| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690997
Identifier: 116690997
GI number: 116690997
Start: 3292126
End: 3292530
Strand: Direct
Name: 116690997
Synonym: Bcen2424_2979
Alternate gene names: NA
Gene position: 3292126-3292530 (Clockwise)
Preceding gene: 116690996
Following gene: 116690998
Centisome position: 94.5
GC content: 64.69
Gene sequence:
>405_bases ATGTTTTCCGCTCTCCTGCACCCCCGCCTCGCGGATTGCCGCAGGCTCTACCTGCGCGACTACGAGGTGCACATCAACAT CGGGGCCTTCGAACACGAGAAGCGCGGCGAGCAACGCGTCGTCATCAACATCGACCTGTTCGTGCCGCTCGCGCTGTCCA CCCCGGTCGACGACCGGCTGCACGAAGTCGTCGACTACGACCTGATGAAGCAGAGCGTCGCGCAGAGCCTGGCGCGCGGC CACATCCACCTGCAGGAAACGCTGTGCGATTCGATCGCCGCGCACCTGCTGGCGCACGATACCGTGCGCGCGGTACGTGT CCGTACCGAGAAACCGGACGCCTATCCGGACTGCGACGCCGTCGGCGTCGAAGTCTTTCGCATCAAGGACGAGGAGCGCC AATGA
Upstream 100 bases:
>100_bases TGCCGCCCGCCGCCGGCCCGAATGAACCGCGCGGGTGCGGCCTGAGCGCCGCCGCCCGCGCCGCTTTGCGTGCGCGCACG CCAATTTGACTGGGACGACC
Downstream 100 bases:
>100_bases ACGCCCCCCACATGAACGACACGGCGGCCGACGCCGCCACGCTGGACGACGCCGCCGCGCCGGCCGGCCGCCCCGCGCTG ACGCGCCGCGAGCAGAAGGA
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: Dihydroneopterin Aldolase Family Protein; Dihydroneopterin Aldolase Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQSLARG HIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERQ
Sequences:
>Translated_134_residues MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQSLARG HIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERQ >Mature_134_residues MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQSLARG HIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERQ
Specific function: Unknown
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15412; Mature: 15412
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRL CCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHH HEVVDYDLMKQSVAQSLARGHIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC VGVEVFRIKDEERQ CCEEEEEECCCCCC >Mature Secondary Structure MFSALLHPRLADCRRLYLRDYEVHINIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRL CCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHH HEVVDYDLMKQSVAQSLARGHIHLQETLCDSIAAHLLAHDTVRAVRVRTEKPDAYPDCDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC VGVEVFRIKDEERQ CCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA