Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yigA [C]

Identifier: 116691104

GI number: 116691104

Start: 3399423

End: 3400148

Strand: Direct

Name: yigA [C]

Synonym: Bcen2424_3086

Alternate gene names: 116691104

Gene position: 3399423-3400148 (Clockwise)

Preceding gene: 116691103

Following gene: 116691105

Centisome position: 97.58

GC content: 72.04

Gene sequence:

>726_bases
ATGAACGATCGCGAAGTCGCCGACTACCTGCTCGCCAACCCCGAATTCTTCGCGCAGCACGCCGAGCTGCTCGCGACGAT
CCGTCTCGCGAATCCGCACGGCAAGGCCGCGATCTCGCTGCAGGAGCGGCAGATGGAGATGCTGCGCGACAAGAACAAGC
ATCTCGAGCGCCGGCTCGCCGAGCTCGTGCGCTACGGCCACGAGAACGACAGCCTGTCCGCGAAGTTCAGCCGCTGGACC
GCGCGCGTGATCGCGGAACGCGATCCGTACGCGCTGCCGCGCACGATCGCCGACGGCATCGCCGACGTGTTCGACGTGCC
GCAGACGGCGCTGCGCGTGTGGGACGTCGCCGACACCTACGCGCAAGCCGACTTCGCGCGCCAGGTCGGCGAGGAAGTGC
GCCTGTTCACGAACGGCCTGTCCACGCCGTACTGCGGCGCGAACACCGGCTTCGAAGCCGCCCAGTGGCTCGCGCCCGCG
CTCGCCGCCCCGGCCGCGAACGCAGCGGAAGGCGCCGAAGCCGCGCCGGCCGGCGACGGCTCGGCCGCGTCGGTCGCGCT
GCTCGCGCTGCGCGCGCCGCTCGCCGGCAGCGATGCACCCGCGTTCGGCCTGCTGGTCCTCGGTTCGCCCGATCCGCGCC
GCTTCCACGACGGGATGGCCACCGACTTCCTCGCGCAGATCGCGACGCTCGCGAGCGCCGCGCTCACGCGCCTGCTGCCG
CACTGA

Upstream 100 bases:

>100_bases
GCGCTGATGATGGCCGGCCCCGCCACGACCGTGTTCGAAGGTGAGATCGACCTGAACGCCTGACCCTGCAACGTCCCTGA
TAACTGAACGCTCCCGCCAC

Downstream 100 bases:

>100_bases
TCCGCCGCACGCGATGACTGACGATCCGATCGCCGCCTACCTGTCGAACCTGAAGCACGTCAGGCAGCTGTCGGAACACA
CGCTGCGCGCGTACACGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNDREVADYLLANPEFFAQHAELLATIRLANPHGKAAISLQERQMEMLRDKNKHLERRLAELVRYGHENDSLSAKFSRWT
ARVIAERDPYALPRTIADGIADVFDVPQTALRVWDVADTYAQADFARQVGEEVRLFTNGLSTPYCGANTGFEAAQWLAPA
LAAPAANAAEGAEAAPAGDGSAASVALLALRAPLAGSDAPAFGLLVLGSPDPRRFHDGMATDFLAQIATLASAALTRLLP
H

Sequences:

>Translated_241_residues
MNDREVADYLLANPEFFAQHAELLATIRLANPHGKAAISLQERQMEMLRDKNKHLERRLAELVRYGHENDSLSAKFSRWT
ARVIAERDPYALPRTIADGIADVFDVPQTALRVWDVADTYAQADFARQVGEEVRLFTNGLSTPYCGANTGFEAAQWLAPA
LAAPAANAAEGAEAAPAGDGSAASVALLALRAPLAGSDAPAFGLLVLGSPDPRRFHDGMATDFLAQIATLASAALTRLLP
H
>Mature_241_residues
MNDREVADYLLANPEFFAQHAELLATIRLANPHGKAAISLQERQMEMLRDKNKHLERRLAELVRYGHENDSLSAKFSRWT
ARVIAERDPYALPRTIADGIADVFDVPQTALRVWDVADTYAQADFARQVGEEVRLFTNGLSTPYCGANTGFEAAQWLAPA
LAAPAANAAEGAEAAPAGDGSAASVALLALRAPLAGSDAPAFGLLVLGSPDPRRFHDGMATDFLAQIATLASAALTRLLP
H

Specific function: Unknown

COG id: COG3159

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25901; Mature: 25901

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDREVADYLLANPEFFAQHAELLATIRLANPHGKAAISLQERQMEMLRDKNKHLERRLA
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
ELVRYGHENDSLSAKFSRWTARVIAERDPYALPRTIADGIADVFDVPQTALRVWDVADTY
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AQADFARQVGEEVRLFTNGLSTPYCGANTGFEAAQWLAPALAAPAANAAEGAEAAPAGDG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SAASVALLALRAPLAGSDAPAFGLLVLGSPDPRRFHDGMATDFLAQIATLASAALTRLLP
CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCC
H
C
>Mature Secondary Structure
MNDREVADYLLANPEFFAQHAELLATIRLANPHGKAAISLQERQMEMLRDKNKHLERRLA
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
ELVRYGHENDSLSAKFSRWTARVIAERDPYALPRTIADGIADVFDVPQTALRVWDVADTY
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AQADFARQVGEEVRLFTNGLSTPYCGANTGFEAAQWLAPALAAPAANAAEGAEAAPAGDG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SAASVALLALRAPLAGSDAPAFGLLVLGSPDPRRFHDGMATDFLAQIATLASAALTRLLP
CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA