| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694683
Identifier: 116694683
GI number: 116694683
Start: 825868
End: 826404
Strand: Direct
Name: 116694683
Synonym: H16_B0732
Alternate gene names: NA
Gene position: 825868-826404 (Clockwise)
Preceding gene: 116694682
Following gene: 116694684
Centisome position: 28.36
GC content: 62.94
Gene sequence:
>537_bases ATGAGCGATCTTTCTCAACCGCAAAACATCAAGCGTTCCTGGGACCAGCCGGAGAACGCTTCGTTCGACCAATGGATGGA AAGCCGCGTGGCGCGCTTCTCCACGCGCAAGTACGACTGGGACGCGCTGAAGTTCCAGGCCGACTACGACCCCAAGTACC GCCGCGCGCAGATGCGCTACCTGGGCACCGGCGGCACCGGCGTGGCCGCCGACACCAACACCGTGCCGAGCGAGCATTTC ACCTTCTCCACCATGATCATCCCGGCCGGCCATGAAGGCCCGTCGCATATCCACACCGACGTGGAAGAGGTGTTCTTCAT CCTGCGCGGCAAGGTCAAGCTGATCTTGGAAAAGGACGGCGAGCGCTACGAGACCATCCTGACCGACCGCGACCTGGTCT CGGTGCCGCCGGGCGTCTACCGCGAGGAAATCAACATCGGCGAGGAAGACGCGCTGATGTGCGTGATGCTGGGCGCGAAG AAGCCGATCACGCCGACCTACCCGCCCGAGCATCCGCTGACGAAGATCAAGCGCTGA
Upstream 100 bases:
>100_bases TCCGACCTCGCCCGTTTCGTGACCGGCCAGACGCTGGCGGTCAACGGCGGCTTTGTCATGCATTGATCCAACCGATCCAC TGAAAACAGAAGGAATCCAA
Downstream 100 bases:
>100_bases TGCCGGCGAACGTCCGTCAGCACGCATCCACCGAAGCCATGAGCAGCAACCCCATCCCGGCCACGTCCGCCGCCAGCGAA ACCCCGGACAAGTACATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin Region; Cupin Domain-Containing Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSDLSQPQNIKRSWDQPENASFDQWMESRVARFSTRKYDWDALKFQADYDPKYRRAQMRYLGTGGTGVAADTNTVPSEHF TFSTMIIPAGHEGPSHIHTDVEEVFFILRGKVKLILEKDGERYETILTDRDLVSVPPGVYREEINIGEEDALMCVMLGAK KPITPTYPPEHPLTKIKR
Sequences:
>Translated_178_residues MSDLSQPQNIKRSWDQPENASFDQWMESRVARFSTRKYDWDALKFQADYDPKYRRAQMRYLGTGGTGVAADTNTVPSEHF TFSTMIIPAGHEGPSHIHTDVEEVFFILRGKVKLILEKDGERYETILTDRDLVSVPPGVYREEINIGEEDALMCVMLGAK KPITPTYPPEHPLTKIKR >Mature_177_residues SDLSQPQNIKRSWDQPENASFDQWMESRVARFSTRKYDWDALKFQADYDPKYRRAQMRYLGTGGTGVAADTNTVPSEHFT FSTMIIPAGHEGPSHIHTDVEEVFFILRGKVKLILEKDGERYETILTDRDLVSVPPGVYREEINIGEEDALMCVMLGAKK PITPTYPPEHPLTKIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20405; Mature: 20274
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSQPQNIKRSWDQPENASFDQWMESRVARFSTRKYDWDALKFQADYDPKYRRAQMRY CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHEE LGTGGTGVAADTNTVPSEHFTFSTMIIPAGHEGPSHIHTDVEEVFFILRGKVKLILEKDG ECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHCHHHHHHHHCCCEEEEEECCC ERYETILTDRDLVSVPPGVYREEINIGEEDALMCVMLGAKKPITPTYPPEHPLTKIKR CCEEHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure SDLSQPQNIKRSWDQPENASFDQWMESRVARFSTRKYDWDALKFQADYDPKYRRAQMRY CCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHEE LGTGGTGVAADTNTVPSEHFTFSTMIIPAGHEGPSHIHTDVEEVFFILRGKVKLILEKDG ECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHCHHHHHHHHCCCEEEEEECCC ERYETILTDRDLVSVPPGVYREEINIGEEDALMCVMLGAKKPITPTYPPEHPLTKIKR CCEEHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA