| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is tauA [H]
Identifier: 116690904
GI number: 116690904
Start: 3190338
End: 3191354
Strand: Reverse
Name: tauA [H]
Synonym: Bcen2424_2886
Alternate gene names: 116690904
Gene position: 3191354-3190338 (Counterclockwise)
Preceding gene: 116690905
Following gene: 116690903
Centisome position: 91.6
GC content: 68.73
Gene sequence:
>1017_bases ATGTCCCGTTTCAGCTTCATCCGCCGCGCCGTCGTCGCGTTGACCGCCTTTGCCGCGCTCGGCGCGGCGCACGCCGAATC GCGCGAAGTCGTGATCGCGTACCAGGACATGGTCGTGCCGTGGCGCTACGCGCAGGCGAGCGGTGAAGTCGAAAAGGCGA CCGGCTACAAGGTCACGTTCCGCAAGCTCGACAGCGGCGCCGACGTGATCCGCGCGCTCGCGTCGGGCTCCGTGCAGCTT GGCGAAGCCGGGTCGAGCCCGATCGCGGCCGGCCTGTCGCAGGGGCTCGACATCTCGCTGTTCTGGGTGCTCGACAACAT CAACGACGCCGAGGCGCTCGTCGCGCGCAATGGTTCGGGCGTGACCAGCATCGCCGCGCTCAAGGGCAAGAAGATCGGCG TGCCGTTCGTGTCGACGTCGCATTTCCATACGCTCGTCGCGCTGCAGGCCGCGGGCGTCAATCCGAACGACGTGAAGATC GTCAACCTGCGTCCGCCCGAAGTCGCCGCCGCATGGACGCGCGGCGACATCGACGCGACCTATATCTGGGACCCGGTGCT CGCGAAGGTCAAGCAGTCGGGCACCGTGCTGACGACGTCCGGCCAGGTTGCGAAAGAAAGTGGCAAGGCGACCTTCGACG GCTTCGTCGTGAGCCGCAAGTTCGCGCGCGAGAACCCCGAGTTCGTCACGCGCTTCGTGAAGGTGCTCGCGGCGGCGGAC GCCGACTACCGCGCGCACGCGGCGGCGTGGAAGGTCGGCTCGCCGCAGGTCGCGGCGGTCGCGAAGGTGTCCGGCGCGAA CGCGCAGGACGTGCCGGCCAGCCTCGCGCTCTACGCATTCCCGACGGCGGCCGAACAGGCATCGCCGACGTGGCTCGGCG GCGGCGCGCAATCGGGCGCCGTGAAGTCGCTCGCGGCCACGGCCACGTTCCTCAAATCGCAAGGCACGATCCAGACGGTG CTGTCCGACTATTCGGTCGGCGTCGATCCGCAGTTCGTGCAGAAGGCCGCGCGCTGA
Upstream 100 bases:
>100_bases CGGCATCGATAGCTTCGCAGGATAAGTTCGCTCCCGCCGCGCGCAAAGCCCGTAAAGTCGGCTCTCCCGCAGCAATGCCC GCATTCCGAAGGAGAGCCGC
Downstream 100 bases:
>100_bases GCGCGGCCACTCAGCCCACTCATCGCGGAGGCCTTCGATCATGAGCACGCTGGAAGTCCGCCAGGTATCGGTTGCCTATC CGGGCGAGCGCGGCAGGCCG
Product: taurine ABC transporter, periplasmic binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSRFSFIRRAVVALTAFAALGAAHAESREVVIAYQDMVVPWRYAQASGEVEKATGYKVTFRKLDSGADVIRALASGSVQL GEAGSSPIAAGLSQGLDISLFWVLDNINDAEALVARNGSGVTSIAALKGKKIGVPFVSTSHFHTLVALQAAGVNPNDVKI VNLRPPEVAAAWTRGDIDATYIWDPVLAKVKQSGTVLTTSGQVAKESGKATFDGFVVSRKFARENPEFVTRFVKVLAAAD ADYRAHAAAWKVGSPQVAAVAKVSGANAQDVPASLALYAFPTAAEQASPTWLGGGAQSGAVKSLAATATFLKSQGTIQTV LSDYSVGVDPQFVQKAAR
Sequences:
>Translated_338_residues MSRFSFIRRAVVALTAFAALGAAHAESREVVIAYQDMVVPWRYAQASGEVEKATGYKVTFRKLDSGADVIRALASGSVQL GEAGSSPIAAGLSQGLDISLFWVLDNINDAEALVARNGSGVTSIAALKGKKIGVPFVSTSHFHTLVALQAAGVNPNDVKI VNLRPPEVAAAWTRGDIDATYIWDPVLAKVKQSGTVLTTSGQVAKESGKATFDGFVVSRKFARENPEFVTRFVKVLAAAD ADYRAHAAAWKVGSPQVAAVAKVSGANAQDVPASLALYAFPTAAEQASPTWLGGGAQSGAVKSLAATATFLKSQGTIQTV LSDYSVGVDPQFVQKAAR >Mature_337_residues SRFSFIRRAVVALTAFAALGAAHAESREVVIAYQDMVVPWRYAQASGEVEKATGYKVTFRKLDSGADVIRALASGSVQLG EAGSSPIAAGLSQGLDISLFWVLDNINDAEALVARNGSGVTSIAALKGKKIGVPFVSTSHFHTLVALQAAGVNPNDVKIV NLRPPEVAAAWTRGDIDATYIWDPVLAKVKQSGTVLTTSGQVAKESGKATFDGFVVSRKFARENPEFVTRFVKVLAAADA DYRAHAAAWKVGSPQVAAVAKVSGANAQDVPASLALYAFPTAAEQASPTWLGGGAQSGAVKSLAATATFLKSQGTIQTVL SDYSVGVDPQFVQKAAR
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=328, Percent_Identity=38.719512195122, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI87081803, Length=245, Percent_Identity=27.3469387755102, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 35296; Mature: 35165
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFSFIRRAVVALTAFAALGAAHAESREVVIAYQDMVVPWRYAQASGEVEKATGYKVTF CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEECCEEECCCCCCEECCCCCEEEE RKLDSGADVIRALASGSVQLGEAGSSPIAAGLSQGLDISLFWVLDNINDAEALVARNGSG EECCCHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHEECCCCC VTSIAALKGKKIGVPFVSTSHFHTLVALQAAGVNPNDVKIVNLRPPEVAAAWTRGDIDAT CEEEEEECCCCCCCCEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEE YIWDPVLAKVKQSGTVLTTSGQVAKESGKATFDGFVVSRKFARENPEFVTRFVKVLAAAD EEHHHHHHHHHCCCCEEEECCCHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCC ADYRAHAAAWKVGSPQVAAVAKVSGANAQDVPASLALYAFPTAAEQASPTWLGGGAQSGA CCCHHHHHEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCH VKSLAATATFLKSQGTIQTVLSDYSVGVDPQFVQKAAR HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure SRFSFIRRAVVALTAFAALGAAHAESREVVIAYQDMVVPWRYAQASGEVEKATGYKVTF CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEECCEEECCCCCCEECCCCCEEEE RKLDSGADVIRALASGSVQLGEAGSSPIAAGLSQGLDISLFWVLDNINDAEALVARNGSG EECCCHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHEECCCCC VTSIAALKGKKIGVPFVSTSHFHTLVALQAAGVNPNDVKIVNLRPPEVAAAWTRGDIDAT CEEEEEECCCCCCCCEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEE YIWDPVLAKVKQSGTVLTTSGQVAKESGKATFDGFVVSRKFARENPEFVTRFVKVLAAAD EEHHHHHHHHHCCCCEEEECCCHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCC ADYRAHAAAWKVGSPQVAAVAKVSGANAQDVPASLALYAFPTAAEQASPTWLGGGAQSGA CCCHHHHHEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCH VKSLAATATFLKSQGTIQTVLSDYSVGVDPQFVQKAAR HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]