| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694121
Identifier: 116694121
GI number: 116694121
Start: 190257
End: 191078
Strand: Direct
Name: 116694121
Synonym: H16_B0166
Alternate gene names: NA
Gene position: 190257-191078 (Clockwise)
Preceding gene: 116694115
Following gene: 116694124
Centisome position: 6.53
GC content: 72.26
Gene sequence:
>822_bases ATGACCTCGCTGGACCCCTGCGCCGACCTGCCTTCCTCCGTCCTGTCTGCCGATGCCGGCGCGCTGCCGCGCCTGGTGCA GGCCTTCCACGCCAACGGTTTCGTGATCCTGCGCGGCTTTGCCGATGAGCCGGCGTGCGCGGCGCTGGAGGCGGTGACGC GTGAGCACCTGGCCGCGGCGGTGCCGCCGGTGGAGTTCGAGGCCGACCTGGGCTATCCCGGCGCGCCGGCCGCACGCGAT GCCGCCGGCGGCGGCACGGTCAGGCGGCTGCGCCAGGCCTACGGGCGCGACGAGGTCTTCCGCCGCTGGGCCAGCGCCCC GAAGCTGGTGGCGGTGGTGCAGGCGCTGCTGGGCGAGCCCGCCCGCATCACGCTGGCGCACCACAACTGCGTGATGACCA AGCATCCGCACTACGGCAGCCAGACTGGCTGGCACCGCGATACGCGCTACTGGTCGTTTGCCCGGCCGGAACTGGTGACG GTGTGGCTGGCGCTGGGCGACGAGGACGAACGCAACGGCGTGCTGCGCGTCATCCCGGGTTCGCACCAGGCGAAGCTGGA GCCGGGCCAGCTGGACCCGGCCGAATTCCTGATCGAAGCCCACCCCGCCAGCCAGCCCCTGCTGGATGCCGCGCAGCCGC TGGCGCTGCACCGCGGCGACGTGCTGTTTTTCGACAGCCGGCTGTTCCATGCGGCCGGCCGCAATGCCTCCGACGCGGTC AAGCTGTCAGTGGCGTTTGCGTATTTCGGGGCCAGCAACCGGCCGCTGGACGGCACGCGCTCGGCCGAGTTCGGCAGCGT GGAGCTGCCCGCGGCAGTCTGA
Upstream 100 bases:
>100_bases GCGCCTGCGCCAGATTGCGCCGGTTCTGGCATCATGAGCCTGTCGGGCCACCGCGGCCCTTCCCATTCCTCTTTCCGCTG CCTGTACCGCGCCTGCTGCA
Downstream 100 bases:
>100_bases TCCCCGCGGCTGTGCTCAGGTGCGCAGCCCGACCAGCCCGGAAATCTTCTCCGAAGCTTCCAGCAGCGGCGGCAGGAAAC GCTCCAGCATCTCCTGCGCG
Product: potassium channel protein
Products: NA
Alternate protein names: Deoxygenase; Hypophosphite Dioxygenase; Potassium Channel Protein; Phytanoyl-CoA Dioxygenase Family Protein; Phytanoyl-CoA Dioxygenase PhyH Family
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTSLDPCADLPSSVLSADAGALPRLVQAFHANGFVILRGFADEPACAALEAVTREHLAAAVPPVEFEADLGYPGAPAARD AAGGGTVRRLRQAYGRDEVFRRWASAPKLVAVVQALLGEPARITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFARPELVT VWLALGDEDERNGVLRVIPGSHQAKLEPGQLDPAEFLIEAHPASQPLLDAAQPLALHRGDVLFFDSRLFHAAGRNASDAV KLSVAFAYFGASNRPLDGTRSAEFGSVELPAAV
Sequences:
>Translated_273_residues MTSLDPCADLPSSVLSADAGALPRLVQAFHANGFVILRGFADEPACAALEAVTREHLAAAVPPVEFEADLGYPGAPAARD AAGGGTVRRLRQAYGRDEVFRRWASAPKLVAVVQALLGEPARITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFARPELVT VWLALGDEDERNGVLRVIPGSHQAKLEPGQLDPAEFLIEAHPASQPLLDAAQPLALHRGDVLFFDSRLFHAAGRNASDAV KLSVAFAYFGASNRPLDGTRSAEFGSVELPAAV >Mature_272_residues TSLDPCADLPSSVLSADAGALPRLVQAFHANGFVILRGFADEPACAALEAVTREHLAAAVPPVEFEADLGYPGAPAARDA AGGGTVRRLRQAYGRDEVFRRWASAPKLVAVVQALLGEPARITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFARPELVTV WLALGDEDERNGVLRVIPGSHQAKLEPGQLDPAEFLIEAHPASQPLLDAAQPLALHRGDVLFFDSRLFHAAGRNASDAVK LSVAFAYFGASNRPLDGTRSAEFGSVELPAAV
Specific function: Unknown
COG id: COG5285
COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17544580, Length=239, Percent_Identity=25.1046025104602, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17544582, Length=168, Percent_Identity=26.7857142857143, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29294; Mature: 29163
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLDPCADLPSSVLSADAGALPRLVQAFHANGFVILRGFADEPACAALEAVTREHLAAA CCCCCCHHHCHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH VPPVEFEADLGYPGAPAARDAAGGGTVRRLRQAYGRDEVFRRWASAPKLVAVVQALLGEP CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHCCC ARITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFARPELVTVWLALGDEDERNGVLRVIPG EEEEEEECCEEEECCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCEEEECCC SHQAKLEPGQLDPAEFLIEAHPASQPLLDAAQPLALHRGDVLFFDSRLFHAAGRNASDAV CCCCCCCCCCCCHHHHEEECCCCCCCHHHHHCCHHHCCCCEEEECCHHHHHCCCCCCHHE KLSVAFAYFGASNRPLDGTRSAEFGSVELPAAV EEEEEEEEECCCCCCCCCCCCCCCCCEECCCCC >Mature Secondary Structure TSLDPCADLPSSVLSADAGALPRLVQAFHANGFVILRGFADEPACAALEAVTREHLAAA CCCCCHHHCHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH VPPVEFEADLGYPGAPAARDAAGGGTVRRLRQAYGRDEVFRRWASAPKLVAVVQALLGEP CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHCCC ARITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFARPELVTVWLALGDEDERNGVLRVIPG EEEEEEECCEEEECCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCEEEECCC SHQAKLEPGQLDPAEFLIEAHPASQPLLDAAQPLALHRGDVLFFDSRLFHAAGRNASDAV CCCCCCCCCCCCHHHHEEECCCCCCCHHHHHCCHHHCCCCEEEECCHHHHHCCCCCCHHE KLSVAFAYFGASNRPLDGTRSAEFGSVELPAAV EEEEEEEEECCCCCCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA