| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694621
Identifier: 116694621
GI number: 116694621
Start: 744432
End: 746873
Strand: Direct
Name: 116694621
Synonym: H16_B0670
Alternate gene names: NA
Gene position: 744432-746873 (Clockwise)
Preceding gene: 116694620
Following gene: 116694622
Centisome position: 25.56
GC content: 67.94
Gene sequence:
>2442_bases ATGACCCGCCCCCATTCCTCCGGCCGCCTGGGCCGCCTTGTCGATGCCTGCGCCAGCCTGCTGATGCACCGGCGCCGCCT GCTGCTGGTGCTGTGCCTGGCCGTGACCGTGGCGCTGGGCGCCTCGGCCACGCGGCTGCGGCTCGATCCCGGCTTCAACA AGATGATCCCGCTGCAGCACCCGTTCATGCAGGTGTTCACCAAGTACGCGAGCACCTTTTCCGGTGCCAATACGGTGCTG CTGAGCCTGCGCTGGAAGGGCGACGGCGATATCTACAACGCGGCCTTCATGGACAAGCTGCGCCGCGCCACCGATGACGT GTTCTTCATCCCCGGCGTGGACCGCTCGCGCGTGTTCTCGCTGTTCACGCCCAATGTGCGCTACACCGAGGTGACGGAGG CGGGCTTTCGCGGCGACGTGGTGGTGCCGGGGCGCTTCTCCGGCACGCCGGCCGAGCTCGACAAGGTGCGCCGCAACGTG GCGCGCTCCGGCCAGATCGGCCGCCTGGTCAGCAACGACCTGAGGTCCGCGCTGATCCGCGCGGAATTGCGCGAGACCGA TCCGGCCACCGGCAAGACCATCGACTACGGTTCGGTCGCGCGCCAGCTGGAGAAGATCCGCGGGGACTTCAGCGGCACCG ACGTCGAGGTCAATATCGTCGGCTTTGCCAAGCTGGTGGGCGATGTGGAAGAGGGCATCGCCGGCGTGATGGGCTTCTTC GCGCTGGCCTTCGCCGTGACCGCGCTGCTGCTGTGGCTGTACACGCGCTCGCTGCGTATCACGCTGCTGTCGCTGGCGGT GGCGCTGCTGCCCGTGGCCTGGCTGCTGGGCCTGCTGCCGCTGCTGGGCTACGGCATCGATCCGATGTCGATCCTGGTGC CGTTCCTGATCTTTTCGATCGGGGTCTCGCACGCGGTGCAGATGACCAATGCCTGGAAGCAAGAGGTGGTGCAGGGACAT GGTGCGCTGGACAGCGCCAGCGCGGCCTTCCGCAAGCTGTTCATCCCCGGCACGGTCGCGCTGCTGACCAACGCGCTCGG GTTCATGGTCATCATGCGCATCGAGATCGACATCGTGCGCGAGCTTGGCATCACCGCCTGCCTGGGCGTGCTGCTGATGA TCGTGACCAACAAGGTGTTCCTGCCGATCCTGCTGTCGTACACGCGGCTGGAGCCGTCGGCGCTGGCATCGGCGCAGGCC CGGCGCGCGCACGGAACCGGCGGGCTGTGGCAGAAGTTCGGCGCGCTGGCGCGTCCGGGCCCGGCGCTGGGCGTGTTCGT TGCCGCGCTCGCGTTGCTGGCGGCCGGCGCCATCGATTCGCGCGGCCTCAAGATTGGCGATGTCGGCAGCGGCGCACCGG AACTGCGCGCGGATTCGCGCTACAACCGCGACAGCGCCAGCATCGTGAGCCAGTACAACATCGGCTCGGATGCGCTGACC GTGGTGGTGGAACCCACCGGCTTCGACGACGGCTGCCTGCACTACCCGGTGATGAGTGCGGTGGAACGCTTCGAGATGCA TATGCGCGGCGTGTCCGGCGTGCAGTCGGTGGTGAGCGTGTCGTCGCTGGCCAAGGTGGTGATCGGCGCCTACAACGAGG GCAACCCGCGCTGGGAGGCGCTGCCGCGCAGCAGCGAGGGCCTGAGCCAGGGCGCCAAGGCCTTCGACCCGGACAACGGC ATGAATACCTCGAACTGCCAGGCCATCCAGGTGCTGATCTACACCGCCAACCATGAGGGCGCCACCATCGCCCACATCAT CCGCGAGATCCGCCGCTTCACCGCCGCCGACAAGACCCCCAACGTGGCGTTCCGCCTGGGCGGGGGCAATATCGGCGTGA TGGCGGCCACCAATGAGGCCGTGGAAGAAGCCGAAGTGACCATGCTGCTGTCGATCTTCGGTGCGATCACGCTGCTATGC CTGCTGACGTTCCGCTCGTGGCGCGCGGTGCTGTGCATCATCGTGCCGCTGACGCTGGTGTCGGTGCTGTGCAATGCGCT GATGGCGCGGCTTGGCATCGGGCTGAAGGTGTCGACGCTGCCGGTCATCACGCTGGGCGTGGGCGTCGGCGTGGACTACG GCATCTACCTGTATGAGCGCATCCAGCACCAGATCCGCGAGGAAGGGCAGGCCCTGCCGCAGGCCTTTGCCGAGGCCATG CGCCAGCGCGGTTCGGCGGCGCTGTTCACGGCGCTGACGATGTGCATCGGGGTGGGCACCTGGGCCTTTGCCGCGCTCAA GTTCCAGGCCGACATGGGTATCCTGCTGGCCTTCATGTTCCTGGTGAACCTGTTCGGCGCGGTGTCGCTGCTGCCGGCGC TGGCTGCGTGGCTGGGGGTGGAGGAAGAAGAGCGTGCGCGCGTGGCCGCCGGTGGTGCCGGTGGCGCCGCGCGCGGCGAG ACGGTGCCGCCGGCGCACGCCCTGAAATCCGACGCGGTGTAA
Upstream 100 bases:
>100_bases GGCAAGGACAAGCTGGCGCTGGGCGGCAATGGCGGCCTTGCCGGCGCCACGCTCGCCGCCAACCCCCGCTGACCCTGGCT TACCGAATGCGAGAACGATC
Downstream 100 bases:
>100_bases GGCCGATGACCCGGAGAGACAGCATGCACGATCACCAGGCTTACGCGGCGGCGGCATTCACACCGGTCCGCATCGGCCCG CTCACGCTGCGCAATCGCAT
Product: RND superfamily exporter
Products: NA
Alternate protein names: RND Superfamily Exporter; Exporter Of RND Superfamily Protein; Patched Family Protein; Transporter Protein; Exporter Of RND Superfamily; RND Family Multidrug Efflux Transporter; RND Superfamily Transporter; Exporters Of RND Superfamily; RND Family Transporter; RND Family Efflux Transporter
Number of amino acids: Translated: 813; Mature: 812
Protein sequence:
>813_residues MTRPHSSGRLGRLVDACASLLMHRRRLLLVLCLAVTVALGASATRLRLDPGFNKMIPLQHPFMQVFTKYASTFSGANTVL LSLRWKGDGDIYNAAFMDKLRRATDDVFFIPGVDRSRVFSLFTPNVRYTEVTEAGFRGDVVVPGRFSGTPAELDKVRRNV ARSGQIGRLVSNDLRSALIRAELRETDPATGKTIDYGSVARQLEKIRGDFSGTDVEVNIVGFAKLVGDVEEGIAGVMGFF ALAFAVTALLLWLYTRSLRITLLSLAVALLPVAWLLGLLPLLGYGIDPMSILVPFLIFSIGVSHAVQMTNAWKQEVVQGH GALDSASAAFRKLFIPGTVALLTNALGFMVIMRIEIDIVRELGITACLGVLLMIVTNKVFLPILLSYTRLEPSALASAQA RRAHGTGGLWQKFGALARPGPALGVFVAALALLAAGAIDSRGLKIGDVGSGAPELRADSRYNRDSASIVSQYNIGSDALT VVVEPTGFDDGCLHYPVMSAVERFEMHMRGVSGVQSVVSVSSLAKVVIGAYNEGNPRWEALPRSSEGLSQGAKAFDPDNG MNTSNCQAIQVLIYTANHEGATIAHIIREIRRFTAADKTPNVAFRLGGGNIGVMAATNEAVEEAEVTMLLSIFGAITLLC LLTFRSWRAVLCIIVPLTLVSVLCNALMARLGIGLKVSTLPVITLGVGVGVDYGIYLYERIQHQIREEGQALPQAFAEAM RQRGSAALFTALTMCIGVGTWAFAALKFQADMGILLAFMFLVNLFGAVSLLPALAAWLGVEEEERARVAAGGAGGAARGE TVPPAHALKSDAV
Sequences:
>Translated_813_residues MTRPHSSGRLGRLVDACASLLMHRRRLLLVLCLAVTVALGASATRLRLDPGFNKMIPLQHPFMQVFTKYASTFSGANTVL LSLRWKGDGDIYNAAFMDKLRRATDDVFFIPGVDRSRVFSLFTPNVRYTEVTEAGFRGDVVVPGRFSGTPAELDKVRRNV ARSGQIGRLVSNDLRSALIRAELRETDPATGKTIDYGSVARQLEKIRGDFSGTDVEVNIVGFAKLVGDVEEGIAGVMGFF ALAFAVTALLLWLYTRSLRITLLSLAVALLPVAWLLGLLPLLGYGIDPMSILVPFLIFSIGVSHAVQMTNAWKQEVVQGH GALDSASAAFRKLFIPGTVALLTNALGFMVIMRIEIDIVRELGITACLGVLLMIVTNKVFLPILLSYTRLEPSALASAQA RRAHGTGGLWQKFGALARPGPALGVFVAALALLAAGAIDSRGLKIGDVGSGAPELRADSRYNRDSASIVSQYNIGSDALT VVVEPTGFDDGCLHYPVMSAVERFEMHMRGVSGVQSVVSVSSLAKVVIGAYNEGNPRWEALPRSSEGLSQGAKAFDPDNG MNTSNCQAIQVLIYTANHEGATIAHIIREIRRFTAADKTPNVAFRLGGGNIGVMAATNEAVEEAEVTMLLSIFGAITLLC LLTFRSWRAVLCIIVPLTLVSVLCNALMARLGIGLKVSTLPVITLGVGVGVDYGIYLYERIQHQIREEGQALPQAFAEAM RQRGSAALFTALTMCIGVGTWAFAALKFQADMGILLAFMFLVNLFGAVSLLPALAAWLGVEEEERARVAAGGAGGAARGE TVPPAHALKSDAV >Mature_812_residues TRPHSSGRLGRLVDACASLLMHRRRLLLVLCLAVTVALGASATRLRLDPGFNKMIPLQHPFMQVFTKYASTFSGANTVLL SLRWKGDGDIYNAAFMDKLRRATDDVFFIPGVDRSRVFSLFTPNVRYTEVTEAGFRGDVVVPGRFSGTPAELDKVRRNVA RSGQIGRLVSNDLRSALIRAELRETDPATGKTIDYGSVARQLEKIRGDFSGTDVEVNIVGFAKLVGDVEEGIAGVMGFFA LAFAVTALLLWLYTRSLRITLLSLAVALLPVAWLLGLLPLLGYGIDPMSILVPFLIFSIGVSHAVQMTNAWKQEVVQGHG ALDSASAAFRKLFIPGTVALLTNALGFMVIMRIEIDIVRELGITACLGVLLMIVTNKVFLPILLSYTRLEPSALASAQAR RAHGTGGLWQKFGALARPGPALGVFVAALALLAAGAIDSRGLKIGDVGSGAPELRADSRYNRDSASIVSQYNIGSDALTV VVEPTGFDDGCLHYPVMSAVERFEMHMRGVSGVQSVVSVSSLAKVVIGAYNEGNPRWEALPRSSEGLSQGAKAFDPDNGM NTSNCQAIQVLIYTANHEGATIAHIIREIRRFTAADKTPNVAFRLGGGNIGVMAATNEAVEEAEVTMLLSIFGAITLLCL LTFRSWRAVLCIIVPLTLVSVLCNALMARLGIGLKVSTLPVITLGVGVGVDYGIYLYERIQHQIREEGQALPQAFAEAMR QRGSAALFTALTMCIGVGTWAFAALKFQADMGILLAFMFLVNLFGAVSLLPALAAWLGVEEEERARVAAGGAGGAARGET VPPAHALKSDAV
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87019; Mature: 86887
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPHSSGRLGRLVDACASLLMHRRRLLLVLCLAVTVALGASATRLRLDPGFNKMIPLQH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC PFMQVFTKYASTFSGANTVLLSLRWKGDGDIYNAAFMDKLRRATDDVFFIPGVDRSRVFS HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHEEE LFTPNVRYTEVTEAGFRGDVVVPGRFSGTPAELDKVRRNVARSGQIGRLVSNDLRSALIR EECCCCCEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AELRETDPATGKTIDYGSVARQLEKIRGDFSGTDVEVNIVGFAKLVGDVEEGIAGVMGFF HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH ALAFAVTALLLWLYTRSLRITLLSLAVALLPVAWLLGLLPLLGYGIDPMSILVPFLIFSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVSHAVQMTNAWKQEVVQGHGALDSASAAFRKLFIPGTVALLTNALGFMVIMRIEIDIVR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ELGITACLGVLLMIVTNKVFLPILLSYTRLEPSALASAQARRAHGTGGLWQKFGALARPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCC PALGVFVAALALLAAGAIDSRGLKIGDVGSGAPELRADSRYNRDSASIVSQYNIGSDALT HHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE VVVEPTGFDDGCLHYPVMSAVERFEMHMRGVSGVQSVVSVSSLAKVVIGAYNEGNPRWEA EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHC LPRSSEGLSQGAKAFDPDNGMNTSNCQAIQVLIYTANHEGATIAHIIREIRRFTAADKTP CCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC NVAFRLGGGNIGVMAATNEAVEEAEVTMLLSIFGAITLLCLLTFRSWRAVLCIIVPLTLV CEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVLCNALMARLGIGLKVSTLPVITLGVGVGVDYGIYLYERIQHQIREEGQALPQAFAEAM HHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQRGSAALFTALTMCIGVGTWAFAALKFQADMGILLAFMFLVNLFGAVSLLPALAAWLGV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EEEERARVAAGGAGGAARGETVPPAHALKSDAV CHHHHHHEECCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure TRPHSSGRLGRLVDACASLLMHRRRLLLVLCLAVTVALGASATRLRLDPGFNKMIPLQH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC PFMQVFTKYASTFSGANTVLLSLRWKGDGDIYNAAFMDKLRRATDDVFFIPGVDRSRVFS HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHEEE LFTPNVRYTEVTEAGFRGDVVVPGRFSGTPAELDKVRRNVARSGQIGRLVSNDLRSALIR EECCCCCEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AELRETDPATGKTIDYGSVARQLEKIRGDFSGTDVEVNIVGFAKLVGDVEEGIAGVMGFF HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH ALAFAVTALLLWLYTRSLRITLLSLAVALLPVAWLLGLLPLLGYGIDPMSILVPFLIFSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVSHAVQMTNAWKQEVVQGHGALDSASAAFRKLFIPGTVALLTNALGFMVIMRIEIDIVR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ELGITACLGVLLMIVTNKVFLPILLSYTRLEPSALASAQARRAHGTGGLWQKFGALARPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCC PALGVFVAALALLAAGAIDSRGLKIGDVGSGAPELRADSRYNRDSASIVSQYNIGSDALT HHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE VVVEPTGFDDGCLHYPVMSAVERFEMHMRGVSGVQSVVSVSSLAKVVIGAYNEGNPRWEA EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHC LPRSSEGLSQGAKAFDPDNGMNTSNCQAIQVLIYTANHEGATIAHIIREIRRFTAADKTP CCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC NVAFRLGGGNIGVMAATNEAVEEAEVTMLLSIFGAITLLCLLTFRSWRAVLCIIVPLTLV CEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVLCNALMARLGIGLKVSTLPVITLGVGVGVDYGIYLYERIQHQIREEGQALPQAFAEAM HHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQRGSAALFTALTMCIGVGTWAFAALKFQADMGILLAFMFLVNLFGAVSLLPALAAWLGV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EEEERARVAAGGAGGAARGETVPPAHALKSDAV CHHHHHHEECCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA