| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is dhaAF [H]
Identifier: 116691155
GI number: 116691155
Start: 3454208
End: 3455023
Strand: Direct
Name: dhaAF [H]
Synonym: Bcen2424_3137
Alternate gene names: 116691155
Gene position: 3454208-3455023 (Clockwise)
Preceding gene: 116691153
Following gene: 116691161
Centisome position: 99.15
GC content: 67.89
Gene sequence:
>816_bases ATGCTCGAACTCCCGAACCGCTTCAATTTCGAAGGCCACCGGATTGCATGGGGCACGCTCGGCGAAGGCCCGCCGCTCGT CCTCGTGCACGGCACGCCGTTTTCGTCGCAGGTCTGGCGCCGGATCGCGCCGTGGCTGGCGCGGCGCCATCGCGTGTACT TCTACGACCTGCTCGGCTACGGCCAGTCCGACATGCCGGATGCGGACGTGTCGCTGGGTTGCCAGAACGTGCTGTTCGGC GCGCTGCTGAATGAATGGAAACTGGCGCGGCCGCGCGTGCTCGCGCACGACTACGGCGGCGCAACCGTGCTGCGCGCGCA TTTTCTCGACGGCATCGCGTATGCGGATCTGACGCTCGTGAACCCGGTCGCGATCGCGCCGCAAGGCTCGCCGTTCGTGC GCCACGTCGCGCAGCACGAAGCTGCGTTCACCGGCTTGCCCGCGTACGCACACCATGCGCTCGTGTCGACGTATATCGGC CAGGCAGTCGCACGGCCGTTGAGCGACGACGTGCTGTCGATCTACCGCGAGCCGTGGCTCACGTCGGCCGGCCAGGCCGC GTTCTATCGCCAGATCGCGCAGATGCGCCAGCGCTACATCGAGGAAGCGGAGGCCCGCTACGCGCCGCCGGACTTTCCGG TGCGCATCGTGTGGGGCGAGGACGACGTGTGGATTCCGCTCGAACAAGGGCAGGCGCTCGCCGATCGCATCGCGGACGGC CAGTTGATCCGGGTCCCGCACGCGGGCCATCTGGTTCAGGAGGATGCGCCGGAAGCAATCGTCGCCGCCGTGCTCGACGG ATACACGCTGGGCTGA
Upstream 100 bases:
>100_bases GGTCGGATCGAGTAACCATTTATTTTCGCCTATCGGTTTCACATCCGGAGAATCCGGCGTAACCTGTTAACAACCGAAAC AGGTTATCACGGAGAAGCCG
Downstream 100 bases:
>100_bases GCATCACCCCAGCGCGTGTTACGTGCCGCGTCAGAACGCCGGCACGCCTTGCGCGAGCGTCGCGACGAACTTCGCGGTGC GCGGGTCGCGCGGCCGGCCG
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLELPNRFNFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVYFYDLLGYGQSDMPDADVSLGCQNVLFG ALLNEWKLARPRVLAHDYGGATVLRAHFLDGIAYADLTLVNPVAIAPQGSPFVRHVAQHEAAFTGLPAYAHHALVSTYIG QAVARPLSDDVLSIYREPWLTSAGQAAFYRQIAQMRQRYIEEAEARYAPPDFPVRIVWGEDDVWIPLEQGQALADRIADG QLIRVPHAGHLVQEDAPEAIVAAVLDGYTLG
Sequences:
>Translated_271_residues MLELPNRFNFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVYFYDLLGYGQSDMPDADVSLGCQNVLFG ALLNEWKLARPRVLAHDYGGATVLRAHFLDGIAYADLTLVNPVAIAPQGSPFVRHVAQHEAAFTGLPAYAHHALVSTYIG QAVARPLSDDVLSIYREPWLTSAGQAAFYRQIAQMRQRYIEEAEARYAPPDFPVRIVWGEDDVWIPLEQGQALADRIADG QLIRVPHAGHLVQEDAPEAIVAAVLDGYTLG >Mature_271_residues MLELPNRFNFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVYFYDLLGYGQSDMPDADVSLGCQNVLFG ALLNEWKLARPRVLAHDYGGATVLRAHFLDGIAYADLTLVNPVAIAPQGSPFVRHVAQHEAAFTGLPAYAHHALVSTYIG QAVARPLSDDVLSIYREPWLTSAGQAAFYRQIAQMRQRYIEEAEARYAPPDFPVRIVWGEDDVWIPLEQGQALADRIADG QLIRVPHAGHLVQEDAPEAIVAAVLDGYTLG
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity, which includes mono- and di- chlorinated
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.5 [H]
Molecular weight: Translated: 30079; Mature: 30079
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELPNRFNFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVYFYDLLGY CCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEEECC GQSDMPDADVSLGCQNVLFGALLNEWKLARPRVLAHDYGGATVLRAHFLDGIAYADLTLV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCEEEE NPVAIAPQGSPFVRHVAQHEAAFTGLPAYAHHALVSTYIGQAVARPLSDDVLSIYREPWL CCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC TSAGQAAFYRQIAQMRQRYIEEAEARYAPPDFPVRIVWGEDDVWIPLEQGQALADRIADG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEHHCCHHHHHHHCCC QLIRVPHAGHLVQEDAPEAIVAAVLDGYTLG CEEECCCCCCHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MLELPNRFNFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVYFYDLLGY CCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEEECC GQSDMPDADVSLGCQNVLFGALLNEWKLARPRVLAHDYGGATVLRAHFLDGIAYADLTLV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCEEEE NPVAIAPQGSPFVRHVAQHEAAFTGLPAYAHHALVSTYIGQAVARPLSDDVLSIYREPWL CCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC TSAGQAAFYRQIAQMRQRYIEEAEARYAPPDFPVRIVWGEDDVWIPLEQGQALADRIADG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEHHCCHHHHHHHCCC QLIRVPHAGHLVQEDAPEAIVAAVLDGYTLG CEEECCCCCCHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10094681; 10735862 [H]