| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694466
Identifier: 116694466
GI number: 116694466
Start: 580585
End: 581439
Strand: Direct
Name: 116694466
Synonym: H16_B0515
Alternate gene names: NA
Gene position: 580585-581439 (Clockwise)
Preceding gene: 116694462
Following gene: 116694468
Centisome position: 19.93
GC content: 69.94
Gene sequence:
>855_bases ATGAGCAAGCGCGCTTTGCCGCTGGTGGATACCCACTTCCACGTCTTCGATGCCGGAGCGGCCGTGCCATCGGCCCGCTA CCGGCCGCCCTATGCCGCTGACCTGAAGGACTGGCACGCCCGGCTTGCCGGATTGGGGGACATGTATGGGGTGGTGGTGC AGACCAGCTTTCTCGGCACCGACAATGCGGCGCTGCTGGCCGCGCTGCAGGCCATGCCCGGGCGCTTGCGCGGCGTCGCG GTGGTCGGCCCTGAGGTAACGGATGCGGAACTGGCTACGTTGCACGCGGCCGGCGTGCGGGGCATCCGCCTGAACCTGTA CGGCGATCCGGACTGGCAGCGCATCGCCACCGTGCCGTGGCGCGGGCTGTTCTCCAGGATCGCCGGGCTCGGCTGGCATG TCGAGCTCCATACCCGCAACGGCGATGGCGCCATGGTGCTGGCACAGCTTGACGCGGCCCTTGGCGATACCGGCGCGCCG GTCGTGCTTGACCACTTTGGCCGGCCCGGCCCCGCAGGAACCGCGGACGCGATCTTTGACGTGGCCTCTGCCGTGCGCGC GCGCCGCCAGGTCTGGGTGAAGATCAGCGCGCCGTACCGACTTGCATCCCCTCAGGACTGGCACGGGCTTGCGCAGAGAT GGCGCGAAGTCGTGGGCGATGACCGCTTGCTGTGGGGCAGCGACTGGCCATGGACCAACCACGAGGCGCCGGCTCGGGTC GACGAGTGCCGGATGCTTGCCGCATGGCCGGGGCAAGGGGCGCCCGGTGACAGCGAAGCGGCCGGAGTGGCCTTGTCCGC TGCGCTCCGGTGGCGCAACGCCGCAGCGCTGTACGGGTTTGCGGTGAAGGGATAG
Upstream 100 bases:
>100_bases GATGTCGATGTCATCTAGAGGACTAGAATACTGACGCGGATACGGATGCCATATCCGGATATACCCGCGCCACTGAGCCG CGCCACGGAGGGGCTGACTG
Downstream 100 bases:
>100_bases CGGGCGGCTTGCGCCGCCGGCTTCAATCCAGCGCCAGCACCCCGGGAATCGCCTCCACCAGCAAATCGATCGTCACCCTC AGCTTGTGCGGCAGGAAACG
Product: metal-dependent hydrolase of the TIM-barrel fold
Products: NA
Alternate protein names: Amidohydrolase; 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Dicarboxylic Acid Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSKRALPLVDTHFHVFDAGAAVPSARYRPPYAADLKDWHARLAGLGDMYGVVVQTSFLGTDNAALLAALQAMPGRLRGVA VVGPEVTDAELATLHAAGVRGIRLNLYGDPDWQRIATVPWRGLFSRIAGLGWHVELHTRNGDGAMVLAQLDAALGDTGAP VVLDHFGRPGPAGTADAIFDVASAVRARRQVWVKISAPYRLASPQDWHGLAQRWREVVGDDRLLWGSDWPWTNHEAPARV DECRMLAAWPGQGAPGDSEAAGVALSAALRWRNAAALYGFAVKG
Sequences:
>Translated_284_residues MSKRALPLVDTHFHVFDAGAAVPSARYRPPYAADLKDWHARLAGLGDMYGVVVQTSFLGTDNAALLAALQAMPGRLRGVA VVGPEVTDAELATLHAAGVRGIRLNLYGDPDWQRIATVPWRGLFSRIAGLGWHVELHTRNGDGAMVLAQLDAALGDTGAP VVLDHFGRPGPAGTADAIFDVASAVRARRQVWVKISAPYRLASPQDWHGLAQRWREVVGDDRLLWGSDWPWTNHEAPARV DECRMLAAWPGQGAPGDSEAAGVALSAALRWRNAAALYGFAVKG >Mature_283_residues SKRALPLVDTHFHVFDAGAAVPSARYRPPYAADLKDWHARLAGLGDMYGVVVQTSFLGTDNAALLAALQAMPGRLRGVAV VGPEVTDAELATLHAAGVRGIRLNLYGDPDWQRIATVPWRGLFSRIAGLGWHVELHTRNGDGAMVLAQLDAALGDTGAPV VLDHFGRPGPAGTADAIFDVASAVRARRQVWVKISAPYRLASPQDWHGLAQRWREVVGDDRLLWGSDWPWTNHEAPARVD ECRMLAAWPGQGAPGDSEAAGVALSAALRWRNAAALYGFAVKG
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30486; Mature: 30355
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRALPLVDTHFHVFDAGAAVPSARYRPPYAADLKDWHARLAGLGDMYGVVVQTSFLGT CCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEEEECCC DNAALLAALQAMPGRLRGVAVVGPEVTDAELATLHAAGVRGIRLNLYGDPDWQRIATVPW CCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEECCCH RGLFSRIAGLGWHVELHTRNGDGAMVLAQLDAALGDTGAPVVLDHFGRPGPAGTADAIFD HHHHHHHHCCCEEEEEEEECCCCEEEEEEEHHHHCCCCCCEEEECCCCCCCCCHHHHHHH VASAVRARRQVWVKISAPYRLASPQDWHGLAQRWREVVGDDRLLWGSDWPWTNHEAPARV HHHHHHHHHEEEEEEECCEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCH DECRMLAAWPGQGAPGDSEAAGVALSAALRWRNAAALYGFAVKG HHCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC >Mature Secondary Structure SKRALPLVDTHFHVFDAGAAVPSARYRPPYAADLKDWHARLAGLGDMYGVVVQTSFLGT CCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEEEECCC DNAALLAALQAMPGRLRGVAVVGPEVTDAELATLHAAGVRGIRLNLYGDPDWQRIATVPW CCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEECCCH RGLFSRIAGLGWHVELHTRNGDGAMVLAQLDAALGDTGAPVVLDHFGRPGPAGTADAIFD HHHHHHHHCCCEEEEEEEECCCCEEEEEEEHHHHCCCCCCEEEECCCCCCCCCHHHHHHH VASAVRARRQVWVKISAPYRLASPQDWHGLAQRWREVVGDDRLLWGSDWPWTNHEAPARV HHHHHHHHHEEEEEEECCEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCH DECRMLAAWPGQGAPGDSEAAGVALSAALRWRNAAALYGFAVKG HHCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA