| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is puuA [H]
Identifier: 116691012
GI number: 116691012
Start: 3304199
End: 3305536
Strand: Direct
Name: puuA [H]
Synonym: Bcen2424_2994
Alternate gene names: 116691012
Gene position: 3304199-3305536 (Clockwise)
Preceding gene: 116691011
Following gene: 116691013
Centisome position: 94.84
GC content: 65.32
Gene sequence:
>1338_bases ATGCAAGACATCGAAGACTTTCTGAAGCAGCATCGGATCACCGAGGTCGAGGCGATCATCCCCGACATGGCCGGCATCGC GCGCGGCAAGATCACGCCGCGCAACAAGTTCACGTCCGGCGAATCGATGCGCCTGCCGCAAGCCGTGATGGTGCAGACCG TTACCGGCGAATACCCGGAAGACGGCTCGCTCACCGGCGTGACCGACCCCGACATGGTGTGCGTGCCCGACACGTCGACG ATCCGCCTGATCCCGTGGGCCGTGGACCCGACCGCGCAGGTGATCCACGATTGCGTGCACTTCGACGGCTCGCCGGTCGA GATCTCGCCGCGCTACGTGCTGCGCCGCGTGCTCGACCTGTACAAGGCGAAGGGCTGGAAACCGGTCGTGGCGCCGGAGC TCGAGTTCTACCTGGTCGACATGAACAAGGACCCCGACCTGCCGCTGCGTCCGCCGGTCGGCCGCACGGGCCGCCCCGAA ACGGGCCGCCAGTCGTATTCGATCGAGGCCGTCAACGAATTCGATCCGCTGTTCGAGGACATCTACGAGTACTGCGAAGC GCAGAACCTCGACATCGACACGCTGATCCACGAAGTCGGCGCCGCGCAGATGGAGATCAACTTCATGCACGGCGACGCGC TGTCGCTGGCCGACCAGGTGTTCCTGTTCAAGCGCACGGTGCGCGAGGCCGCGCTGCGTCACAACATGTACGCGACGTTC ATGGCCAAGCCGATGGAAGACGAACCGGGCTCGGCGATGCACGTGCACCAGAGCATCGTCGACGAGGAAACGGGGCAGAA CCTGTTCACGTCGCCGGAGACCGGCGGCGCGACGTCGATGTTCTACAACTACCTCGCGGGGCTGCAGAAGTACACGCCGG CGCTGATGCCGATCTTCGCGCCTTACATCAATTCGTACCGCCGCCTGTCGCGCTTCATGGCCGCGCCGATCAACGTGCAG TGGGGCTACGACAACCGCACGGTGGGGTTCCGCATTCCGCATTCGGGCCCGGCCGCGCGCCGCATCGAAAACCGCATCCC GGGTGTCGACTGCAACCCGTACCTCGCGCTCGCGGCGACGCTCGCGGCCGGCTATCTCGGCATGACGCAGCGCCTGGAGC CGACCGAGCCGCTGGTGAGCGACGGCTACAGCCTGCCGTACCAGCTGCCGCGCAACCTCGAGGAAGGGCTGACGCTGATG GCCGCGTGCGAGCCGCTCGGCGAGATCCTCGGGCCCAAGTTCCTCAAGGCGTATTTCGCGCTGAAGGAAACCGAATACGA AGCGTTCTTCCGCGTGATCAGCTCGTGGGAACGCCGCCATCTGCTGCTGCACGTTTAA
Upstream 100 bases:
>100_bases GCATTCGGCGATGCCTGCCGCGCCCGCCGCGCCGCCCGCACGCGCGCCATGGCCGCCGCCGCGCTCGCCTGAGCGCGCCC ACCAGACAACGAGAACAGAC
Downstream 100 bases:
>100_bases GCGTGCCAACCGCATACGGAATCACGGAGGAAACATGACTTACCGCAACGAATCTGCCTGGGTCCAGCCGGCCGCGCCGA GCGCCGCGGCCGCCGCGCCG
Product: glutamate--ammonia ligase
Products: NA
Alternate protein names: Gamma-Glu-Put synthetase; Glutamate--putrescine ligase [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MQDIEDFLKQHRITEVEAIIPDMAGIARGKITPRNKFTSGESMRLPQAVMVQTVTGEYPEDGSLTGVTDPDMVCVPDTST IRLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDLYKAKGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRPE TGRQSYSIEAVNEFDPLFEDIYEYCEAQNLDIDTLIHEVGAAQMEINFMHGDALSLADQVFLFKRTVREAALRHNMYATF MAKPMEDEPGSAMHVHQSIVDEETGQNLFTSPETGGATSMFYNYLAGLQKYTPALMPIFAPYINSYRRLSRFMAAPINVQ WGYDNRTVGFRIPHSGPAARRIENRIPGVDCNPYLALAATLAAGYLGMTQRLEPTEPLVSDGYSLPYQLPRNLEEGLTLM AACEPLGEILGPKFLKAYFALKETEYEAFFRVISSWERRHLLLHV
Sequences:
