Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116691151

Identifier: 116691151

GI number: 116691151

Start: 3450694

End: 3451560

Strand: Reverse

Name: 116691151

Synonym: Bcen2424_3133

Alternate gene names: NA

Gene position: 3451560-3450694 (Counterclockwise)

Preceding gene: 116691152

Following gene: 116691149

Centisome position: 99.07

GC content: 69.67

Gene sequence:

>867_bases
ATGTTCGACCAGATCGTCTTTGCGGGCGGCGGCAATCGCTGCTGGTGGCAGGCCGGCTTCTGGGATGTCGCACAGCCGGC
CCTCGCCCTGCGCCCGCGCGTGATCACCGGCATCTCGGCCGGCGCGGCCACCGCCTGCATGCTGTATACGCGCGACGCCG
CATGGGTGATGCGCTATTACGAAGAGGCGCTGCGCCACAACCGGAAGAATGCCTACTGGGGCAACCTGTTCGGGCGCGAG
CCCGTGTTTCCGCATTACCGGATCTATCGTCAGGCGCTGCTCGACATCTACGGCGAGCCGTTCGCGCAGCTCGCCGCGGC
GCCGGAGATCCGCATCGGCGTGTCGCACGTGCCGCGCTGGCTCGGTGCGCGCAGCGCGGTCGCGGCCGGCCTCGTCGCAT
ACAACATCGAGAAGTACGTGCGCAAGACGCTGCACCCGACGCTCGGGCGCACGCTCGGGTTTCGCCCCGAATTCGTGCGG
GCGCAGGCCTGCACGCACGTCGACGAACTCGCCGACCTGATCCTGCAGTCGTCCTGCACGCCGCCGTTCACGCCGGTGCT
GCGGCGTGGCGGCCGGCCGGTGCTCGACGGCGGGATGGTCGACAACGTGCCGGTCGATGCGCTCGATCCGTCGCCGGGCG
ACGTGCTGGTGCTGGTCACGCGGCTGTATCCGCGTCCGCAGATGTTCACGGTCGCGCATGGCGACCAGCGGCGGCTGTAC
GTGCAGCCGTCGAGCAAGGTGCCGATTTCGAGCTGGGATTACACGAGCCCGTCGCAGATGCGGCATGCGTACGATCTCGG
GCGGCGCGACGGTGAGCACTTCCTCACGCGGGTCGGCGCGATGACGGGCGGCCGCGTGGCCGCCTGA

Upstream 100 bases:

>100_bases
GCCGCAACCTCGTGTTCGGCGAAGTCGAGCTGTTCGACGAGGACGGCAAGATGGCCGTCCACGCGACGTCGACCTACGCG
CTCGTCAGCTGAGCGGCGCG

Downstream 100 bases:

>100_bases
CGAGCGGGAATGAAAGGGGGCCGCGCGACGCGCGCAGCCCGTGCGATCAGCGCTTGCGGATCGGCGTCAGCGCTTCCGGG
TTGGCGACGCTCGACATGTC

Product: patatin

Products: NA

Alternate protein names: Patatin-Like Phospholipase; PatatiN-Like Phospholipase; Patatin-Like Phospholipase Family Protein

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MFDQIVFAGGGNRCWWQAGFWDVAQPALALRPRVITGISAGAATACMLYTRDAAWVMRYYEEALRHNRKNAYWGNLFGRE
PVFPHYRIYRQALLDIYGEPFAQLAAAPEIRIGVSHVPRWLGARSAVAAGLVAYNIEKYVRKTLHPTLGRTLGFRPEFVR
AQACTHVDELADLILQSSCTPPFTPVLRRGGRPVLDGGMVDNVPVDALDPSPGDVLVLVTRLYPRPQMFTVAHGDQRRLY
VQPSSKVPISSWDYTSPSQMRHAYDLGRRDGEHFLTRVGAMTGGRVAA

Sequences:

>Translated_288_residues
MFDQIVFAGGGNRCWWQAGFWDVAQPALALRPRVITGISAGAATACMLYTRDAAWVMRYYEEALRHNRKNAYWGNLFGRE
PVFPHYRIYRQALLDIYGEPFAQLAAAPEIRIGVSHVPRWLGARSAVAAGLVAYNIEKYVRKTLHPTLGRTLGFRPEFVR
AQACTHVDELADLILQSSCTPPFTPVLRRGGRPVLDGGMVDNVPVDALDPSPGDVLVLVTRLYPRPQMFTVAHGDQRRLY
VQPSSKVPISSWDYTSPSQMRHAYDLGRRDGEHFLTRVGAMTGGRVAA
>Mature_288_residues
MFDQIVFAGGGNRCWWQAGFWDVAQPALALRPRVITGISAGAATACMLYTRDAAWVMRYYEEALRHNRKNAYWGNLFGRE
PVFPHYRIYRQALLDIYGEPFAQLAAAPEIRIGVSHVPRWLGARSAVAAGLVAYNIEKYVRKTLHPTLGRTLGFRPEFVR
AQACTHVDELADLILQSSCTPPFTPVLRRGGRPVLDGGMVDNVPVDALDPSPGDVLVLVTRLYPRPQMFTVAHGDQRRLY
VQPSSKVPISSWDYTSPSQMRHAYDLGRRDGEHFLTRVGAMTGGRVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32154; Mature: 32154

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDQIVFAGGGNRCWWQAGFWDVAQPALALRPRVITGISAGAATACMLYTRDAAWVMRYY
CCCCEEEECCCCEEEEECCCHHHHCHHHHHCCHHEECCCCCHHHEEHEEECHHHHHHHHH
EEALRHNRKNAYWGNLFGREPVFPHYRIYRQALLDIYGEPFAQLAAAPEIRIGVSHVPRW
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEECHHHHHHH
LGARSAVAAGLVAYNIEKYVRKTLHPTLGRTLGFRPEFVRAQACTHVDELADLILQSSCT
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PPFTPVLRRGGRPVLDGGMVDNVPVDALDPSPGDVLVLVTRLYPRPQMFTVAHGDQRRLY
CCCHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCEEEEEECCCEEEE
VQPSSKVPISSWDYTSPSQMRHAYDLGRRDGEHFLTRVGAMTGGRVAA
ECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFDQIVFAGGGNRCWWQAGFWDVAQPALALRPRVITGISAGAATACMLYTRDAAWVMRYY
CCCCEEEECCCCEEEEECCCHHHHCHHHHHCCHHEECCCCCHHHEEHEEECHHHHHHHHH
EEALRHNRKNAYWGNLFGREPVFPHYRIYRQALLDIYGEPFAQLAAAPEIRIGVSHVPRW
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEECHHHHHHH
LGARSAVAAGLVAYNIEKYVRKTLHPTLGRTLGFRPEFVRAQACTHVDELADLILQSSCT
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PPFTPVLRRGGRPVLDGGMVDNVPVDALDPSPGDVLVLVTRLYPRPQMFTVAHGDQRRLY
CCCHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCEEEEEECCCEEEE
VQPSSKVPISSWDYTSPSQMRHAYDLGRRDGEHFLTRVGAMTGGRVAA
ECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA