| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690928
Identifier: 116690928
GI number: 116690928
Start: 3214412
End: 3215149
Strand: Reverse
Name: 116690928
Synonym: Bcen2424_2910
Alternate gene names: NA
Gene position: 3215149-3214412 (Counterclockwise)
Preceding gene: 116690929
Following gene: 116690927
Centisome position: 92.29
GC content: 73.17
Gene sequence:
>738_bases ATGACGACCGATGCCTCCGGCGCCAACCCTTTCGCCGGCTTTGCCGGGTTCCAGCCCGCCGACATGATGGACCGGATGTG GGACATGATGCGGATGTCGCCGTTCGGCGGGATGGCGCCGTTTCCGGGCGCCACGCACGGGCTGCCGCCGTCGCTGTCGA GCATGTCCGACATGATGTCGCCGCTCACGAACGTCGAGGAGCTCGACAAGCGGATCACCGATCTGCGCGCGGTCGAGCAA TGGCTGAAGCTCAATCTCGGGATGCTGCAGTCCGCGATCCAGGCGCTCGAGGTGCAGCGCGCGACGCTCGCGACGCTGCG TGCATTCGGCGCGTTCGCGCAAAGCTCGATGTCGGCGGCCGAGGAAGCGGCCGTGGCCGCCGCGCAGGCCGCGAAACCCG CGTCGGCGGGCGAGGCCGCACCCGATGCCGCGGCGTCCGCGGCGGATGCGCCGGCGGGCGACCCCGCGCAGCAGTTCGAC CCGGCCGGCTGGTGGAACCTGCTGCAGACGCAATTCAATCAGCTCGCGAGCCTCGCGATGGCGCAGCCGGGCATGCAGCC TGCCGCGCCGGACGCCGCGCCGCCGGAGGCCGCCACCGCGCCGGAGCCCGCCGCGAAATCCGCCGCGGCCGCACCGCGCA AGCCCGCCGCGAAGCGTGCGAAGCCGTCCGGTTCGGCCGCGGAGCGCGCGGCGGCCGCTTCGTCGCCCGAAACGCGTCCG CCGAAGCGCTCGACGTGA
Upstream 100 bases:
>100_bases CGGCGACGCGCCGTTCTGACGTGCGCGCTATGATCGAACCACGCGCGGCTGCGCGACGCACAGCGGCCGCCTCGCTCCCC CAGTCAACCAGGATGCCCGT
Downstream 100 bases:
>100_bases TGCGGCGCAGGTAGCAGGTCGATCATGCGACTCGCGCTCGTTCTGATGGGAGGCGGCGCGCGCGCCGCATACCAGGTCGG CGTGCTGAAGGCGCTGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTTDASGANPFAGFAGFQPADMMDRMWDMMRMSPFGGMAPFPGATHGLPPSLSSMSDMMSPLTNVEELDKRITDLRAVEQ WLKLNLGMLQSAIQALEVQRATLATLRAFGAFAQSSMSAAEEAAVAAAQAAKPASAGEAAPDAAASAADAPAGDPAQQFD PAGWWNLLQTQFNQLASLAMAQPGMQPAAPDAAPPEAATAPEPAAKSAAAAPRKPAAKRAKPSGSAAERAAAASSPETRP PKRST
Sequences:
>Translated_245_residues MTTDASGANPFAGFAGFQPADMMDRMWDMMRMSPFGGMAPFPGATHGLPPSLSSMSDMMSPLTNVEELDKRITDLRAVEQ WLKLNLGMLQSAIQALEVQRATLATLRAFGAFAQSSMSAAEEAAVAAAQAAKPASAGEAAPDAAASAADAPAGDPAQQFD PAGWWNLLQTQFNQLASLAMAQPGMQPAAPDAAPPEAATAPEPAAKSAAAAPRKPAAKRAKPSGSAAERAAAASSPETRP PKRST >Mature_244_residues TTDASGANPFAGFAGFQPADMMDRMWDMMRMSPFGGMAPFPGATHGLPPSLSSMSDMMSPLTNVEELDKRITDLRAVEQW LKLNLGMLQSAIQALEVQRATLATLRAFGAFAQSSMSAAEEAAVAAAQAAKPASAGEAAPDAAASAADAPAGDPAQQFDP AGWWNLLQTQFNQLASLAMAQPGMQPAAPDAAPPEAATAPEPAAKSAAAAPRKPAAKRAKPSGSAAERAAAASSPETRPP KRST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25119; Mature: 24988
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDASGANPFAGFAGFQPADMMDRMWDMMRMSPFGGMAPFPGATHGLPPSLSSMSDMMS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH PLTNVEELDKRITDLRAVEQWLKLNLGMLQSAIQALEVQRATLATLRAFGAFAQSSMSAA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAAVAAAQAAKPASAGEAAPDAAASAADAPAGDPAQQFDPAGWWNLLQTQFNQLASLAM HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH AQPGMQPAAPDAAPPEAATAPEPAAKSAAAAPRKPAAKRAKPSGSAAERAAAASSPETRP HCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCC PKRST CCCCC >Mature Secondary Structure TTDASGANPFAGFAGFQPADMMDRMWDMMRMSPFGGMAPFPGATHGLPPSLSSMSDMMS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH PLTNVEELDKRITDLRAVEQWLKLNLGMLQSAIQALEVQRATLATLRAFGAFAQSSMSAA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAAVAAAQAAKPASAGEAAPDAAASAADAPAGDPAQQFDPAGWWNLLQTQFNQLASLAM HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH AQPGMQPAAPDAAPPEAATAPEPAAKSAAAAPRKPAAKRAKPSGSAAERAAAASSPETRP HCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCC PKRST CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA