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The map label for this gene is flhF [H]

Identifier: 116694209

GI number: 116694209

Start: 291133

End: 293463

Strand: Direct

Name: flhF [H]

Synonym: H16_B0254

Alternate gene names: 116694209

Gene position: 291133-293463 (Clockwise)

Preceding gene: 116694208

Following gene: 116694211

Centisome position: 10.0

GC content: 72.84

Gene sequence:

>2331_bases
ATGAGCGTAGCCAAGTTTGTCGCGGCCAACGGCCGCGAAGCCATGCGCCAGGTGCGCGAAGCCATGGGCCCGGACGCCGT
GGTGCTGTCCAACCGCACCGTCGAGGGCGGCGTGGAGATCGTCGCCATGCGCGATGCGGATCTGGGCAGCGTGCAGGCCA
CGGCGCAGGTCTACGTGCCGCCCGCGCCGGTGGCCGAGCCCACCGCCATCGGCGACCTGCGCGGTGAGCTGCAATCGATG
CGCGCAATGCTGGAGCGCCAGCTGGCCGGGATCAGCCCTGCCCAAAGCGCGGTTCCAAGCGCGGCAGCGCACGGCGTGGC
CGCCAGCGACCCGCTGCGCGAATCCCTGTTTGAATGGATGGTCGGCGCCGGCTTCTCCGGGCAGCTGGCGCGCACGCTGC
TGGCGCGGCTGCCGCTGGGCTACGACCGCCCCGCGGCCATGGGCTGGATCCGCACCGAACTGGCCAGCAAGCTGCCGGTG
CTGGGCGATGAGGACAGCCTGTTCGCGCAAGGCGGCGTGCTGGCGCTGGTTGGCCCCACCGGCGTAGGCAAGACCACCAC
CACGGCCAAGCTGGCGGCGCGCTTCGTGCTGCGCCACGGCGCCGACAAGCTGGCGCTGCTGACCACCGACAGCTTCCGTA
TCGGCGCGCACGAACAGCTGCGCATCTACGGCGACATCCTGGGCGTGCCGGTGCATGCGGTAAAGGATGCCGCCGACCTG
CGCTTCGCGCTGGCGGCGATGAAGGACAAGCACCTGGTGATCATCGACACCGTCGGCATGAGCCAGCGCGACCGCAGCCT
GTCGGAACAGATCGCGATGCTGGCCGGCGTGCCGGCGCCGGTGCAGCGCGTGCTGCTGCTCAACGGCGCCAGCCACGGCG
ATACCCTCAATGAAGTGGTGCATGCCTACCGTCATGACGCCGCGCCGGATGGGGGCGGCATCGACGGCTGCATCATCAGC
AAGCTGGATGAGGCCACCCACCTGGGCTCGGTGCTGGACGTGGTGATCCGCCACCGCCTGCCGGTGTTCTACGCCTCCAC
CGGCCAGCGCGTGCCCGAGCACCTTGAGCTGGCCAACAGCACCGCGCTGGTGGAGCGCGCCTTCCTGACGCCGCGCCGCG
GTTCGGTATTTGCCGATGCGGACGCCGCACGCCGGCGCAGCGCCGGCACCGATGACGAGGCCCCCGCGCGTGGCGGTGCC
GACGAGGTGCTGCGCTCGCTGACCGACAGCGCCGACGCGCTGAGCCAGTGCGTGGCGGAACTCAATGGCGCGGGCCTGGG
TCTGGACCTGGCGCGCTCGCTGTGGCAACAGCGCAGCGCCGGCGCCCCGGCCCTGCGCGCGATGTCGCAGCAGGTGCGCG
AAGCGGTCTGCCGCGACGTGACCCGCCAGTGCGAGCAGTACGTGCTGGCCAGCGCCGCCACGCTGCAAGTGGCCGTGCCC
GGCCGCCGCACGCCGCAGCCGATGCAGCACACGCTGTGGCTCGCCGACCGCGACGGCATGCCGCTGGCCGCCACCGTGAC
CCCGACCGGCCGTGCCGGCCAGCCGTTGGGCGAGGCCGAGTCCGATGCCGCCAGCCTGCGCGCCGCCATGAGCGCCGCGC
GCAAGGTGGTCAACCTGATCGATGCCGTACCGACCGCCGCCACGCTGGCACGCTGGCAGCAGGCCGGCGAGCGCTGGGTG
GCCAGCGCGCGCAAGACCGCGCGCGTGGTCAGCGCCGGCGCCGCCTGGAAGCTCGATGCGCTGGCCGACACGCTGACCTT
CCACGCCGTGGGCGAGGACACCGTGCGCGAGCGTGAAGCCGTGCGCTGGCTGGCCAGCGCCGAAGTGCGCGTGCCGGACA
GCCCGGTGCGCGGCAAGGGCACGCCCGAAGGCGGCATCGATGCCTGCCTGGTGGTGGCCCGCCTGGCCGACCGCGCCACC
GGCGAACTGCTGGATACCCGTTACCTGCTGTGCGACCCGGCGCTGGCGCAAGATGCCGCGCAGGTGGCGCGCTGGGCCTT
GTGGACCGACGCAGCCGATGCGCGCCTGCGCACGCTGCGCCACGCCATCGACCACTTCGCCCAGGACGCCGAAAGCGGCC
ACGCCGCCGGCGCCGCGCTGGCCGCACTGCAGTTGGGCCTGGCGGTGCTGCGCCTGGAACACGCGCCGACCGCGGCCGCG
CCCGCCTTCCTCGCGCGCCTGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCAT
GGGCCGCATGCTGGCATTGCTCGACGTGCTGGAATACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGG
TGTTGCAGTGA

Upstream 100 bases:

>100_bases
CGGCGCACCATGCCGCAGCTGAGGGTGCTGTCGCATGCCGAGGTGCCGGACAACCGCAATATCCGCATCACCGCCATGAT
CGGCGCGTGAGGAGTCATAG

Downstream 100 bases:

>100_bases
GCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGCGCCGTATCGCCGTGGTCGCC
AGCGAACGCGGTGCCGGCGC

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 776; Mature: 775

Protein sequence:

>776_residues
MSVAKFVAANGREAMRQVREAMGPDAVVLSNRTVEGGVEIVAMRDADLGSVQATAQVYVPPAPVAEPTAIGDLRGELQSM
RAMLERQLAGISPAQSAVPSAAAHGVAASDPLRESLFEWMVGAGFSGQLARTLLARLPLGYDRPAAMGWIRTELASKLPV
LGDEDSLFAQGGVLALVGPTGVGKTTTTAKLAARFVLRHGADKLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKDAADL
RFALAAMKDKHLVIIDTVGMSQRDRSLSEQIAMLAGVPAPVQRVLLLNGASHGDTLNEVVHAYRHDAAPDGGGIDGCIIS
KLDEATHLGSVLDVVIRHRLPVFYASTGQRVPEHLELANSTALVERAFLTPRRGSVFADADAARRRSAGTDDEAPARGGA
DEVLRSLTDSADALSQCVAELNGAGLGLDLARSLWQQRSAGAPALRAMSQQVREAVCRDVTRQCEQYVLASAATLQVAVP
GRRTPQPMQHTLWLADRDGMPLAATVTPTGRAGQPLGEAESDAASLRAAMSAARKVVNLIDAVPTAATLARWQQAGERWV
ASARKTARVVSAGAAWKLDALADTLTFHAVGEDTVREREAVRWLASAEVRVPDSPVRGKGTPEGGIDACLVVARLADRAT
GELLDTRYLLCDPALAQDAAQVARWALWTDAADARLRTLRHAIDHFAQDAESGHAAGAALAALQLGLAVLRLEHAPTAAA
PAFLARLAGRTVRQGVPVPGTVLNEGMGRMLALLDVLEYYPGRGTAVPAEAMEVLQ

Sequences:

>Translated_776_residues
MSVAKFVAANGREAMRQVREAMGPDAVVLSNRTVEGGVEIVAMRDADLGSVQATAQVYVPPAPVAEPTAIGDLRGELQSM
RAMLERQLAGISPAQSAVPSAAAHGVAASDPLRESLFEWMVGAGFSGQLARTLLARLPLGYDRPAAMGWIRTELASKLPV
LGDEDSLFAQGGVLALVGPTGVGKTTTTAKLAARFVLRHGADKLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKDAADL
RFALAAMKDKHLVIIDTVGMSQRDRSLSEQIAMLAGVPAPVQRVLLLNGASHGDTLNEVVHAYRHDAAPDGGGIDGCIIS
KLDEATHLGSVLDVVIRHRLPVFYASTGQRVPEHLELANSTALVERAFLTPRRGSVFADADAARRRSAGTDDEAPARGGA
DEVLRSLTDSADALSQCVAELNGAGLGLDLARSLWQQRSAGAPALRAMSQQVREAVCRDVTRQCEQYVLASAATLQVAVP
GRRTPQPMQHTLWLADRDGMPLAATVTPTGRAGQPLGEAESDAASLRAAMSAARKVVNLIDAVPTAATLARWQQAGERWV
ASARKTARVVSAGAAWKLDALADTLTFHAVGEDTVREREAVRWLASAEVRVPDSPVRGKGTPEGGIDACLVVARLADRAT
GELLDTRYLLCDPALAQDAAQVARWALWTDAADARLRTLRHAIDHFAQDAESGHAAGAALAALQLGLAVLRLEHAPTAAA
PAFLARLAGRTVRQGVPVPGTVLNEGMGRMLALLDVLEYYPGRGTAVPAEAMEVLQ
>Mature_775_residues
SVAKFVAANGREAMRQVREAMGPDAVVLSNRTVEGGVEIVAMRDADLGSVQATAQVYVPPAPVAEPTAIGDLRGELQSMR
AMLERQLAGISPAQSAVPSAAAHGVAASDPLRESLFEWMVGAGFSGQLARTLLARLPLGYDRPAAMGWIRTELASKLPVL
GDEDSLFAQGGVLALVGPTGVGKTTTTAKLAARFVLRHGADKLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKDAADLR
FALAAMKDKHLVIIDTVGMSQRDRSLSEQIAMLAGVPAPVQRVLLLNGASHGDTLNEVVHAYRHDAAPDGGGIDGCIISK
LDEATHLGSVLDVVIRHRLPVFYASTGQRVPEHLELANSTALVERAFLTPRRGSVFADADAARRRSAGTDDEAPARGGAD
EVLRSLTDSADALSQCVAELNGAGLGLDLARSLWQQRSAGAPALRAMSQQVREAVCRDVTRQCEQYVLASAATLQVAVPG
RRTPQPMQHTLWLADRDGMPLAATVTPTGRAGQPLGEAESDAASLRAAMSAARKVVNLIDAVPTAATLARWQQAGERWVA
SARKTARVVSAGAAWKLDALADTLTFHAVGEDTVREREAVRWLASAEVRVPDSPVRGKGTPEGGIDACLVVARLADRATG
ELLDTRYLLCDPALAQDAAQVARWALWTDAADARLRTLRHAIDHFAQDAESGHAAGAALAALQLGLAVLRLEHAPTAAAP
AFLARLAGRTVRQGVPVPGTVLNEGMGRMLALLDVLEYYPGRGTAVPAEAMEVLQ

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=192, Percent_Identity=32.8125, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 81862; Mature: 81731

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAKFVAANGREAMRQVREAMGPDAVVLSNRTVEGGVEIVAMRDADLGSVQATAQVYVP
CCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCEECCCEEEEEEECCCCCCCEEEEEEEEC
PAPVAEPTAIGDLRGELQSMRAMLERQLAGISPAQSAVPSAAAHGVAASDPLRESLFEWM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCCCHHHHHHHHHH
VGAGFSGQLARTLLARLPLGYDRPAAMGWIRTELASKLPVLGDEDSLFAQGGVLALVGPT
HCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEECCC
GVGKTTTTAKLAARFVLRHGADKLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKDAADL
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCHHHHHHHHHHCCCHHHHHHHHHH
RFALAAMKDKHLVIIDTVGMSQRDRSLSEQIAMLAGVPAPVQRVLLLNGASHGDTLNEVV
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHH
HAYRHDAAPDGGGIDGCIISKLDEATHLGSVLDVVIRHRLPVFYASTGQRVPEHLELANS
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHH
TALVERAFLTPRRGSVFADADAARRRSAGTDDEAPARGGADEVLRSLTDSADALSQCVAE
HHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH
LNGAGLGLDLARSLWQQRSAGAPALRAMSQQVREAVCRDVTRQCEQYVLASAATLQVAVP
HCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
GRRTPQPMQHTLWLADRDGMPLAATVTPTGRAGQPLGEAESDAASLRAAMSAARKVVNLI
CCCCCCCHHHEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DAVPTAATLARWQQAGERWVASARKTARVVSAGAAWKLDALADTLTFHAVGEDTVREREA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHEECCCHHHHHHHH
VRWLASAEVRVPDSPVRGKGTPEGGIDACLVVARLADRATGELLDTRYLLCDPALAQDAA
HHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHH
QVARWALWTDAADARLRTLRHAIDHFAQDAESGHAAGAALAALQLGLAVLRLEHAPTAAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
PAFLARLAGRTVRQGVPVPGTVLNEGMGRMLALLDVLEYYPGRGTAVPAEAMEVLQ
HHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
SVAKFVAANGREAMRQVREAMGPDAVVLSNRTVEGGVEIVAMRDADLGSVQATAQVYVP
CHHHHHHCCCHHHHHHHHHHCCCCEEEEECCEECCCEEEEEEECCCCCCCEEEEEEEEC
PAPVAEPTAIGDLRGELQSMRAMLERQLAGISPAQSAVPSAAAHGVAASDPLRESLFEWM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCCCHHHHHHHHHH
VGAGFSGQLARTLLARLPLGYDRPAAMGWIRTELASKLPVLGDEDSLFAQGGVLALVGPT
HCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEECCC
GVGKTTTTAKLAARFVLRHGADKLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKDAADL
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCHHHHHHHHHHCCCHHHHHHHHHH
RFALAAMKDKHLVIIDTVGMSQRDRSLSEQIAMLAGVPAPVQRVLLLNGASHGDTLNEVV
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHH
HAYRHDAAPDGGGIDGCIISKLDEATHLGSVLDVVIRHRLPVFYASTGQRVPEHLELANS
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHH
TALVERAFLTPRRGSVFADADAARRRSAGTDDEAPARGGADEVLRSLTDSADALSQCVAE
HHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH
LNGAGLGLDLARSLWQQRSAGAPALRAMSQQVREAVCRDVTRQCEQYVLASAATLQVAVP
HCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
GRRTPQPMQHTLWLADRDGMPLAATVTPTGRAGQPLGEAESDAASLRAAMSAARKVVNLI
CCCCCCCHHHEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DAVPTAATLARWQQAGERWVASARKTARVVSAGAAWKLDALADTLTFHAVGEDTVREREA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHEECCCHHHHHHHH
VRWLASAEVRVPDSPVRGKGTPEGGIDACLVVARLADRATGELLDTRYLLCDPALAQDAA
HHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHH
QVARWALWTDAADARLRTLRHAIDHFAQDAESGHAAGAALAALQLGLAVLRLEHAPTAAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
PAFLARLAGRTVRQGVPVPGTVLNEGMGRMLALLDVLEYYPGRGTAVPAEAMEVLQ
HHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]