Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116691076

Identifier: 116691076

GI number: 116691076

Start: 3373160

End: 3373894

Strand: Reverse

Name: 116691076

Synonym: Bcen2424_3058

Alternate gene names: NA

Gene position: 3373894-3373160 (Counterclockwise)

Preceding gene: 116691077

Following gene: 116691067

Centisome position: 96.84

GC content: 69.66

Gene sequence:

>735_bases
GTGAACGCGCCCGAAACGATCGACCCGCCCAAGACGGGCATGCCGCGCGCCGGCGTCACCGTGCTGCACCCGGCGGGCCG
CCCGCTGAACGACGACGAACTGGCCGCGCGCCGCCAGCGCTCGCGCCGCGCGACCTTCATCAAGTGGCTGCGCAAGGTGC
ACGGCTGGGTCGGGCTGTGGGGCGCGGTACTCGGGCTGCTGTTCGGCGTGACCGGCGTGCTGCTGAACCACCGCGCGCCG
CCGCTGAAGATTTCGACCGGCGAGCCGCAGGTCGAGGAGCTGCAGATCGCGCTGCCGGACCCGGTGCCGAAAACGCCCGC
CGCGATGACGAAGTGGCTGCAGCAGGAACTGCATTTCGACGGCAAGCCGGGCCGCATGCGCAAGGAGCCCGCGCAGGCCG
TCGCGTGGGGCGACAAGCGCGTGATGCAGCCCGAGCACTGGCAATTCGGCGTGTTCGGGCCGCACCAGAACCTGCAGGCC
GAATACTGGGTCGGCAACGGCTACGTGTCGGTGAAGCGCACCGGCAACACGTTCCTGACGACGCTGAACAACCTGCATCG
CGGCGTCGGGATGAATCTCGGCTGGGTGCTGCTGATGGATACGATCGCGGGTTCGCTGATCCTGCTGTCGCTGACGGGCG
TGCTGCTGTGGACCGAGCTGAACAAGCGCCGCACGGTCGGCGTCGTGCTGGTGGTCGGTTCGGTTGCCGCGGCGCTCGCT
GCCGGCCTGACCTGA

Upstream 100 bases:

>100_bases
TTTCGATTTATGTAATGATATCCATTCTCATTTTCATGCTGACCGGGCGGTGCGCACTCCTGCGCGCCGCCCGTTGTTTT
GAACGAATGGATACTTTCGC

Downstream 100 bases:

>100_bases
CCGACTTTCGCGCCGGGTAGCGTCCGGCGTCCGGCGAGCATGGCCGCCCGCCGGCGCGGGTCAGAGCCCGCAGGCCGCGC
CGCTGTTCGCCGCGATTTCG

Product: PepSY-associated TM helix domain-containing protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family Protein; PepSY-Associated TM Helix

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNAPETIDPPKTGMPRAGVTVLHPAGRPLNDDELAARRQRSRRATFIKWLRKVHGWVGLWGAVLGLLFGVTGVLLNHRAP
PLKISTGEPQVEELQIALPDPVPKTPAAMTKWLQQELHFDGKPGRMRKEPAQAVAWGDKRVMQPEHWQFGVFGPHQNLQA
EYWVGNGYVSVKRTGNTFLTTLNNLHRGVGMNLGWVLLMDTIAGSLILLSLTGVLLWTELNKRRTVGVVLVVGSVAAALA
AGLT

Sequences:

>Translated_244_residues
MNAPETIDPPKTGMPRAGVTVLHPAGRPLNDDELAARRQRSRRATFIKWLRKVHGWVGLWGAVLGLLFGVTGVLLNHRAP
PLKISTGEPQVEELQIALPDPVPKTPAAMTKWLQQELHFDGKPGRMRKEPAQAVAWGDKRVMQPEHWQFGVFGPHQNLQA
EYWVGNGYVSVKRTGNTFLTTLNNLHRGVGMNLGWVLLMDTIAGSLILLSLTGVLLWTELNKRRTVGVVLVVGSVAAALA
AGLT
>Mature_244_residues
MNAPETIDPPKTGMPRAGVTVLHPAGRPLNDDELAARRQRSRRATFIKWLRKVHGWVGLWGAVLGLLFGVTGVLLNHRAP
PLKISTGEPQVEELQIALPDPVPKTPAAMTKWLQQELHFDGKPGRMRKEPAQAVAWGDKRVMQPEHWQFGVFGPHQNLQA
EYWVGNGYVSVKRTGNTFLTTLNNLHRGVGMNLGWVLLMDTIAGSLILLSLTGVLLWTELNKRRTVGVVLVVGSVAAALA
AGLT

Specific function: Unknown

COG id: COG3295

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26758; Mature: 26758

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPETIDPPKTGMPRAGVTVLHPAGRPLNDDELAARRQRSRRATFIKWLRKVHGWVGLW
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVLGLLFGVTGVLLNHRAPPLKISTGEPQVEELQIALPDPVPKTPAAMTKWLQQELHFD
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHCCC
GKPGRMRKEPAQAVAWGDKRVMQPEHWQFGVFGPHQNLQAEYWVGNGYVSVKRTGNTFLT
CCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCEEEEEECCCHHHH
TLNNLHRGVGMNLGWVLLMDTIAGSLILLSLTGVLLWTELNKRRTVGVVLVVGSVAAALA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH
AGLT
HCCC
>Mature Secondary Structure
MNAPETIDPPKTGMPRAGVTVLHPAGRPLNDDELAARRQRSRRATFIKWLRKVHGWVGLW
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVLGLLFGVTGVLLNHRAPPLKISTGEPQVEELQIALPDPVPKTPAAMTKWLQQELHFD
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHCCC
GKPGRMRKEPAQAVAWGDKRVMQPEHWQFGVFGPHQNLQAEYWVGNGYVSVKRTGNTFLT
CCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCEEEEEECCCHHHH
TLNNLHRGVGMNLGWVLLMDTIAGSLILLSLTGVLLWTELNKRRTVGVVLVVGSVAAALA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH
AGLT
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA