDLNAM
HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCE
LAGQEVQTHFYCCGPGPMLKAFEAACEAHGYPNVHIERFAADPSTEAVQEGEYTVSLSRT
ECCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCEEEEEECC
GTTVKVPSGKSLLDALLDAGVQMDYSCREGVCGSCETAVLEGCPDHRDSVLSNSERASNK
CCEEECCCCHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCC
TMMVCVSGCKGSKLVLDL
EEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7710319 [H]