>Translated_445_residues MQDIEDFLKQHRITEVEAIIPDMAGIARGKITPRNKFTSGESMRLPQAVMVQTVTGEYPEDGSLTGVTDPDMVCVPDTST IRLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDLYKAKGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRPE TGRQSYSIEAVNEFDPLFEDIYEYCEAQNLDIDTLIHEVGAAQMEINFMHGDALSLADQVFLFKRTVREAALRHNMYATF MAKPMEDEPGSAMHVHQSIVDEETGQNLFTSPETGGATSMFYNYLAGLQKYTPALMPIFAPYINSYRRLSRFMAAPINVQ WGYDNRTVGFRIPHSGPAARRIENRIPGVDCNPYLALAATLAAGYLGMTQRLEPTEPLVSDGYSLPYQLPRNLEEGLTLM AACEPLGEILGPKFLKAYFALKETEYEAFFRVISSWERRHLLLHV >Mature_445_residues MQDIEDFLKQHRITEVEAIIPDMAGIARGKITPRNKFTSGESMRLPQAVMVQTVTGEYPEDGSLTGVTDPDMVCVPDTST IRLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDLYKAKGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRPE TGRQSYSIEAVNEFDPLFEDIYEYCEAQNLDIDTLIHEVGAAQMEINFMHGDALSLADQVFLFKRTVREAALRHNMYATF MAKPMEDEPGSAMHVHQSIVDEETGQNLFTSPETGGATSMFYNYLAGLQKYTPALMPIFAPYINSYRRLSRFMAAPINVQ WGYDNRTVGFRIPHSGPAARRIENRIPGVDCNPYLALAATLAAGYLGMTQRLEPTEPLVSDGYSLPYQLPRNLEEGLTLM AACEPLGEILGPKFLKAYFALKETEYEAFFRVISSWERRHLLLHV
Specific function: Involved in the breakdown of putrescine via the biosynthesis of gamma-L-glutamylputrescine [H]
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=447, Percent_Identity=27.2930648769575, Blast_Score=151, Evalue=1e-36, Organism=Escherichia coli, GI87081870, Length=451, Percent_Identity=34.1463414634146, Blast_Score=234, Evalue=8e-63, Organism=Escherichia coli, GI1790301, Length=439, Percent_Identity=27.5626423690205, Blast_Score=138, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.11 [H]
Molecular weight: Translated: 50131; Mature: 50131
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDIEDFLKQHRITEVEAIIPDMAGIARGKITPRNKFTSGESMRLPQAVMVQTVTGEYPE CCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC DGSLTGVTDPDMVCVPDTSTIRLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDL CCCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH YKAKGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRPETGRQSYSIEAVNEFDPLFED HHCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH IYEYCEAQNLDIDTLIHEVGAAQMEINFMHGDALSLADQVFLFKRTVREAALRHNMYATF HHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKPMEDEPGSAMHVHQSIVDEETGQNLFTSPETGGATSMFYNYLAGLQKYTPALMPIFA HCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH PYINSYRRLSRFMAAPINVQWGYDNRTVGFRIPHSGPAARRIENRIPGVDCNPYLALAAT HHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHH LAAGYLGMTQRLEPTEPLVSDGYSLPYQLPRNLEEGLTLMAACEPLGEILGPKFLKAYFA HHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH LKETEYEAFFRVISSWERRHLLLHV HHHHHHHHHHHHHHHHHHCEEEEEC >Mature Secondary Structure MQDIEDFLKQHRITEVEAIIPDMAGIARGKITPRNKFTSGESMRLPQAVMVQTVTGEYPE CCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC DGSLTGVTDPDMVCVPDTSTIRLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDL CCCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH YKAKGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRPETGRQSYSIEAVNEFDPLFED HHCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH IYEYCEAQNLDIDTLIHEVGAAQMEINFMHGDALSLADQVFLFKRTVREAALRHNMYATF HHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKPMEDEPGSAMHVHQSIVDEETGQNLFTSPETGGATSMFYNYLAGLQKYTPALMPIFA HCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH PYINSYRRLSRFMAAPINVQWGYDNRTVGFRIPHSGPAARRIENRIPGVDCNPYLALAAT HHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHH LAAGYLGMTQRLEPTEPLVSDGYSLPYQLPRNLEEGLTLMAACEPLGEILGPKFLKAYFA HHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH LKETEYEAFFRVISSWERRHLLLHV HHHHHHHHHHHHHHHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]