| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691022
Identifier: 116691022
GI number: 116691022
Start: 3316586
End: 3317074
Strand: Reverse
Name: 116691022
Synonym: Bcen2424_3004
Alternate gene names: NA
Gene position: 3317074-3316586 (Counterclockwise)
Preceding gene: 116691023
Following gene: 116691021
Centisome position: 95.21
GC content: 63.8
Gene sequence:
>489_bases GTGCCGCGCGCGATACGGCGCGCACGAATCATTTCACCAACCAGAAGAGACAAGACCATGAAACGGGGAATCTGGCTGCC GGCGACTGCGGCCGCCTTGCTGCTCGCGGGCTGCGCGGCGCCGACCACGCCGCCGCTGTATCAGTGGACCGGCTATCAGC CGCAGGTGTACGAATACTTCAAGGGGCAGCAGGCGCCGCAGCAACAGATCGACGCGCTCGAAAAAGCGCTGCAGGAGATC CGCGCGAAGGGCCATACGCCGCCGCCGGGTTTCCATGCGCATCTCGGGATGCTGTATGCGAGCGTCGGCAACGAGCAGCA GGCCGAGCAGGAACTGCAGGCCGAGAAGCAACTGTTCCCGGAATCCGCCGCGTATATGGATTTCCTGATGAAGAAGAAGG CCGGTGCATCGAAAGCCGCGAATGCGGCGGCCGCGGGCCAGACCGTTGCCGGTCAGAAGAACGCCGATTCGAATCCCGCC AAACAGTGA
Upstream 100 bases:
>100_bases CTCGACGCTCAACGGCAAGGTGCTGGACCTCGCGATCCAGGAAGCCGTGAACCATCTCGTCGACCAGGTCGACGCCGGCG TGCTGAGGGCCGCGCAATAA
Downstream 100 bases:
>100_bases CACGCCCGCCATGTTCAAGACACTTTCATTCAAGCTGCTGTTTGCGCTGTCGATCGCCGCGCTGCTGAGCGCGTGCGCGC AGCCGGTGCAACGTCCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Periplasmic Protein
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPRAIRRARIISPTRRDKTMKRGIWLPATAAALLLAGCAAPTTPPLYQWTGYQPQVYEYFKGQQAPQQQIDALEKALQEI RAKGHTPPPGFHAHLGMLYASVGNEQQAEQELQAEKQLFPESAAYMDFLMKKKAGASKAANAAAAGQTVAGQKNADSNPA KQ
Sequences:
>Translated_162_residues MPRAIRRARIISPTRRDKTMKRGIWLPATAAALLLAGCAAPTTPPLYQWTGYQPQVYEYFKGQQAPQQQIDALEKALQEI RAKGHTPPPGFHAHLGMLYASVGNEQQAEQELQAEKQLFPESAAYMDFLMKKKAGASKAANAAAAGQTVAGQKNADSNPA KQ >Mature_161_residues PRAIRRARIISPTRRDKTMKRGIWLPATAAALLLAGCAAPTTPPLYQWTGYQPQVYEYFKGQQAPQQQIDALEKALQEIR AKGHTPPPGFHAHLGMLYASVGNEQQAEQELQAEKQLFPESAAYMDFLMKKKAGASKAANAAAAGQTVAGQKNADSNPAK Q
Specific function: Unknown
COG id: COG4259
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17645; Mature: 17514
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRAIRRARIISPTRRDKTMKRGIWLPATAAALLLAGCAAPTTPPLYQWTGYQPQVYEYF CCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH KGQQAPQQQIDALEKALQEIRAKGHTPPPGFHAHLGMLYASVGNEQQAEQELQAEKQLFP CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC ESAAYMDFLMKKKAGASKAANAAAAGQTVAGQKNADSNPAKQ CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRAIRRARIISPTRRDKTMKRGIWLPATAAALLLAGCAAPTTPPLYQWTGYQPQVYEYF CHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH KGQQAPQQQIDALEKALQEIRAKGHTPPPGFHAHLGMLYASVGNEQQAEQELQAEKQLFP CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC ESAAYMDFLMKKKAGASKAANAAAAGQTVAGQKNADSNPAKQ CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA