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The map label for this gene is ygbK [C]

Identifier: 116694272

GI number: 116694272

Start: 355680

End: 356927

Strand: Direct

Name: ygbK [C]

Synonym: H16_B0318

Alternate gene names: 116694272

Gene position: 355680-356927 (Clockwise)

Preceding gene: 116694271

Following gene: 116694273

Centisome position: 12.21

GC content: 72.52

Gene sequence:

>1248_bases
ATGAGCTGGCTTATCATCGCCGACGACCTGTCAGGCGCTGCAGACTGCGCGATCGGCTACGCCATGTCTGGCGCCCGGAC
CGTTGTAACGCTGGAGGCGGCGCCTGCGGGCGCGGACCTGTCGCAGGCCGACGTAGTGGCTTGCGACGTCGACAGCCGCC
GCATGGCGCCCCAGGAGGCGGCGGCGCGCAATCTCGAAGCCTGGCATCGCGGCCAGGGCGCCAGCCGGCGGCTGTACAAG
AAGATCGATTCCACGTTGCGAGGCAACTGGGCTGCCGAAACCGCGGCGCTGGCGCCGCTGGCCGGCCTTGCCATCGTCGC
GCCGGCCTTTCCGGCCACTGGCCGCACCACGGCCGGCGGCTGCATGTTCGTGAACGGCCAGCCGCTGGAAGACTCCGACA
TCTGGCGCCTGGAAGCGCTTACCGGACGTGCCGACCTTGTCGCGCTGCTGGCCGCGCGGGGGCTGCGGGCGACCCTGTTG
CCGCTGGACACGGTGCGTGCGGGTGACGCGACCCTGCGGCTAACCATCGCCGGACTGGCGCGCGAAGGTGTGCGGGCGGT
AGTCTGCGATGCGCAGACGGAGCAAGACCTGGCGGCGCTCGCCGCGGCCACGGCGCAGCTCGACGTCCCCGCATTCTGGG
TCGGCTCGGGCGGCCTGGCTCGTGCGCTGGCTGCACCATGCCTGTTCGAGGGCGGTGCGCCGCAGCCGCTGCCTGCCCCT
GAGGGCGGCCCGGTCTTGACGCTGGTCGGCAGCCTCTCGGGCATCTCCGGGCGACAGGCCGCTTGCCTGCGCGAACGCAC
CGGGATGCAGTCGCTGGTGGTTCCGCCGCGGATCTTGCGTGAAGGCGCGGGCCACGCTGACTGGGACGCCGCGCAGCAAT
CGATCACCGGATGCCTGCGGGCTGGCCGCGACCTGCTGGTCAGCATTGGTCGCGACGACGCGTTCGACCCGGGCGAAGGG
CCGCGCCTGAGCGCCGCGCTGGCGCAATTGTCCCTGCCCGGCTTCCAGCATACGCGCGGCCTGATCGCCACCGGCGGCGA
GACGGCCCGGGCCATGCTCTCGGCGGCCGGCATCGGCGCCCTGATGCTGCGGCGCGAAGTCGAGCCCGGTGTGCCGTTGT
CCGACACCCCTGCGCTGCCCGGCGTGCCCGCGCGCCGCGTTGCTACCAAGGCCGGCGCATTCGGCTCCGAGGCCGCCCTG
TGGCATGCCTGGCAGGCTATGACTGAATCCCGCGCGCCGTCAGCCTGA

Upstream 100 bases:

>100_bases
CCTGCGTGGTGGTCACCGCCGTACTGACGCCATTGGTGACCGCCTGGATTGCCCGCCGCGTGGCGGGCAAGGAGGCCGAG
GCGTTGGTGAGGACCGCCGC

Downstream 100 bases:

>100_bases
CGGCGCGCCGCGCCACACTCGACAAGAGACACATCAATGAGCGACTACCTCCCCGTCATCGGTATCACCATGGGCGATGC
CACAGGCATCGGCCCCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSWLIIADDLSGAADCAIGYAMSGARTVVTLEAAPAGADLSQADVVACDVDSRRMAPQEAAARNLEAWHRGQGASRRLYK
KIDSTLRGNWAAETAALAPLAGLAIVAPAFPATGRTTAGGCMFVNGQPLEDSDIWRLEALTGRADLVALLAARGLRATLL
PLDTVRAGDATLRLTIAGLAREGVRAVVCDAQTEQDLAALAAATAQLDVPAFWVGSGGLARALAAPCLFEGGAPQPLPAP
EGGPVLTLVGSLSGISGRQAACLRERTGMQSLVVPPRILREGAGHADWDAAQQSITGCLRAGRDLLVSIGRDDAFDPGEG
PRLSAALAQLSLPGFQHTRGLIATGGETARAMLSAAGIGALMLRREVEPGVPLSDTPALPGVPARRVATKAGAFGSEAAL
WHAWQAMTESRAPSA

Sequences:

>Translated_415_residues
MSWLIIADDLSGAADCAIGYAMSGARTVVTLEAAPAGADLSQADVVACDVDSRRMAPQEAAARNLEAWHRGQGASRRLYK
KIDSTLRGNWAAETAALAPLAGLAIVAPAFPATGRTTAGGCMFVNGQPLEDSDIWRLEALTGRADLVALLAARGLRATLL
PLDTVRAGDATLRLTIAGLAREGVRAVVCDAQTEQDLAALAAATAQLDVPAFWVGSGGLARALAAPCLFEGGAPQPLPAP
EGGPVLTLVGSLSGISGRQAACLRERTGMQSLVVPPRILREGAGHADWDAAQQSITGCLRAGRDLLVSIGRDDAFDPGEG
PRLSAALAQLSLPGFQHTRGLIATGGETARAMLSAAGIGALMLRREVEPGVPLSDTPALPGVPARRVATKAGAFGSEAAL
WHAWQAMTESRAPSA
>Mature_414_residues
SWLIIADDLSGAADCAIGYAMSGARTVVTLEAAPAGADLSQADVVACDVDSRRMAPQEAAARNLEAWHRGQGASRRLYKK
IDSTLRGNWAAETAALAPLAGLAIVAPAFPATGRTTAGGCMFVNGQPLEDSDIWRLEALTGRADLVALLAARGLRATLLP
LDTVRAGDATLRLTIAGLAREGVRAVVCDAQTEQDLAALAAATAQLDVPAFWVGSGGLARALAAPCLFEGGAPQPLPAPE
GGPVLTLVGSLSGISGRQAACLRERTGMQSLVVPPRILREGAGHADWDAAQQSITGCLRAGRDLLVSIGRDDAFDPGEGP
RLSAALAQLSLPGFQHTRGLIATGGETARAMLSAAGIGALMLRREVEPGVPLSDTPALPGVPARRVATKAGAFGSEAALW
HAWQAMTESRAPSA

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=274, Percent_Identity=31.021897810219, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 42589; Mature: 42458

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLIIADDLSGAADCAIGYAMSGARTVVTLEAAPAGADLSQADVVACDVDSRRMAPQEA
CCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCCCHHCCCHHH
AARNLEAWHRGQGASRRLYKKIDSTLRGNWAAETAALAPLAGLAIVAPAFPATGRTTAGG
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
CMFVNGQPLEDSDIWRLEALTGRADLVALLAARGLRATLLPLDTVRAGDATLRLTIAGLA
EEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEHHH
REGVRAVVCDAQTEQDLAALAAATAQLDVPAFWVGSGGLARALAAPCLFEGGAPQPLPAP
HCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCC
EGGPVLTLVGSLSGISGRQAACLRERTGMQSLVVPPRILREGAGHADWDAAQQSITGCLR
CCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHH
AGRDLLVSIGRDDAFDPGEGPRLSAALAQLSLPGFQHTRGLIATGGETARAMLSAAGIGA
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCEEEECCHHHHHHHHHHCHHH
LMLRREVEPGVPLSDTPALPGVPARRVATKAGAFGSEAALWHAWQAMTESRAPSA
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SWLIIADDLSGAADCAIGYAMSGARTVVTLEAAPAGADLSQADVVACDVDSRRMAPQEA
CEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCCCHHCCCHHH
AARNLEAWHRGQGASRRLYKKIDSTLRGNWAAETAALAPLAGLAIVAPAFPATGRTTAGG
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
CMFVNGQPLEDSDIWRLEALTGRADLVALLAARGLRATLLPLDTVRAGDATLRLTIAGLA
EEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEHHH
REGVRAVVCDAQTEQDLAALAAATAQLDVPAFWVGSGGLARALAAPCLFEGGAPQPLPAP
HCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCC
EGGPVLTLVGSLSGISGRQAACLRERTGMQSLVVPPRILREGAGHADWDAAQQSITGCLR
CCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHH
AGRDLLVSIGRDDAFDPGEGPRLSAALAQLSLPGFQHTRGLIATGGETARAMLSAAGIGA
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCEEEECCHHHHHHHHHHCHHH
LMLRREVEPGVPLSDTPALPGVPARRVATKAGAFGSEAALWHAWQAMTESRAPSA
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]