| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691154
Identifier: 116691154
GI number: 116691154
Start: 3453512
End: 3454126
Strand: Reverse
Name: 116691154
Synonym: Bcen2424_3136
Alternate gene names: NA
Gene position: 3454126-3453512 (Counterclockwise)
Preceding gene: 116691156
Following gene: 116691152
Centisome position: 99.15
GC content: 71.22
Gene sequence:
>615_bases ATGGTTACTCGATCCGACCCGGCGCGACCCGGGTACGAATGGCGTGAGACCGATTTCATCGGCGGCCATCCGGCGCTCGA CTTTCTCAATACGGTGGCCGACACGGGCAAGACGCGCGACGAGGACAAACTCGTCGACTGGCCGGCCGTGCGGGCGTGGG CCGGGAAAGCGGGATTGCTGGCGCCCGACGATCTGGCGCGGCTGCTGCGTCATCCGCGCCAGGACGGCCCGGATGAACTG GCGGCGCTGCGCCGCTTTCGCGACGACGCGTACGTCGCGATCGCGCATCTGACGGCCGAAGGCGGCGGCAGCACGGGCGC GCGCGCGGCGGAGCGGCTCGCGGTGGCGATCCGCGACGCGATCGGGCGCAGCGCATTCGACGCGGTCGGCGGCCGCTTCG CGTGGCGGCCCGATGCACGGGCCGCGTCGCGCTGGGTCGATGCGGTCGCGCTCGGTTTCGAACATCTGATGCGCAGCGAC GATTTCGCGCGCGTGCGGCAATGTGGTCGGTGTACGTGGTTCTTCGTCGATCGCGGCCGCGGCGTGGGGCGGCGGTGGTG CGACATGCGCACGTGCGGGAATCGCGCGAAGGTGGAGGCGTTCAGGGAGCGGTGA
Upstream 100 bases:
>100_bases GGTTCGGGAGTTCGAGCATCGGCTTCTCCGTGATAACCTGTTTCGGTTGTTAACAGGTTACGCCGGATTCTCCGGATGTG AAACCGATAGGCGAAAATAA
Downstream 100 bases:
>100_bases TGCGCGCGTCGCGACGATTGCCGTGCCGCGCGCGCGTCATTGAGCGGCCTCGTGCGGACGGTGATCGGGCCATAACGTCG CGGCGACGAACAGCCCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MVTRSDPARPGYEWRETDFIGGHPALDFLNTVADTGKTRDEDKLVDWPAVRAWAGKAGLLAPDDLARLLRHPRQDGPDEL AALRRFRDDAYVAIAHLTAEGGGSTGARAAERLAVAIRDAIGRSAFDAVGGRFAWRPDARAASRWVDAVALGFEHLMRSD DFARVRQCGRCTWFFVDRGRGVGRRWCDMRTCGNRAKVEAFRER
Sequences:
>Translated_204_residues MVTRSDPARPGYEWRETDFIGGHPALDFLNTVADTGKTRDEDKLVDWPAVRAWAGKAGLLAPDDLARLLRHPRQDGPDEL AALRRFRDDAYVAIAHLTAEGGGSTGARAAERLAVAIRDAIGRSAFDAVGGRFAWRPDARAASRWVDAVALGFEHLMRSD DFARVRQCGRCTWFFVDRGRGVGRRWCDMRTCGNRAKVEAFRER >Mature_204_residues MVTRSDPARPGYEWRETDFIGGHPALDFLNTVADTGKTRDEDKLVDWPAVRAWAGKAGLLAPDDLARLLRHPRQDGPDEL AALRRFRDDAYVAIAHLTAEGGGSTGARAAERLAVAIRDAIGRSAFDAVGGRFAWRPDARAASRWVDAVALGFEHLMRSD DFARVRQCGRCTWFFVDRGRGVGRRWCDMRTCGNRAKVEAFRER
Specific function: Unknown
COG id: COG5516
COG function: function code R; Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22756; Mature: 22756
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRSDPARPGYEWRETDFIGGHPALDFLNTVADTGKTRDEDKLVDWPAVRAWAGKAGLL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCC APDDLARLLRHPRQDGPDELAALRRFRDDAYVAIAHLTAEGGGSTGARAAERLAVAIRDA CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH IGRSAFDAVGGRFAWRPDARAASRWVDAVALGFEHLMRSDDFARVRQCGRCTWFFVDRGR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCC GVGRRWCDMRTCGNRAKVEAFRER CCCHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MVTRSDPARPGYEWRETDFIGGHPALDFLNTVADTGKTRDEDKLVDWPAVRAWAGKAGLL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCC APDDLARLLRHPRQDGPDELAALRRFRDDAYVAIAHLTAEGGGSTGARAAERLAVAIRDA CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH IGRSAFDAVGGRFAWRPDARAASRWVDAVALGFEHLMRSDDFARVRQCGRCTWFFVDRGR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCC GVGRRWCDMRTCGNRAKVEAFRER CCCHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA